RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 INTS3Q68E01 1043 aaKnown RBP31.72■■■□□ 2.67
PVT1-201ENST00000504719 C2orf69Q8N8R5 385 aa31.72■■■□□ 2.67
PVT1-201ENST00000504719 ZBED3Q96IU2 234 aaPredicted RBP31.72■■■□□ 2.67
PVT1-201ENST00000504719 HUNKP57058 714 aa31.71■■■□□ 2.67
PVT1-201ENST00000504719 PTPN12Q05209 780 aaKnown RBP31.71■■■□□ 2.67
PVT1-201ENST00000504719 IFFO2Q5TF58 517 aa31.71■■■□□ 2.67
PVT1-201ENST00000504719 AIDAQ96BJ3 306 aa31.71■■■□□ 2.67
PVT1-201ENST00000504719 HDAC5Q9UQL6 1122 aa31.71■■■□□ 2.67
PVT1-201ENST00000504719 FAM205AQ6ZU69 1335 aa31.71■■■□□ 2.67
PVT1-201ENST00000504719 IPO8O15397 1037 aaKnown RBP31.7■■■□□ 2.67
PVT1-201ENST00000504719 SCAF8Q9UPN6 1271 aaKnown RBP31.7■■■□□ 2.67
PVT1-201ENST00000504719 JAG2Q9Y219 1238 aa31.7■■■□□ 2.67
PVT1-201ENST00000504719 EYA2O00167 538 aa31.69■■■□□ 2.66
PVT1-201ENST00000504719 AOC2O75106 756 aa31.69■■■□□ 2.66
PVT1-201ENST00000504719 MAP2K2P36507 400 aa31.69■■■□□ 2.66
PVT1-201ENST00000504719 FBXO33Q7Z6M2 555 aa31.69■■■□□ 2.66
PVT1-201ENST00000504719 MEIS3Q99687 375 aa31.69■■■□□ 2.66
PVT1-201ENST00000504719 LRRFIP2Q9Y608 721 aaKnown RBP31.69■■■□□ 2.66
PVT1-201ENST00000504719 TRIM27P14373 513 aa31.68■■■□□ 2.66
PVT1-201ENST00000504719 ECM29Q5VYK3 1845 aa31.68■■■□□ 2.66
PVT1-201ENST00000504719 ATF7IPQ6VMQ6 1270 aa31.67■■■□□ 2.66
PVT1-201ENST00000504719 MTMR14Q8NCE2 650 aa31.67■■■□□ 2.66
PVT1-201ENST00000504719 F8W031 263 aaPredicted RBP31.66■■■□□ 2.66
PVT1-201ENST00000504719 FRAT1Q92837 279 aaPredicted RBP31.66■■■□□ 2.66
PVT1-201ENST00000504719 TNNQ9UQP3 1299 aa31.66■■■□□ 2.66
PVT1-201ENST00000504719 ARAP2Q8WZ64 1704 aa31.66■■■□□ 2.66
PVT1-201ENST00000504719 FGFR2P21802 821 aa31.65■■■□□ 2.66
PVT1-201ENST00000504719 CTCFP49711 727 aaPredicted RBP31.65■■■□□ 2.66
PVT1-201ENST00000504719 DLGAP5Q15398 846 aa31.65■■■□□ 2.66
PVT1-201ENST00000504719 RGMBQ6NW40 437 aa31.65■■■□□ 2.66
PVT1-201ENST00000504719 ATG9AQ7Z3C6 839 aa31.65■■■□□ 2.66
PVT1-201ENST00000504719 VPS37DQ86XT2 251 aa31.65■■■□□ 2.66
PVT1-201ENST00000504719 FBXO3Q9UK99 471 aa31.65■■■□□ 2.66
PVT1-201ENST00000504719 GNAI3P08754 354 aa31.64■■■□□ 2.66
PVT1-201ENST00000504719 PUM3Q15397 648 aaKnown RBP31.64■■■□□ 2.66
PVT1-201ENST00000504719 CAVIN4Q5BKX8 364 aa31.64■■■□□ 2.66
PVT1-201ENST00000504719 PAPPA2Q9BXP8 1791 aa31.63■■■□□ 2.65
PVT1-201ENST00000504719 CFAP100Q494V2 611 aa31.63■■■□□ 2.65
PVT1-201ENST00000504719 MFSD14BQ5SR56 506 aa31.63■■■□□ 2.65
PVT1-201ENST00000504719 APOBEC3FQ8IUX4 373 aaKnown RBP31.63■■■□□ 2.65
PVT1-201ENST00000504719 CIAO1O76071 339 aa31.62■■■□□ 2.65
PVT1-201ENST00000504719 FKBP1BP68106 108 aa31.62■■■□□ 2.65
PVT1-201ENST00000504719 PRAMEF18Q5VWM3 479 aa31.62■■■□□ 2.65
PVT1-201ENST00000504719 PCDHAC2Q9Y5I4 1007 aa31.62■■■□□ 2.65
PVT1-201ENST00000504719 IFIT1P09914 478 aaKnown RBP31.61■■■□□ 2.65
PVT1-201ENST00000504719 SIL1Q9H173 461 aa31.61■■■□□ 2.65
PVT1-201ENST00000504719 PRDM10Q9NQV6 1147 aa31.61■■■□□ 2.65
PVT1-201ENST00000504719 IQSEC3Q9UPP2 1182 aaPredicted RBP31.61■■■□□ 2.65
PVT1-201ENST00000504719 FAM155AB1AL88 458 aaPredicted RBP31.6■■■□□ 2.65
PVT1-201ENST00000504719 BCAMP50895 628 aa31.6■■■□□ 2.65
PVT1-201ENST00000504719 NOGQ13253 232 aa31.6■■■□□ 2.65
PVT1-201ENST00000504719 HSPA8P11142 646 aaKnown RBP31.59■■■□□ 2.65
PVT1-201ENST00000504719 ZKSCAN2Q63HK3 967 aa31.59■■■□□ 2.65
PVT1-201ENST00000504719 LPIN2Q92539 896 aa31.59■■■□□ 2.65
PVT1-201ENST00000504719 CCDC102AQ96A19 550 aa31.59■■■□□ 2.65
PVT1-201ENST00000504719 CLUAP1Q96AJ1 413 aa31.59■■■□□ 2.65
PVT1-201ENST00000504719 YTHDC1Q96MU7 727 aaKnown RBP31.59■■■□□ 2.65
PVT1-201ENST00000504719 BEGAINQ9BUH8 593 aa31.59■■■□□ 2.65
PVT1-201ENST00000504719 SPDYE2BA6NHP3 402 aa31.58■■■□□ 2.65
PVT1-201ENST00000504719 SPDYE6P0CI01 402 aa31.58■■■□□ 2.65
PVT1-201ENST00000504719 SLC5A1P13866 664 aa31.58■■■□□ 2.65
PVT1-201ENST00000504719 ZNF157P51786 506 aaPredicted RBP31.58■■■□□ 2.65
PVT1-201ENST00000504719 PRMT6Q96LA8 375 aaPredicted RBP31.58■■■□□ 2.65
PVT1-201ENST00000504719 ZIC5Q96T25 663 aa31.58■■■□□ 2.65
PVT1-201ENST00000504719 COPRSQ9NQ92 184 aa31.58■■■□□ 2.65
PVT1-201ENST00000504719 TTF2Q9UNY4 1162 aaKnown RBP31.58■■■□□ 2.65
PVT1-201ENST00000504719 PA2G4Q9UQ80 394 aaKnown RBP31.58■■■□□ 2.65
PVT1-201ENST00000504719 MYH13Q9UKX3 1938 aa31.57■■■□□ 2.64
PVT1-201ENST00000504719 FRAT2O75474 233 aaPredicted RBP31.57■■■□□ 2.64
PVT1-201ENST00000504719 LBX1P52954 281 aa31.57■■■□□ 2.64
PVT1-201ENST00000504719 IL15P40933 162 aaPredicted RBP31.56■■■□□ 2.64
PVT1-201ENST00000504719 CHAF1AQ13111 956 aaPredicted RBP31.56■■■□□ 2.64
PVT1-201ENST00000504719 TNS4Q8IZW8 715 aa31.56■■■□□ 2.64
PVT1-201ENST00000504719 TBC1D22AQ8WUA7 517 aa31.56■■■□□ 2.64
PVT1-201ENST00000504719 CEP126Q9P2H0 1117 aa31.56■■■□□ 2.64
PVT1-201ENST00000504719 SERPINA10Q9UK55 444 aa31.56■■■□□ 2.64
PVT1-201ENST00000504719 COL1A1P02452 1464 aaPredicted RBP31.56■■■□□ 2.64
PVT1-201ENST00000504719 MYO1BO43795 1136 aa31.55■■■□□ 2.64
PVT1-201ENST00000504719 NF2P35240 595 aa31.55■■■□□ 2.64
PVT1-201ENST00000504719 RBM5P52756 815 aaKnown RBP eCLIP31.55■■■□□ 2.64
PVT1-201ENST00000504719 MTX1Q13505 466 aa31.55■■■□□ 2.64
PVT1-201ENST00000504719 MOB2Q70IA6 237 aa31.55■■■□□ 2.64
PVT1-201ENST00000504719 AOX1Q06278 1338 aa31.54■■■□□ 2.64
PVT1-201ENST00000504719 SLC10A3P09131 477 aa31.54■■■□□ 2.64
PVT1-201ENST00000504719 TMEM57Q8N5G2 664 aa31.54■■■□□ 2.64
PVT1-201ENST00000504719 DEFB129Q9H1M3 183 aa31.54■■■□□ 2.64
PVT1-201ENST00000504719 SRGAP3O43295 1099 aa31.53■■■□□ 2.64
PVT1-201ENST00000504719 GRIK5Q16478 980 aa31.53■■■□□ 2.64
PVT1-201ENST00000504719 ATP2B3Q16720 1220 aa31.53■■■□□ 2.64
PVT1-201ENST00000504719 CLRN2A0PK11 232 aa31.52■■■□□ 2.64
PVT1-201ENST00000504719 GNAI2P04899 355 aa31.52■■■□□ 2.64
PVT1-201ENST00000504719 PPP2R3BQ9Y5P8 575 aa31.52■■■□□ 2.64
PVT1-201ENST00000504719 UBE2Q2LH0YL09 131 aa31.51■■■□□ 2.63
PVT1-201ENST00000504719 TTLL12Q14166 644 aaPredicted RBP31.51■■■□□ 2.63
PVT1-201ENST00000504719 RASAL3Q86YV0 1011 aa31.51■■■□□ 2.63
PVT1-201ENST00000504719 CRKP46108 304 aa31.5■■■□□ 2.63
PVT1-201ENST00000504719 KIF23Q02241 960 aaPredicted RBP31.5■■■□□ 2.63
PVT1-201ENST00000504719 VEZTQ9HBM0 779 aa31.5■■■□□ 2.63
PVT1-201ENST00000504719 CA12O43570 354 aa31.49■■■□□ 2.63
PVT1-201ENST00000504719 DZIP1LQ8IYY4 767 aaKnown RBP31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms