RNA–Protein interactions for RNA: ENST00000505614.1

NDFIP1-203, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 3

Gene NDFIP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-203ENST00000505614 AEBP2Q6ZN18 517 aaPredicted RBP24.61■■□□□ 1.53
NDFIP1-203ENST00000505614 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
NDFIP1-203ENST00000505614 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
NDFIP1-203ENST00000505614 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
NDFIP1-203ENST00000505614 FOXD1Q16676 465 aa19.54■□□□□ 0.72
NDFIP1-203ENST00000505614 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
NDFIP1-203ENST00000505614 PIAS4Q8N2W9 510 aaPredicted RBP18.35■□□□□ 0.53
NDFIP1-203ENST00000505614 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
NDFIP1-203ENST00000505614 ADRA2BP18089 450 aa18.34■□□□□ 0.53
NDFIP1-203ENST00000505614 MSH5O43196 834 aa18.28■□□□□ 0.52
NDFIP1-203ENST00000505614 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
NDFIP1-203ENST00000505614 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
NDFIP1-203ENST00000505614 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.3
NDFIP1-203ENST00000505614 KCNA4P22459 653 aa16.92■□□□□ 0.3
NDFIP1-203ENST00000505614 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
NDFIP1-203ENST00000505614 MAPK8IP2Q13387 824 aaPredicted RBP16.78■□□□□ 0.28
NDFIP1-203ENST00000505614 DMRT2Q9Y5R5 561 aa16.67■□□□□ 0.26
NDFIP1-203ENST00000505614 CNKSR2Q8WXI2 1034 aa16.64■□□□□ 0.25
NDFIP1-203ENST00000505614 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
NDFIP1-203ENST00000505614 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
NDFIP1-203ENST00000505614 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
NDFIP1-203ENST00000505614 HOXD11P31277 338 aaPredicted RBP16.11■□□□□ 0.17
NDFIP1-203ENST00000505614 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
NDFIP1-203ENST00000505614 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
NDFIP1-203ENST00000505614 EHMT2Q96KQ7 1210 aa15.96■□□□□ 0.15
NDFIP1-203ENST00000505614 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
NDFIP1-203ENST00000505614 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
NDFIP1-203ENST00000505614 FOXD4L1Q9NU39 408 aa15.6■□□□□ 0.09
NDFIP1-203ENST00000505614 RNF39Q9H2S5 420 aa15.58■□□□□ 0.08
NDFIP1-203ENST00000505614 ZBTB22O15209 634 aa15.52■□□□□ 0.08
NDFIP1-203ENST00000505614 SLC4A2P04920 1241 aa15.46■□□□□ 0.07
NDFIP1-203ENST00000505614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.06
NDFIP1-203ENST00000505614 C1QBPQ07021 282 aaKnown RBP15.37■□□□□ 0.05
NDFIP1-203ENST00000505614 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
NDFIP1-203ENST00000505614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.14■□□□□ 0.01
NDFIP1-203ENST00000505614 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
NDFIP1-203ENST00000505614 ATXN8OSP0DMR3 200 aa15.11■□□□□ 0.01
NDFIP1-203ENST00000505614 U3KPZ7 1027 aaPredicted RBP15.07■□□□□ 0
NDFIP1-203ENST00000505614 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
NDFIP1-203ENST00000505614 APLP2Q06481 763 aa14.96□□□□□ -0.01
NDFIP1-203ENST00000505614 CAPN15O75808 1086 aa14.81□□□□□ -0.04
NDFIP1-203ENST00000505614 SPINK5Q9NQ38 1064 aaPredicted RBP14.79□□□□□ -0.04
NDFIP1-203ENST00000505614 ATF5Q9Y2D1 282 aaPredicted RBP14.71□□□□□ -0.05
NDFIP1-203ENST00000505614 DSG3P32926 999 aa14.64□□□□□ -0.07
NDFIP1-203ENST00000505614 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
NDFIP1-203ENST00000505614 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
NDFIP1-203ENST00000505614 ABCB7O75027 752 aa14.47□□□□□ -0.09
NDFIP1-203ENST00000505614 POLA2Q14181 598 aa14.35□□□□□ -0.11
NDFIP1-203ENST00000505614 FBLN2P98095 1184 aa14.26□□□□□ -0.13
NDFIP1-203ENST00000505614 ZBTB12Q9Y330 459 aaPredicted RBP14.26□□□□□ -0.13
NDFIP1-203ENST00000505614 FKBP8Q14318 412 aa14.19□□□□□ -0.14
NDFIP1-203ENST00000505614 MKRN4PQ13434 485 aaPredicted RBP14.11□□□□□ -0.15
NDFIP1-203ENST00000505614 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
NDFIP1-203ENST00000505614 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
NDFIP1-203ENST00000505614 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
NDFIP1-203ENST00000505614 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
NDFIP1-203ENST00000505614 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
NDFIP1-203ENST00000505614 POTEHQ6S545 545 aa13.82□□□□□ -0.2
NDFIP1-203ENST00000505614 OSCARQ8IYS5 282 aa13.81□□□□□ -0.2
NDFIP1-203ENST00000505614 PROM2Q8N271 834 aa13.79□□□□□ -0.2
NDFIP1-203ENST00000505614 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
NDFIP1-203ENST00000505614 FBXO3Q9UK99 471 aa13.76□□□□□ -0.21
NDFIP1-203ENST00000505614 SSUH2Q9Y2M2 353 aa13.71□□□□□ -0.21
NDFIP1-203ENST00000505614 AKT1S1Q96B36 256 aa13.69□□□□□ -0.22
NDFIP1-203ENST00000505614 CHRDL2Q6WN34 429 aa13.63□□□□□ -0.23
NDFIP1-203ENST00000505614 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
NDFIP1-203ENST00000505614 REM2Q8IYK8 340 aaPredicted RBP13.55□□□□□ -0.24
NDFIP1-203ENST00000505614 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
NDFIP1-203ENST00000505614 VASPP50552 380 aaPredicted RBP13.46□□□□□ -0.25
NDFIP1-203ENST00000505614 AMER1Q5JTC6 1135 aaPredicted RBP13.43□□□□□ -0.26
NDFIP1-203ENST00000505614 PITPNM1O00562 1244 aa13.42□□□□□ -0.26
NDFIP1-203ENST00000505614 SPDYE1Q8NFV5 336 aaPredicted RBP13.38□□□□□ -0.27
NDFIP1-203ENST00000505614 PIP4P2Q8N4L2 257 aa13.33□□□□□ -0.28
NDFIP1-203ENST00000505614 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
NDFIP1-203ENST00000505614 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
NDFIP1-203ENST00000505614 MIER1Q8N108 512 aa13.27□□□□□ -0.29
NDFIP1-203ENST00000505614 RTN4Q9NQC3 1192 aaKnown RBP13.26□□□□□ -0.29
NDFIP1-203ENST00000505614 CLEC11AQ9Y240 323 aa13.26□□□□□ -0.29
NDFIP1-203ENST00000505614 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.29
NDFIP1-203ENST00000505614 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
NDFIP1-203ENST00000505614 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
NDFIP1-203ENST00000505614 ZBTB47Q9UFB7 747 aaPredicted RBP13.22□□□□□ -0.29
NDFIP1-203ENST00000505614 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
NDFIP1-203ENST00000505614 SPOCK2Q92563 424 aa13.14□□□□□ -0.31
NDFIP1-203ENST00000505614 PRKAR2AP13861 404 aaKnown RBP13.09□□□□□ -0.31
NDFIP1-203ENST00000505614 HAX1O00165 279 aa13.08□□□□□ -0.32
NDFIP1-203ENST00000505614 SP7Q8TDD2 431 aaPredicted RBP13.03□□□□□ -0.32
NDFIP1-203ENST00000505614 CREBZFQ9NS37 354 aa13.02□□□□□ -0.33
NDFIP1-203ENST00000505614 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
NDFIP1-203ENST00000505614 NPM1P06748 294 aaKnown RBP eCLIP12.94□□□□□ -0.34
NDFIP1-203ENST00000505614 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
NDFIP1-203ENST00000505614 PKD2Q13563 968 aa12.89□□□□□ -0.35
NDFIP1-203ENST00000505614 GSE1Q14687 1217 aa12.88□□□□□ -0.35
NDFIP1-203ENST00000505614 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
NDFIP1-203ENST00000505614 CIZ1Q9ULV3 898 aaPredicted RBP12.87□□□□□ -0.35
NDFIP1-203ENST00000505614 NUBP1P53384 320 aa12.86□□□□□ -0.35
NDFIP1-203ENST00000505614 EVX2Q03828 476 aa12.86□□□□□ -0.35
NDFIP1-203ENST00000505614 C19orf67A6NJJ6 358 aa12.82□□□□□ -0.36
NDFIP1-203ENST00000505614 ECM2O94769 699 aaPredicted RBP12.82□□□□□ -0.36
NDFIP1-203ENST00000505614 FAM212AQ96EL1 285 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms