RNA–Protein interactions for RNA: ENST00000505614.1

NDFIP1-203, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 3

Gene NDFIP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-203ENST00000505614 SOX13Q9UN79 622 aa8.24□□□□□ -1.09
NDFIP1-203ENST00000505614 NID1P14543 1247 aa8.23□□□□□ -1.09
NDFIP1-203ENST00000505614 HOXB4P17483 251 aaPredicted RBP8.23□□□□□ -1.09
NDFIP1-203ENST00000505614 RAC1P63000 192 aa8.23□□□□□ -1.09
NDFIP1-203ENST00000505614 TRAPPC3LQ5T215 181 aa8.23□□□□□ -1.09
NDFIP1-203ENST00000505614 C8orf86Q6ZUL3 223 aa8.23□□□□□ -1.09
NDFIP1-203ENST00000505614 DDX54Q8TDD1 881 aaKnown RBP8.23□□□□□ -1.09
NDFIP1-203ENST00000505614 ANKRD24Q8TF21 1146 aa8.23□□□□□ -1.09
NDFIP1-203ENST00000505614 CRELD1Q96HD1 420 aa8.23□□□□□ -1.09
NDFIP1-203ENST00000505614 CLEC4MQ9H2X3 399 aaPredicted RBP8.23□□□□□ -1.09
NDFIP1-203ENST00000505614 H3BRJ5 948 aa8.22□□□□□ -1.09
NDFIP1-203ENST00000505614 USP17L7P0C7H9 530 aa8.22□□□□□ -1.09
NDFIP1-203ENST00000505614 ARL4DP49703 201 aa8.22□□□□□ -1.09
NDFIP1-203ENST00000505614 RBM25P49756 843 aaKnown RBP8.22□□□□□ -1.09
NDFIP1-203ENST00000505614 MRPL58Q14197 206 aaKnown RBP8.22□□□□□ -1.09
NDFIP1-203ENST00000505614 SPRED3Q2MJR0 410 aa8.22□□□□□ -1.09
NDFIP1-203ENST00000505614 LINC00114Q6XXX2 140 aa8.22□□□□□ -1.09
NDFIP1-203ENST00000505614 CEP44Q9C0F1 390 aa8.22□□□□□ -1.09
NDFIP1-203ENST00000505614 PIP4K2BP78356 416 aa8.21□□□□□ -1.1
NDFIP1-203ENST00000505614 COL9A3Q14050 684 aaPredicted RBP8.21□□□□□ -1.1
NDFIP1-203ENST00000505614 IKBKEQ14164 716 aa8.21□□□□□ -1.1
NDFIP1-203ENST00000505614 MRRFQ96E11 262 aaKnown RBP8.21□□□□□ -1.1
NDFIP1-203ENST00000505614 FAM161BQ96MY7 647 aa8.21□□□□□ -1.1
NDFIP1-203ENST00000505614 OSGEPQ9NPF4 335 aa8.21□□□□□ -1.1
NDFIP1-203ENST00000505614 SH2B1Q9NRF2 756 aaPredicted RBP8.21□□□□□ -1.1
NDFIP1-203ENST00000505614 AKAP2Q9Y2D5 859 aa8.21□□□□□ -1.1
NDFIP1-203ENST00000505614 METTL12A8MUP2 240 aa8.2□□□□□ -1.1
NDFIP1-203ENST00000505614 E9PSI1 815 aa8.2□□□□□ -1.1
NDFIP1-203ENST00000505614 BAG6P46379 1132 aa8.2□□□□□ -1.1
NDFIP1-203ENST00000505614 SNRPNP63162 240 aaKnown RBP8.2□□□□□ -1.1
NDFIP1-203ENST00000505614 PCDH1Q08174 1060 aa8.2□□□□□ -1.1
NDFIP1-203ENST00000505614 TRIM28Q13263 835 aaKnown RBP8.2□□□□□ -1.1
NDFIP1-203ENST00000505614 VN1R5Q7Z5H4 357 aa8.2□□□□□ -1.1
NDFIP1-203ENST00000505614 DMRTC2Q8IXT2 367 aaPredicted RBP8.2□□□□□ -1.1
NDFIP1-203ENST00000505614 TMEM151AQ8N4L1 468 aa8.2□□□□□ -1.1
NDFIP1-203ENST00000505614 C3orf58Q8NDZ4 430 aa8.2□□□□□ -1.1
NDFIP1-203ENST00000505614 ZNF576Q9H609 170 aa8.2□□□□□ -1.1
NDFIP1-203ENST00000505614 SOX17Q9H6I2 414 aaPredicted RBP8.2□□□□□ -1.1
NDFIP1-203ENST00000505614 RNF19AQ9NV58 838 aa8.2□□□□□ -1.1
NDFIP1-203ENST00000505614 GDF11O95390 407 aa8.19□□□□□ -1.1
NDFIP1-203ENST00000505614 EPHA1P21709 976 aa8.19□□□□□ -1.1
NDFIP1-203ENST00000505614 GSK3AP49840 483 aa8.19□□□□□ -1.1
NDFIP1-203ENST00000505614 RASSF7Q02833 373 aa8.19□□□□□ -1.1
NDFIP1-203ENST00000505614 PPP2R3AQ06190 1150 aa8.19□□□□□ -1.1
NDFIP1-203ENST00000505614 TAF1CQ15572 869 aaPredicted RBP8.19□□□□□ -1.1
NDFIP1-203ENST00000505614 PRRT3Q5FWE3 981 aa8.19□□□□□ -1.1
NDFIP1-203ENST00000505614 ILDR2Q71H61 639 aa8.19□□□□□ -1.1
NDFIP1-203ENST00000505614 KLHL23Q8NBE8 558 aa8.19□□□□□ -1.1
NDFIP1-203ENST00000505614 PLVAPQ9BX97 442 aa8.19□□□□□ -1.1
NDFIP1-203ENST00000505614 FSCN2O14926 492 aa8.18□□□□□ -1.1
NDFIP1-203ENST00000505614 ESRRAP11474 423 aaPredicted RBP8.18□□□□□ -1.1
NDFIP1-203ENST00000505614 ST13P50502 369 aaKnown RBP8.18□□□□□ -1.1
NDFIP1-203ENST00000505614 ALYREFQ86V81 257 aaKnown RBP8.18□□□□□ -1.1
NDFIP1-203ENST00000505614 SEC31BQ9NQW1 1179 aa8.18□□□□□ -1.1
NDFIP1-203ENST00000505614 LINC01387J3KSC0 135 aa8.17□□□□□ -1.1
NDFIP1-203ENST00000505614 B3GALT4O96024 378 aa8.17□□□□□ -1.1
NDFIP1-203ENST00000505614 C19orf57Q0VDD7 668 aa8.17□□□□□ -1.1
NDFIP1-203ENST00000505614 SV2BQ7L1I2 683 aa8.17□□□□□ -1.1
NDFIP1-203ENST00000505614 FBXO11Q86XK2 927 aa8.17□□□□□ -1.1
NDFIP1-203ENST00000505614 TRIM11Q96F44 468 aa8.17□□□□□ -1.1
NDFIP1-203ENST00000505614 TMEM39AQ9NV64 488 aa8.17□□□□□ -1.1
NDFIP1-203ENST00000505614 TTF2Q9UNY4 1162 aaKnown RBP8.17□□□□□ -1.1
NDFIP1-203ENST00000505614 SAMM50Q9Y512 469 aa8.17□□□□□ -1.1
NDFIP1-203ENST00000505614 USP31Q70CQ4 1352 aa8.17□□□□□ -1.1
NDFIP1-203ENST00000505614 A0A0A0MRY4 1105 aa8.16□□□□□ -1.1
NDFIP1-203ENST00000505614 UNCXA6NJT0 531 aa8.16□□□□□ -1.1
NDFIP1-203ENST00000505614 SOX1O00570 391 aaPredicted RBP8.16□□□□□ -1.1
NDFIP1-203ENST00000505614 CTSHP09668 335 aa8.16□□□□□ -1.1
NDFIP1-203ENST00000505614 ADAMTSL4Q6UY14 1074 aa8.16□□□□□ -1.1
NDFIP1-203ENST00000505614 CNTNAP5Q8WYK1 1306 aa8.16□□□□□ -1.1
NDFIP1-203ENST00000505614 RLBP1P12271 317 aa8.15□□□□□ -1.1
NDFIP1-203ENST00000505614 CDC25BP30305 580 aa8.15□□□□□ -1.1
NDFIP1-203ENST00000505614 AP3B2Q13367 1082 aa8.15□□□□□ -1.1
NDFIP1-203ENST00000505614 SUZ12Q15022 739 aaKnown RBP8.15□□□□□ -1.1
NDFIP1-203ENST00000505614 SETDB1Q15047 1291 aa8.15□□□□□ -1.1
NDFIP1-203ENST00000505614 ZNF423Q2M1K9 1284 aa8.15□□□□□ -1.1
NDFIP1-203ENST00000505614 TSNAXIP1Q2TAA8 658 aa8.15□□□□□ -1.1
NDFIP1-203ENST00000505614 FMR1NBQ8N0W7 255 aaPredicted RBP8.15□□□□□ -1.1
NDFIP1-203ENST00000505614 TMEM87AQ8NBN3 555 aa8.15□□□□□ -1.1
NDFIP1-203ENST00000505614 NOC4LQ9BVI4 516 aaKnown RBP8.15□□□□□ -1.1
NDFIP1-203ENST00000505614 BACH2Q9BYV9 841 aa8.15□□□□□ -1.1
NDFIP1-203ENST00000505614 KIAA1522Q9P206 1035 aaPredicted RBP8.15□□□□□ -1.1
NDFIP1-203ENST00000505614 GPN3Q9UHW5 284 aaPredicted RBP8.15□□□□□ -1.1
NDFIP1-203ENST00000505614 SCAMP3O14828 347 aaKnown RBP8.14□□□□□ -1.11
NDFIP1-203ENST00000505614 CYP11A1P05108 521 aa8.14□□□□□ -1.11
NDFIP1-203ENST00000505614 SPATA31C1P0DKV0 1188 aa8.14□□□□□ -1.11
NDFIP1-203ENST00000505614 ELNP15502 786 aa8.14□□□□□ -1.11
NDFIP1-203ENST00000505614 HNRNPUQ00839 825 aaKnown RBP eCLIP8.14□□□□□ -1.11
NDFIP1-203ENST00000505614 SLC7A3Q8WY07 619 aa8.14□□□□□ -1.11
NDFIP1-203ENST00000505614 ZNF428Q96B54 188 aa8.14□□□□□ -1.11
NDFIP1-203ENST00000505614 METTL5Q9NRN9 209 aaKnown RBP8.14□□□□□ -1.11
NDFIP1-203ENST00000505614 CD68P34810 354 aaPredicted RBP8.13□□□□□ -1.11
NDFIP1-203ENST00000505614 HP1BP3Q5SSJ5 553 aaPredicted RBP8.13□□□□□ -1.11
NDFIP1-203ENST00000505614 TPTE2Q6XPS3 522 aa8.13□□□□□ -1.11
NDFIP1-203ENST00000505614 NECAB3Q96P71 396 aaPredicted RBP8.13□□□□□ -1.11
NDFIP1-203ENST00000505614 NACC1Q96RE7 527 aa8.13□□□□□ -1.11
NDFIP1-203ENST00000505614 EMILIN2Q9BXX0 1053 aa8.13□□□□□ -1.11
NDFIP1-203ENST00000505614 DEAF1O75398 565 aaPredicted RBP8.12□□□□□ -1.11
NDFIP1-203ENST00000505614 GSTM4Q03013 218 aa8.12□□□□□ -1.11
NDFIP1-203ENST00000505614 CCDC85BQ15834 202 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms