RNA–Protein interactions for RNA: ENST00000510131.1

ARHGEF28-209, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5

Gene ARHGEF28, Length 280 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-209ENST00000510131 BEND4Q6ZU67 534 aa8.42□□□□□ -1.06
ARHGEF28-209ENST00000510131 CCDC82Q8N4S0 544 aa8.42□□□□□ -1.06
ARHGEF28-209ENST00000510131 ZKSCAN3Q9BRR0 538 aa8.42□□□□□ -1.06
ARHGEF28-209ENST00000510131 EDN3P14138 238 aa8.41□□□□□ -1.06
ARHGEF28-209ENST00000510131 IKBKEQ14164 716 aa8.41□□□□□ -1.06
ARHGEF28-209ENST00000510131 FOXD3Q9UJU5 478 aaPredicted RBP8.41□□□□□ -1.06
ARHGEF28-209ENST00000510131 MEGF11A6BM72 1044 aa8.4□□□□□ -1.06
ARHGEF28-209ENST00000510131 PRR19A6NJB7 356 aa8.4□□□□□ -1.06
ARHGEF28-209ENST00000510131 PPP1R15AO75807 674 aaPredicted RBP8.4□□□□□ -1.06
ARHGEF28-209ENST00000510131 FAM13AO94988 1023 aa8.4□□□□□ -1.06
ARHGEF28-209ENST00000510131 GRIK1P39086 918 aa8.4□□□□□ -1.06
ARHGEF28-209ENST00000510131 EHHADHQ08426 723 aa8.4□□□□□ -1.06
ARHGEF28-209ENST00000510131 INTS5Q6P9B9 1019 aaKnown RBP8.4□□□□□ -1.06
ARHGEF28-209ENST00000510131 VN1R5Q7Z5H4 357 aa8.4□□□□□ -1.06
ARHGEF28-209ENST00000510131 SNX29Q8TEQ0 813 aa8.4□□□□□ -1.06
ARHGEF28-209ENST00000510131 HIF3AQ9Y2N7 669 aa8.4□□□□□ -1.06
ARHGEF28-209ENST00000510131 GAS2O43903 313 aaKnown RBP8.39□□□□□ -1.07
ARHGEF28-209ENST00000510131 USP5P45974 858 aa8.39□□□□□ -1.07
ARHGEF28-209ENST00000510131 SHKBP1Q8TBC3 707 aa8.39□□□□□ -1.07
ARHGEF28-209ENST00000510131 KRTAP4-12Q9BQ66 201 aa8.39□□□□□ -1.07
ARHGEF28-209ENST00000510131 MTMR7Q9Y216 660 aa8.39□□□□□ -1.07
ARHGEF28-209ENST00000510131 COL17A1Q9UMD9 1497 aaPredicted RBP8.38□□□□□ -1.07
ARHGEF28-209ENST00000510131 FZD6O60353 706 aa8.38□□□□□ -1.07
ARHGEF28-209ENST00000510131 ASAP3Q8TDY4 903 aa8.38□□□□□ -1.07
ARHGEF28-209ENST00000510131 SPINK2P20155 84 aa8.37□□□□□ -1.07
ARHGEF28-209ENST00000510131 GP2P55259 537 aaKnown RBP8.37□□□□□ -1.07
ARHGEF28-209ENST00000510131 FKBP4Q02790 459 aaKnown RBP eCLIP8.37□□□□□ -1.07
ARHGEF28-209ENST00000510131 SF3B2Q13435 895 aaKnown RBP8.37□□□□□ -1.07
ARHGEF28-209ENST00000510131 NUTM2GQ5VZR2 741 aa8.37□□□□□ -1.07
ARHGEF28-209ENST00000510131 PHLDB3Q6NSJ2 640 aa8.37□□□□□ -1.07
ARHGEF28-209ENST00000510131 C12orf50Q8NA57 414 aaPredicted RBP8.37□□□□□ -1.07
ARHGEF28-209ENST00000510131 USP26Q9BXU7 913 aa8.37□□□□□ -1.07
ARHGEF28-209ENST00000510131 BHLHE41Q9C0J9 482 aaPredicted RBP8.37□□□□□ -1.07
ARHGEF28-209ENST00000510131 LATS2Q9NRM7 1088 aa8.37□□□□□ -1.07
ARHGEF28-209ENST00000510131 AMOTL2Q9Y2J4 779 aa8.37□□□□□ -1.07
ARHGEF28-209ENST00000510131 OAS3Q9Y6K5 1087 aaKnown RBP8.37□□□□□ -1.07
ARHGEF28-209ENST00000510131 CARNS1A5YM72 827 aa8.36□□□□□ -1.07
ARHGEF28-209ENST00000510131 WDR64B1ANS9 1081 aa8.36□□□□□ -1.07
ARHGEF28-209ENST00000510131 MAP4P27816 1152 aaKnown RBP8.36□□□□□ -1.07
ARHGEF28-209ENST00000510131 IRAK1P51617 712 aa8.36□□□□□ -1.07
ARHGEF28-209ENST00000510131 SGO2Q562F6 1265 aa8.36□□□□□ -1.07
ARHGEF28-209ENST00000510131 PEAR1Q5VY43 1037 aaPredicted RBP8.36□□□□□ -1.07
ARHGEF28-209ENST00000510131 KRTAP1-3Q8IUG1 177 aa8.36□□□□□ -1.07
ARHGEF28-209ENST00000510131 TMPRSS13Q9BYE2 586 aa8.36□□□□□ -1.07
ARHGEF28-209ENST00000510131 SOX17Q9H6I2 414 aaPredicted RBP8.36□□□□□ -1.07
ARHGEF28-209ENST00000510131 ZFYVE28Q9HCC9 887 aa8.36□□□□□ -1.07
ARHGEF28-209ENST00000510131 ANO2Q9NQ90 1003 aa8.36□□□□□ -1.07
ARHGEF28-209ENST00000510131 CCDC87Q9NVE4 849 aa8.36□□□□□ -1.07
ARHGEF28-209ENST00000510131 GTF3C3Q9Y5Q9 886 aa8.36□□□□□ -1.07
ARHGEF28-209ENST00000510131 LOC100289279A0A1B0GTE1 492 aa8.35□□□□□ -1.07
ARHGEF28-209ENST00000510131 ADAMTS4O75173 837 aa8.35□□□□□ -1.07
ARHGEF28-209ENST00000510131 ABL1P00519 1130 aa8.35□□□□□ -1.07
ARHGEF28-209ENST00000510131 ESRRAP11474 423 aaPredicted RBP8.35□□□□□ -1.07
ARHGEF28-209ENST00000510131 RXRBP28702 533 aa8.35□□□□□ -1.07
ARHGEF28-209ENST00000510131 DTX1Q86Y01 620 aa8.35□□□□□ -1.07
ARHGEF28-209ENST00000510131 GJD3Q8N144 294 aa8.35□□□□□ -1.07
ARHGEF28-209ENST00000510131 SMG8Q8ND04 991 aaKnown RBP8.35□□□□□ -1.07
ARHGEF28-209ENST00000510131 MFSD14AQ96MC6 490 aa8.35□□□□□ -1.07
ARHGEF28-209ENST00000510131 CYP4F12Q9HCS2 524 aa8.35□□□□□ -1.07
ARHGEF28-209ENST00000510131 DLGAP3O95886 979 aa8.34□□□□□ -1.07
ARHGEF28-209ENST00000510131 ZNF211Q13398 564 aaPredicted RBP8.34□□□□□ -1.07
ARHGEF28-209ENST00000510131 SUGCTQ9HAC7 445 aa8.34□□□□□ -1.07
ARHGEF28-209ENST00000510131 METTL12A8MUP2 240 aa8.33□□□□□ -1.08
ARHGEF28-209ENST00000510131 PAX4O43316 350 aa8.33□□□□□ -1.08
ARHGEF28-209ENST00000510131 TIAF1O95411 115 aa8.33□□□□□ -1.08
ARHGEF28-209ENST00000510131 POLR3DP05423 398 aaPredicted RBP8.33□□□□□ -1.08
ARHGEF28-209ENST00000510131 GSTM4Q03013 218 aa8.33□□□□□ -1.08
ARHGEF28-209ENST00000510131 EXOSC6Q5RKV6 272 aaKnown RBP8.33□□□□□ -1.08
ARHGEF28-209ENST00000510131 LCE3BQ5TA77 95 aa8.32□□□□□ -1.08
ARHGEF28-209ENST00000510131 C1orf115Q9H7X2 142 aa8.32□□□□□ -1.08
ARHGEF28-209ENST00000510131 WNT11O96014 354 aa8.31□□□□□ -1.08
ARHGEF28-209ENST00000510131 DRD2P14416 443 aa8.31□□□□□ -1.08
ARHGEF28-209ENST00000510131 TAL1P17542 331 aaPredicted RBP8.31□□□□□ -1.08
ARHGEF28-209ENST00000510131 HOXA10P31260 410 aaPredicted RBP8.31□□□□□ -1.08
ARHGEF28-209ENST00000510131 FBXL6Q8N531 539 aa8.31□□□□□ -1.08
ARHGEF28-209ENST00000510131 GIMAP7Q8NHV1 300 aa8.31□□□□□ -1.08
ARHGEF28-209ENST00000510131 ATG3Q9NT62 314 aa8.31□□□□□ -1.08
ARHGEF28-209ENST00000510131 PIM2Q9P1W9 311 aa8.31□□□□□ -1.08
ARHGEF28-209ENST00000510131 FAM95CA0A1B0GW59 222 aa8.3□□□□□ -1.08
ARHGEF28-209ENST00000510131 F13BP05160 661 aa8.3□□□□□ -1.08
ARHGEF28-209ENST00000510131 USP11P51784 963 aa8.3□□□□□ -1.08
ARHGEF28-209ENST00000510131 NFKBIBQ15653 356 aa8.3□□□□□ -1.08
ARHGEF28-209ENST00000510131 A0A096LPE4 126 aa8.29□□□□□ -1.08
ARHGEF28-209ENST00000510131 A0A1W2PP55 124 aa8.29□□□□□ -1.08
ARHGEF28-209ENST00000510131 A0A1W2PPZ6 126 aa8.29□□□□□ -1.08
ARHGEF28-209ENST00000510131 EIF4EBP3O60516 100 aaPredicted RBP8.29□□□□□ -1.08
ARHGEF28-209ENST00000510131 CDPF1Q6NVV7 123 aa8.29□□□□□ -1.08
ARHGEF28-209ENST00000510131 PAOXQ6QHF9 649 aa8.29□□□□□ -1.08
ARHGEF28-209ENST00000510131 FBLIM1Q8WUP2 373 aa8.29□□□□□ -1.08
ARHGEF28-209ENST00000510131 GOLGA2P5Q9HBQ8 144 aa8.29□□□□□ -1.08
ARHGEF28-209ENST00000510131 LEMD3Q9Y2U8 911 aa8.29□□□□□ -1.08
ARHGEF28-209ENST00000510131 SOX4Q06945 474 aaPredicted RBP8.28□□□□□ -1.08
ARHGEF28-209ENST00000510131 PCDH1Q08174 1060 aa8.28□□□□□ -1.08
ARHGEF28-209ENST00000510131 ZNF423Q2M1K9 1284 aa8.28□□□□□ -1.08
ARHGEF28-209ENST00000510131 SPRED3Q2MJR0 410 aa8.28□□□□□ -1.08
ARHGEF28-209ENST00000510131 KRTAP19-1Q8IUB9 90 aa8.28□□□□□ -1.08
ARHGEF28-209ENST00000510131 CCNJLQ8IV13 435 aa8.28□□□□□ -1.08
ARHGEF28-209ENST00000510131 GALNT12Q8IXK2 581 aa8.28□□□□□ -1.08
ARHGEF28-209ENST00000510131 C2CD4AQ8NCU7 369 aaPredicted RBP8.28□□□□□ -1.08
ARHGEF28-209ENST00000510131 OSBPL1AQ9BXW6 950 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms