RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 ANKRD34AQ69YU3 496 aa10.19□□□□□ -0.78
NUP54-209ENST00000510569 GLYCTKQ8IVS8 523 aa10.19□□□□□ -0.78
NUP54-209ENST00000510569 SLC7A3Q8WY07 619 aa10.19□□□□□ -0.78
NUP54-209ENST00000510569 MYRFLQ96LU7 910 aa10.19□□□□□ -0.78
NUP54-209ENST00000510569 SOX17Q9H6I2 414 aaPredicted RBP10.19□□□□□ -0.78
NUP54-209ENST00000510569 SOX1O00570 391 aaPredicted RBP10.18□□□□□ -0.78
NUP54-209ENST00000510569 GSC2O15499 205 aa10.18□□□□□ -0.78
NUP54-209ENST00000510569 NLRP12P59046 1061 aa10.18□□□□□ -0.78
NUP54-209ENST00000510569 IKBKEQ14164 716 aa10.18□□□□□ -0.78
NUP54-209ENST00000510569 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.17□□□□□ -0.78
NUP54-209ENST00000510569 TXNDC2Q86VQ3 553 aa10.17□□□□□ -0.78
NUP54-209ENST00000510569 GALNT12Q8IXK2 581 aa10.17□□□□□ -0.78
NUP54-209ENST00000510569 STOML1Q9UBI4 398 aa10.17□□□□□ -0.78
NUP54-209ENST00000510569 BRPF3Q9ULD4 1205 aa10.17□□□□□ -0.78
NUP54-209ENST00000510569 MEGF11A6BM72 1044 aa10.16□□□□□ -0.78
NUP54-209ENST00000510569 IGLV1-40P01703 118 aa10.16□□□□□ -0.78
NUP54-209ENST00000510569 RETREG2Q8NC44 543 aa10.16□□□□□ -0.78
NUP54-209ENST00000510569 ASAP3Q8TDY4 903 aa10.16□□□□□ -0.78
NUP54-209ENST00000510569 RUSC1Q9BVN2 902 aa10.16□□□□□ -0.78
NUP54-209ENST00000510569 ESRRAP11474 423 aaPredicted RBP10.15□□□□□ -0.78
NUP54-209ENST00000510569 PREPP48147 710 aa10.15□□□□□ -0.78
NUP54-209ENST00000510569 FAM129BQ96TA1 746 aa10.15□□□□□ -0.78
NUP54-209ENST00000510569 NDUFB5O43674 189 aa10.14□□□□□ -0.79
NUP54-209ENST00000510569 POLR3DP05423 398 aaPredicted RBP10.14□□□□□ -0.79
NUP54-209ENST00000510569 CCNJLQ8IV13 435 aa10.14□□□□□ -0.79
NUP54-209ENST00000510569 FAM20CQ8IXL6 584 aa10.14□□□□□ -0.79
NUP54-209ENST00000510569 ARID3AQ99856 593 aa10.14□□□□□ -0.79
NUP54-209ENST00000510569 C7orf69Q9H7B7 122 aa10.14□□□□□ -0.79
NUP54-209ENST00000510569 LOC100289279A0A1B0GTE1 492 aa10.13□□□□□ -0.79
NUP54-209ENST00000510569 A0A1W2PP55 124 aa10.13□□□□□ -0.79
NUP54-209ENST00000510569 METTL12A8MUP2 240 aa10.13□□□□□ -0.79
NUP54-209ENST00000510569 NBPF11Q86T75 865 aa10.13□□□□□ -0.79
NUP54-209ENST00000510569 TCF12Q99081 682 aa10.13□□□□□ -0.79
NUP54-209ENST00000510569 TMPRSS13Q9BYE2 586 aa10.13□□□□□ -0.79
NUP54-209ENST00000510569 HIF3AQ9Y2N7 669 aa10.13□□□□□ -0.79
NUP54-209ENST00000510569 EIF4EBP3O60516 100 aaPredicted RBP10.12□□□□□ -0.79
NUP54-209ENST00000510569 CD97P48960 835 aa10.12□□□□□ -0.79
NUP54-209ENST00000510569 PDE4CQ08493 712 aa10.12□□□□□ -0.79
NUP54-209ENST00000510569 NFIAQ12857 509 aa10.12□□□□□ -0.79
NUP54-209ENST00000510569 PDE3BQ13370 1112 aa10.12□□□□□ -0.79
NUP54-209ENST00000510569 FDX2Q6P4F2 183 aa10.12□□□□□ -0.79
NUP54-209ENST00000510569 CITED4Q96RK1 184 aa10.12□□□□□ -0.79
NUP54-209ENST00000510569 NRSN2Q9GZP1 204 aa10.12□□□□□ -0.79
NUP54-209ENST00000510569 SUGCTQ9HAC7 445 aa10.12□□□□□ -0.79
NUP54-209ENST00000510569 SART1O43290 800 aaKnown RBP10.11□□□□□ -0.79
NUP54-209ENST00000510569 NEFLP07196 543 aa10.11□□□□□ -0.79
NUP54-209ENST00000510569 RNF43Q68DV7 783 aa10.11□□□□□ -0.79
NUP54-209ENST00000510569 CLEC10AQ8IUN9 316 aa10.11□□□□□ -0.79
NUP54-209ENST00000510569 TRIM42Q8IWZ5 723 aa10.11□□□□□ -0.79
NUP54-209ENST00000510569 A0A096LPE4 126 aa10.1□□□□□ -0.79
NUP54-209ENST00000510569 A0A1W2PPZ6 126 aa10.1□□□□□ -0.79
NUP54-209ENST00000510569 SUPT5HO00267 1087 aaKnown RBP10.1□□□□□ -0.79
NUP54-209ENST00000510569 IGHA2P01877 340 aa10.1□□□□□ -0.79
NUP54-209ENST00000510569 USPL1Q5W0Q7 1092 aa10.1□□□□□ -0.79
NUP54-209ENST00000510569 ZDHHC13Q8IUH4 622 aa10.1□□□□□ -0.79
NUP54-209ENST00000510569 SMG8Q8ND04 991 aaKnown RBP10.1□□□□□ -0.79
NUP54-209ENST00000510569 FAM83CQ9BQN1 747 aa10.1□□□□□ -0.79
NUP54-209ENST00000510569 DBNDD2Q9BQY9 259 aa10.1□□□□□ -0.79
NUP54-209ENST00000510569 USP26Q9BXU7 913 aa10.1□□□□□ -0.79
NUP54-209ENST00000510569 CLEC4MQ9H2X3 399 aaPredicted RBP10.1□□□□□ -0.79
NUP54-209ENST00000510569 LIN7BQ9HAP6 207 aa10.1□□□□□ -0.79
NUP54-209ENST00000510569 HMX2A2RU54 273 aa10.09□□□□□ -0.79
NUP54-209ENST00000510569 TIAF1O95411 115 aa10.09□□□□□ -0.79
NUP54-209ENST00000510569 BMP3P12645 472 aa10.09□□□□□ -0.79
NUP54-209ENST00000510569 GRIA4P48058 902 aa10.09□□□□□ -0.79
NUP54-209ENST00000510569 KIAA0319Q5VV43 1072 aa10.09□□□□□ -0.79
NUP54-209ENST00000510569 KRTAP4-8Q9BYQ9 185 aa10.09□□□□□ -0.79
NUP54-209ENST00000510569 DLGAP3O95886 979 aa10.08□□□□□ -0.8
NUP54-209ENST00000510569 PCDH1Q08174 1060 aa10.08□□□□□ -0.8
NUP54-209ENST00000510569 ORC1Q13415 861 aa10.08□□□□□ -0.8
NUP54-209ENST00000510569 NUTM2GQ5VZR2 741 aa10.08□□□□□ -0.8
NUP54-209ENST00000510569 BEND4Q6ZU67 534 aa10.08□□□□□ -0.8
NUP54-209ENST00000510569 GPR182O15218 404 aa10.07□□□□□ -0.8
NUP54-209ENST00000510569 CPNE3O75131 537 aaKnown RBP10.07□□□□□ -0.8
NUP54-209ENST00000510569 GSTM4Q03013 218 aa10.07□□□□□ -0.8
NUP54-209ENST00000510569 SPRED3Q2MJR0 410 aa10.07□□□□□ -0.8
NUP54-209ENST00000510569 CYP4F12Q9HCS2 524 aa10.07□□□□□ -0.8
NUP54-209ENST00000510569 PCMTD2Q9NV79 361 aa10.07□□□□□ -0.8
NUP54-209ENST00000510569 KIAA1324LA8MWY0 1029 aaPredicted RBP10.06□□□□□ -0.8
NUP54-209ENST00000510569 GAS2O43903 313 aaKnown RBP10.06□□□□□ -0.8
NUP54-209ENST00000510569 TGFB1P01137 390 aa10.06□□□□□ -0.8
NUP54-209ENST00000510569 ZNF423Q2M1K9 1284 aa10.06□□□□□ -0.8
NUP54-209ENST00000510569 CCER1Q8TC90 406 aaPredicted RBP10.06□□□□□ -0.8
NUP54-209ENST00000510569 SSTR4P31391 388 aa10.05□□□□□ -0.8
NUP54-209ENST00000510569 EXOSC6Q5RKV6 272 aaKnown RBP10.05□□□□□ -0.8
NUP54-209ENST00000510569 RBCK1Q9BYM8 510 aa10.05□□□□□ -0.8
NUP54-209ENST00000510569 DNAJC25Q9H1X3 360 aa10.05□□□□□ -0.8
NUP54-209ENST00000510569 KCNF1Q9H3M0 494 aa10.05□□□□□ -0.8
NUP54-209ENST00000510569 NPHS2Q9NP85 383 aa10.05□□□□□ -0.8
NUP54-209ENST00000510569 COBLO75128 1261 aa10.04□□□□□ -0.8
NUP54-209ENST00000510569 ITPKAP23677 461 aa10.04□□□□□ -0.8
NUP54-209ENST00000510569 SGO2Q562F6 1265 aa10.04□□□□□ -0.8
NUP54-209ENST00000510569 ALKBH8Q96BT7 664 aaKnown RBP10.04□□□□□ -0.8
NUP54-209ENST00000510569 ZNF576Q9H609 170 aa10.04□□□□□ -0.8
NUP54-209ENST00000510569 PRR19A6NJB7 356 aa10.03□□□□□ -0.8
NUP54-209ENST00000510569 MED26O95402 600 aa10.03□□□□□ -0.8
NUP54-209ENST00000510569 B3GALT4O96024 378 aa10.03□□□□□ -0.8
NUP54-209ENST00000510569 MAP4P27816 1152 aaKnown RBP10.03□□□□□ -0.8
NUP54-209ENST00000510569 PRPF40BQ6NWY9 871 aaKnown RBP10.03□□□□□ -0.8
NUP54-209ENST00000510569 DMRTB1Q96MA1 342 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms