RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 METTL22Q9BUU2 404 aaPredicted RBP14.53□□□□□ -0.08
RNF4-218ENST00000513284 LEMD3Q9Y2U8 911 aa14.53□□□□□ -0.08
RNF4-218ENST00000513284 COL1A1P02452 1464 aaPredicted RBP14.52□□□□□ -0.08
RNF4-218ENST00000513284 ZNF804BA4D1E1 1349 aa14.52□□□□□ -0.08
RNF4-218ENST00000513284 IRS2Q9Y4H2 1338 aa14.52□□□□□ -0.08
RNF4-218ENST00000513284 CLRN2A0PK11 232 aa14.52□□□□□ -0.09
RNF4-218ENST00000513284 IGKV5-2P06315 115 aa14.52□□□□□ -0.09
RNF4-218ENST00000513284 SUPT20HL1Q3ZLR7 823 aa14.52□□□□□ -0.09
RNF4-218ENST00000513284 SHISA4Q96DD7 197 aa14.52□□□□□ -0.09
RNF4-218ENST00000513284 CDC5LQ99459 802 aaKnown RBP14.52□□□□□ -0.09
RNF4-218ENST00000513284 ARHGAP39Q9C0H5 1083 aa14.52□□□□□ -0.09
RNF4-218ENST00000513284 PPP2R3BQ9Y5P8 575 aa14.52□□□□□ -0.09
RNF4-218ENST00000513284 SNAP23O00161 211 aa14.51□□□□□ -0.09
RNF4-218ENST00000513284 GOLGA2Q08379 1002 aa14.51□□□□□ -0.09
RNF4-218ENST00000513284 CCDC146Q8IYE0 955 aa14.51□□□□□ -0.09
RNF4-218ENST00000513284 ANKRD13AQ8IZ07 590 aa14.51□□□□□ -0.09
RNF4-218ENST00000513284 OPTNQ96CV9 577 aa14.51□□□□□ -0.09
RNF4-218ENST00000513284 ELP3Q9H9T3 547 aa14.51□□□□□ -0.09
RNF4-218ENST00000513284 CD209Q9NNX6 404 aa14.51□□□□□ -0.09
RNF4-218ENST00000513284 IREB2P48200 963 aaKnown RBP14.5□□□□□ -0.09
RNF4-218ENST00000513284 RASA3Q14644 834 aa14.5□□□□□ -0.09
RNF4-218ENST00000513284 MTFR1Q15390 333 aa14.5□□□□□ -0.09
RNF4-218ENST00000513284 CFAP100Q494V2 611 aa14.5□□□□□ -0.09
RNF4-218ENST00000513284 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.5□□□□□ -0.09
RNF4-218ENST00000513284 UBE2Q1Q7Z7E8 422 aa14.5□□□□□ -0.09
RNF4-218ENST00000513284 CDAN1Q8IWY9 1227 aa14.5□□□□□ -0.09
RNF4-218ENST00000513284 FAM43AQ8N2R8 423 aa14.5□□□□□ -0.09
RNF4-218ENST00000513284 MBIPQ9NS73 344 aa14.5□□□□□ -0.09
RNF4-218ENST00000513284 LAMA3Q16787 3333 aa14.49□□□□□ -0.09
RNF4-218ENST00000513284 SPDYE2BA6NHP3 402 aa14.49□□□□□ -0.09
RNF4-218ENST00000513284 ELL2O00472 640 aaPredicted RBP14.49□□□□□ -0.09
RNF4-218ENST00000513284 ZNF853P0CG23 659 aa14.49□□□□□ -0.09
RNF4-218ENST00000513284 SPDYE6P0CI01 402 aa14.49□□□□□ -0.09
RNF4-218ENST00000513284 DPF3Q92784 378 aa14.49□□□□□ -0.09
RNF4-218ENST00000513284 ZSWIM8A7E2V4 1837 aa14.49□□□□□ -0.09
RNF4-218ENST00000513284 SPEF2Q9C093 1822 aa14.48□□□□□ -0.09
RNF4-218ENST00000513284 F8W031 263 aaPredicted RBP14.48□□□□□ -0.09
RNF4-218ENST00000513284 SOX1O00570 391 aaPredicted RBP14.48□□□□□ -0.09
RNF4-218ENST00000513284 CTGFP29279 349 aa14.48□□□□□ -0.09
RNF4-218ENST00000513284 TAF1CQ15572 869 aaPredicted RBP14.48□□□□□ -0.09
RNF4-218ENST00000513284 TEPSINQ96N21 525 aa14.48□□□□□ -0.09
RNF4-218ENST00000513284 ZFYVE28Q9HCC9 887 aa14.48□□□□□ -0.09
RNF4-218ENST00000513284 CCL15-CCL14A0A0B4J2E2 113 aa14.47□□□□□ -0.09
RNF4-218ENST00000513284 H7C1W4 665 aa14.47□□□□□ -0.09
RNF4-218ENST00000513284 CCL15Q16663 113 aa14.47□□□□□ -0.09
RNF4-218ENST00000513284 VEZTQ9HBM0 779 aa14.47□□□□□ -0.09
RNF4-218ENST00000513284 MAP3K2Q9Y2U5 619 aa14.47□□□□□ -0.09
RNF4-218ENST00000513284 LACTBP83111 547 aaPredicted RBP14.46□□□□□ -0.09
RNF4-218ENST00000513284 ARHGEF6Q15052 776 aa14.46□□□□□ -0.09
RNF4-218ENST00000513284 C8orf58Q8NAV2 365 aa14.46□□□□□ -0.09
RNF4-218ENST00000513284 ANKRD2Q9GZV1 360 aa14.46□□□□□ -0.09
RNF4-218ENST00000513284 TLR2O60603 784 aa14.45□□□□□ -0.1
RNF4-218ENST00000513284 IL1R1P14778 569 aa14.45□□□□□ -0.1
RNF4-218ENST00000513284 CHRNDQ07001 517 aa14.45□□□□□ -0.1
RNF4-218ENST00000513284 CWF19L2Q2TBE0 894 aaKnown RBP14.45□□□□□ -0.1
RNF4-218ENST00000513284 C15orf52Q6ZUT6 534 aaKnown RBP14.45□□□□□ -0.1
RNF4-218ENST00000513284 LRCH3Q96II8 777 aa14.45□□□□□ -0.1
RNF4-218ENST00000513284 JAG2Q9Y219 1238 aa14.45□□□□□ -0.1
RNF4-218ENST00000513284 OTOFQ9HC10 1997 aa14.45□□□□□ -0.1
RNF4-218ENST00000513284 ECM29Q5VYK3 1845 aa14.45□□□□□ -0.1
RNF4-218ENST00000513284 PI4KAP2A4QPH2 592 aa14.44□□□□□ -0.1
RNF4-218ENST00000513284 TAF5LO75529 589 aa14.44□□□□□ -0.1
RNF4-218ENST00000513284 CSF1RP07333 972 aa14.44□□□□□ -0.1
RNF4-218ENST00000513284 ITGA6P23229 1130 aa14.44□□□□□ -0.1
RNF4-218ENST00000513284 IGHMBP2P38935 993 aaKnown RBP14.44□□□□□ -0.1
RNF4-218ENST00000513284 GTF2A2P52657 109 aa14.44□□□□□ -0.1
RNF4-218ENST00000513284 CASP7P55210 303 aa14.44□□□□□ -0.1
RNF4-218ENST00000513284 FKBP1AP62942 108 aaKnown RBP14.44□□□□□ -0.1
RNF4-218ENST00000513284 MAP3K9P80192 1104 aa14.44□□□□□ -0.1
RNF4-218ENST00000513284 VGLL4Q14135 290 aa14.44□□□□□ -0.1
RNF4-218ENST00000513284 PI4KAP1Q8N8J0 262 aa14.44□□□□□ -0.1
RNF4-218ENST00000513284 HELBQ8NG08 1087 aaPredicted RBP14.44□□□□□ -0.1
RNF4-218ENST00000513284 ZNF70Q9UC06 446 aaPredicted RBP14.44□□□□□ -0.1
RNF4-218ENST00000513284 CUL9Q8IWT3 2517 aa14.43□□□□□ -0.1
RNF4-218ENST00000513284 NEURL1BA8MQ27 555 aa14.43□□□□□ -0.1
RNF4-218ENST00000513284 BTBD19C9JJ37 291 aa14.43□□□□□ -0.1
RNF4-218ENST00000513284 ZBTB7BO15156 539 aaPredicted RBP14.43□□□□□ -0.1
RNF4-218ENST00000513284 MYO1BO43795 1136 aa14.43□□□□□ -0.1
RNF4-218ENST00000513284 ECM2O94769 699 aaPredicted RBP14.43□□□□□ -0.1
RNF4-218ENST00000513284 GJA8P48165 433 aa14.43□□□□□ -0.1
RNF4-218ENST00000513284 SPDYE2Q495Y8 402 aa14.43□□□□□ -0.1
RNF4-218ENST00000513284 C17orf99Q6UX52 265 aa14.43□□□□□ -0.1
RNF4-218ENST00000513284 KSR2Q6VAB6 950 aa14.43□□□□□ -0.1
RNF4-218ENST00000513284 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.43□□□□□ -0.1
RNF4-218ENST00000513284 RUNDC1Q96C34 613 aa14.43□□□□□ -0.1
RNF4-218ENST00000513284 TDRD3Q9H7E2 651 aaKnown RBP14.43□□□□□ -0.1
RNF4-218ENST00000513284 UBE3BQ7Z3V4 1068 aa14.42□□□□□ -0.1
RNF4-218ENST00000513284 TRIM47Q96LD4 638 aa14.42□□□□□ -0.1
RNF4-218ENST00000513284 PLA2G12BQ9BX93 195 aa14.42□□□□□ -0.1
RNF4-218ENST00000513284 TMEM39BQ9GZU3 492 aa14.42□□□□□ -0.1
RNF4-218ENST00000513284 MYH3P11055 1940 aa14.42□□□□□ -0.1
RNF4-218ENST00000513284 DDX58O95786 925 aaKnown RBP14.41□□□□□ -0.1
RNF4-218ENST00000513284 GJB1P08034 283 aa14.41□□□□□ -0.1
RNF4-218ENST00000513284 PRMT2P55345 433 aa14.41□□□□□ -0.1
RNF4-218ENST00000513284 MPHOSPH8Q99549 860 aa14.41□□□□□ -0.1
RNF4-218ENST00000513284 SRRDQ9UH36 339 aa14.41□□□□□ -0.1
RNF4-218ENST00000513284 ADAMTS8Q9UP79 889 aa14.41□□□□□ -0.1
RNF4-218ENST00000513284 UNC80Q8N2C7 3258 aa14.41□□□□□ -0.1
RNF4-218ENST00000513284 SPDYE5A6NIY4 337 aa14.4□□□□□ -0.1
RNF4-218ENST00000513284 GNRH1P01148 92 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms