RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 GRIA4P48058 902 aa6.51□□□□□ -1.37
HMGB1P29-201ENST00000505659 PIP4K2BP78356 416 aa6.51□□□□□ -1.37
HMGB1P29-201ENST00000505659 KCNA1Q09470 495 aa6.51□□□□□ -1.37
HMGB1P29-201ENST00000505659 KIAA1211Q6ZU35 1233 aa6.51□□□□□ -1.37
HMGB1P29-201ENST00000505659 CITED4Q96RK1 184 aa6.51□□□□□ -1.37
HMGB1P29-201ENST00000505659 LIN7BQ9HAP6 207 aa6.51□□□□□ -1.37
HMGB1P29-201ENST00000505659 DCTN4Q9UJW0 460 aa6.51□□□□□ -1.37
HMGB1P29-201ENST00000505659 SOX1O00570 391 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P29-201ENST00000505659 GLB1P16278 677 aa6.5□□□□□ -1.37
HMGB1P29-201ENST00000505659 IKBKEQ14164 716 aa6.5□□□□□ -1.37
HMGB1P29-201ENST00000505659 CCNJLQ8IV13 435 aa6.5□□□□□ -1.37
HMGB1P29-201ENST00000505659 TMEM130Q8N3G9 435 aa6.5□□□□□ -1.37
HMGB1P29-201ENST00000505659 KLHL23Q8NBE8 558 aa6.5□□□□□ -1.37
HMGB1P29-201ENST00000505659 CCDC74AQ96AQ1 378 aa6.5□□□□□ -1.37
HMGB1P29-201ENST00000505659 ESRRAP11474 423 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P29-201ENST00000505659 DUOXA2Q1HG44 320 aa6.49□□□□□ -1.37
HMGB1P29-201ENST00000505659 PI16Q6UXB8 463 aa6.49□□□□□ -1.37
HMGB1P29-201ENST00000505659 Q6ZS46 218 aa6.49□□□□□ -1.37
HMGB1P29-201ENST00000505659 EPS8L3Q8TE67 593 aaKnown RBP6.49□□□□□ -1.37
HMGB1P29-201ENST00000505659 ALKBH8Q96BT7 664 aaKnown RBP6.49□□□□□ -1.37
HMGB1P29-201ENST00000505659 DMRTB1Q96MA1 342 aa6.49□□□□□ -1.37
HMGB1P29-201ENST00000505659 CSRNP1Q96S65 589 aa6.49□□□□□ -1.37
HMGB1P29-201ENST00000505659 A0A096LPE4 126 aa6.48□□□□□ -1.37
HMGB1P29-201ENST00000505659 A0A1W2PPZ6 126 aa6.48□□□□□ -1.37
HMGB1P29-201ENST00000505659 NEFLP07196 543 aa6.48□□□□□ -1.37
HMGB1P29-201ENST00000505659 C19orf57Q0VDD7 668 aa6.48□□□□□ -1.37
HMGB1P29-201ENST00000505659 KIAA0319Q5VV43 1072 aa6.48□□□□□ -1.37
HMGB1P29-201ENST00000505659 DZIP1LQ8IYY4 767 aaKnown RBP6.48□□□□□ -1.37
HMGB1P29-201ENST00000505659 WNT8BQ93098 351 aa6.48□□□□□ -1.37
HMGB1P29-201ENST00000505659 UBL7Q96S82 380 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P29-201ENST00000505659 EHD4Q9H223 541 aa6.48□□□□□ -1.37
HMGB1P29-201ENST00000505659 OSGEPQ9NPF4 335 aa6.48□□□□□ -1.37
HMGB1P29-201ENST00000505659 DSC3Q14574 896 aa6.47□□□□□ -1.37
HMGB1P29-201ENST00000505659 ZNF423Q2M1K9 1284 aa6.47□□□□□ -1.37
HMGB1P29-201ENST00000505659 DCAF11Q8TEB1 546 aa6.47□□□□□ -1.37
HMGB1P29-201ENST00000505659 SETDB2Q96T68 719 aa6.47□□□□□ -1.37
HMGB1P29-201ENST00000505659 USP26Q9BXU7 913 aa6.47□□□□□ -1.37
HMGB1P29-201ENST00000505659 DNAJC25Q9H1X3 360 aa6.47□□□□□ -1.37
HMGB1P29-201ENST00000505659 ABCB6Q9NP58 842 aa6.47□□□□□ -1.37
HMGB1P29-201ENST00000505659 PNMA6FA0A0J9YX94 578 aa6.46□□□□□ -1.38
HMGB1P29-201ENST00000505659 TREHO43280 583 aa6.46□□□□□ -1.38
HMGB1P29-201ENST00000505659 GADD45BO75293 160 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P29-201ENST00000505659 DLGAP3O95886 979 aa6.46□□□□□ -1.38
HMGB1P29-201ENST00000505659 H2AFB1P0C5Y9 115 aa6.46□□□□□ -1.38
HMGB1P29-201ENST00000505659 H2AFB2P0C5Z0 115 aa6.46□□□□□ -1.38
HMGB1P29-201ENST00000505659 PCDH1Q08174 1060 aa6.46□□□□□ -1.38
HMGB1P29-201ENST00000505659 PRSS36Q5K4E3 855 aa6.46□□□□□ -1.38
HMGB1P29-201ENST00000505659 AEBP1Q8IUX7 1158 aa6.46□□□□□ -1.38
HMGB1P29-201ENST00000505659 GLIS3Q8NEA6 775 aa6.46□□□□□ -1.38
HMGB1P29-201ENST00000505659 LOC100996750A0A140TA64 210 aa6.45□□□□□ -1.38
HMGB1P29-201ENST00000505659 LOC100289279A0A1B0GTE1 492 aa6.45□□□□□ -1.38
HMGB1P29-201ENST00000505659 ARL4DP49703 201 aa6.45□□□□□ -1.38
HMGB1P29-201ENST00000505659 GSTM4Q03013 218 aa6.45□□□□□ -1.38
HMGB1P29-201ENST00000505659 GRM2Q14416 872 aa6.45□□□□□ -1.38
HMGB1P29-201ENST00000505659 ARMC10Q8N2F6 343 aa6.45□□□□□ -1.38
HMGB1P29-201ENST00000505659 RUSC1Q9BVN2 902 aa6.45□□□□□ -1.38
HMGB1P29-201ENST00000505659 KRTAP4-6Q9BYQ5 205 aa6.45□□□□□ -1.38
HMGB1P29-201ENST00000505659 CLEC4MQ9H2X3 399 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P29-201ENST00000505659 ZNF576Q9H609 170 aa6.45□□□□□ -1.38
HMGB1P29-201ENST00000505659 CTSBP07858 339 aa6.44□□□□□ -1.38
HMGB1P29-201ENST00000505659 PREPP48147 710 aa6.44□□□□□ -1.38
HMGB1P29-201ENST00000505659 PRR23CQ6ZRP0 262 aa6.44□□□□□ -1.38
HMGB1P29-201ENST00000505659 NRSN2Q9GZP1 204 aa6.44□□□□□ -1.38
HMGB1P29-201ENST00000505659 ECEL1O95672 775 aa6.43□□□□□ -1.38
HMGB1P29-201ENST00000505659 PDIA4P13667 645 aaKnown RBP6.43□□□□□ -1.38
HMGB1P29-201ENST00000505659 ITPKAP23677 461 aa6.43□□□□□ -1.38
HMGB1P29-201ENST00000505659 MAPK8P45983 427 aa6.43□□□□□ -1.38
HMGB1P29-201ENST00000505659 PLCB3Q01970 1234 aa6.43□□□□□ -1.38
HMGB1P29-201ENST00000505659 ENOX2Q16206 610 aaKnown RBP6.43□□□□□ -1.38
HMGB1P29-201ENST00000505659 PRPF40BQ6NWY9 871 aaKnown RBP6.43□□□□□ -1.38
HMGB1P29-201ENST00000505659 SOX17Q9H6I2 414 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P29-201ENST00000505659 WWC3Q9ULE0 1092 aa6.43□□□□□ -1.38
HMGB1P29-201ENST00000505659 TMEM238LA0A1B0GVL6 79 aa6.42□□□□□ -1.38
HMGB1P29-201ENST00000505659 ZNF157P51786 506 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P29-201ENST00000505659 FMR1Q06787 632 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB1P29-201ENST00000505659 FAAP100Q0VG06 881 aa6.42□□□□□ -1.38
HMGB1P29-201ENST00000505659 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB1P29-201ENST00000505659 UTP4Q969X6 686 aaKnown RBP6.42□□□□□ -1.38
HMGB1P29-201ENST00000505659 FAM46AQ96IP4 442 aaKnown RBP6.42□□□□□ -1.38
HMGB1P29-201ENST00000505659 ASB16Q96NS5 453 aa6.42□□□□□ -1.38
HMGB1P29-201ENST00000505659 TRIM56Q9BRZ2 755 aaKnown RBP6.42□□□□□ -1.38
HMGB1P29-201ENST00000505659 CEP41Q9BYV8 373 aa6.42□□□□□ -1.38
HMGB1P29-201ENST00000505659 RNF208Q9H0X6 261 aa6.42□□□□□ -1.38
HMGB1P29-201ENST00000505659 B3GALT4O96024 378 aa6.41□□□□□ -1.38
HMGB1P29-201ENST00000505659 FCGRTP55899 365 aa6.41□□□□□ -1.38
HMGB1P29-201ENST00000505659 BCO2Q9BYV7 579 aa6.41□□□□□ -1.38
HMGB1P29-201ENST00000505659 P4HBP07237 508 aaKnown RBP6.4□□□□□ -1.38
HMGB1P29-201ENST00000505659 MAOBP27338 520 aa6.4□□□□□ -1.38
HMGB1P29-201ENST00000505659 ZMYM1Q5SVZ6 1142 aa6.4□□□□□ -1.38
HMGB1P29-201ENST00000505659 FDX2Q6P4F2 183 aa6.4□□□□□ -1.38
HMGB1P29-201ENST00000505659 NXPE4Q6UWF7 544 aa6.4□□□□□ -1.38
HMGB1P29-201ENST00000505659 ZSCAN29Q8IWY8 852 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P29-201ENST00000505659 TMPRSS13Q9BYE2 586 aa6.4□□□□□ -1.38
HMGB1P29-201ENST00000505659 NLRP2Q9NX02 1062 aa6.4□□□□□ -1.38
HMGB1P29-201ENST00000505659 SART1O43290 800 aaKnown RBP6.39□□□□□ -1.39
HMGB1P29-201ENST00000505659 DRD2P14416 443 aa6.39□□□□□ -1.39
HMGB1P29-201ENST00000505659 FSTP19883 344 aa6.39□□□□□ -1.39
HMGB1P29-201ENST00000505659 ANKRD34AQ69YU3 496 aa6.39□□□□□ -1.39
HMGB1P29-201ENST00000505659 SND1Q7KZF4 910 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB1P29-201ENST00000505659 MYRFLQ96LU7 910 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 197.3 ms