RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 M0R2C6 588 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 MBD3O95983 291 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 ZFYP08048 801 aaPredicted RBP5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 CYP21A2P08686 494 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 FGFR2P21802 821 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 ARID4AP29374 1257 aaPredicted RBP5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 TOB2Q14106 344 aaPredicted RBP5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 SCARF1Q14162 830 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 PUM3Q15397 648 aaKnown RBP5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 ME3Q16798 604 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 FAM98CQ17RN3 349 aaKnown RBP5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 LRRFIP1Q32MZ4 808 aaKnown RBP5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 CCDC158Q5M9N0 1113 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 SUSD4Q5VX71 490 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 CCDC83Q8IWF9 413 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 LINC00116Q8NCU8 138 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 MS4A4AQ96JQ5 239 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 ARXQ96QS3 562 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 UTP14AQ9BVJ6 771 aaKnown RBP5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 TPCN1Q9ULQ1 816 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 SMC3Q9UQE7 1217 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 CCDC9Q9Y3X0 531 aaKnown RBP5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 NUP98P52948 1817 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 MROH5Q6ZUA9 1318 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 MYH3P11055 1940 aa5.68□□□□□ -1.5
PDLIM5-214ENST00000510099 A0A0G2JS52 829 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 FOXP2O15409 715 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 KCNQ2O43526 872 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 STX6O43752 255 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 PDE8BO95263 885 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 F13A1P00488 732 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 HMGB1P09429 215 aaKnown RBP5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 ZSCAN22P10073 491 aaPredicted RBP5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 HSPD1P10809 573 aaKnown RBP5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 HSP90B1P14625 803 aaKnown RBP5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 SYT1P21579 422 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 GJB2P29033 226 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 MCAMP43121 646 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 ZAP70P43403 619 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 MRE11P49959 708 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 ZNF445P59923 1031 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 GORABQ5T7V8 394 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 PI16Q6UXB8 463 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 LDHAL6AQ6ZMR3 332 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 STOX1Q6ZVD7 989 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 GPT2Q8TD30 523 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 APPBP2Q92624 585 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 GTF3C6Q969F1 213 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 OSBP2Q969R2 916 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 CHAMP1Q96JM3 812 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 C8orf37Q96NL8 207 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 NEK1Q96PY6 1258 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 CNNM1Q9NRU3 951 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 BRPF3Q9ULD4 1205 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 MTMR6Q9Y217 621 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 ZNF652Q9Y2D9 606 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 DDX49Q9Y6V7 483 aaKnown RBP5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 COL24A1Q17RW2 1714 aa5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 DDX60Q8IY21 1712 aaKnown RBP5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 MYH14Q7Z406 1995 aaKnown RBP5.67□□□□□ -1.5
PDLIM5-214ENST00000510099 PRPF40AO75400 957 aaKnown RBP5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 NUDT7P0C024 238 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 UQCRFS1P1P0C7P4 283 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 XRCC6P12956 609 aaKnown RBP eCLIP5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 PDIA4P13667 645 aaKnown RBP5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 SLC5A1P13866 664 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 HCLS1P14317 486 aaPredicted RBP5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 ADD2P35612 726 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 PHKA1P46020 1223 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 FKBP4Q02790 459 aaKnown RBP eCLIP5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 TTF1Q15361 905 aaPredicted RBP5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 SLFNL1Q499Z3 407 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 CCDC152Q4G0S7 254 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 FOXD4L5Q5VV16 416 aaPredicted RBP5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 CLEC4GQ6UXB4 293 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 GAS2L3Q86XJ1 694 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 FOXD4L4Q8WXT5 416 aaPredicted RBP5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 LPIN2Q92539 896 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 NGLY1Q96IV0 654 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 TCEANC2Q96MN5 208 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 LARP6Q9BRS8 491 aaKnown RBP5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 AGXT2Q9BYV1 514 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 GRPEL1Q9HAV7 217 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 NIP7Q9Y221 180 aaKnown RBP eCLIP5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 ZMYM6O95789 1325 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 COL4A1P02462 1669 aa5.66□□□□□ -1.5
PDLIM5-214ENST00000510099 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.65□□□□□ -1.5
PDLIM5-214ENST00000510099 E7EWF7 191 aa5.65□□□□□ -1.5
PDLIM5-214ENST00000510099 PFKFB2O60825 505 aa5.65□□□□□ -1.5
PDLIM5-214ENST00000510099 PDCP20941 246 aa5.65□□□□□ -1.5
PDLIM5-214ENST00000510099 EXOSC10Q01780 885 aaKnown RBP5.65□□□□□ -1.5
PDLIM5-214ENST00000510099 RASGRF1Q13972 1273 aa5.65□□□□□ -1.5
PDLIM5-214ENST00000510099 UBE3CQ15386 1083 aa5.65□□□□□ -1.5
PDLIM5-214ENST00000510099 ZSCAN23Q3MJ62 389 aa5.65□□□□□ -1.5
PDLIM5-214ENST00000510099 RC3H1Q5TC82 1133 aaKnown RBP5.65□□□□□ -1.5
PDLIM5-214ENST00000510099 CCDC102BQ68D86 513 aa5.65□□□□□ -1.5
PDLIM5-214ENST00000510099 ZSCAN25Q6NSZ9 544 aa5.65□□□□□ -1.5
PDLIM5-214ENST00000510099 CAVIN1Q6NZI2 390 aaKnown RBP5.65□□□□□ -1.5
PDLIM5-214ENST00000510099 DHX32Q7L7V1 743 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms