RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 EPHX2P34913 555 aa10.15□□□□□ -0.78
RFC1-207ENST00000504554 RARSP54136 660 aaKnown RBP10.15□□□□□ -0.78
RFC1-207ENST00000504554 HNRNPUQ00839 825 aaKnown RBP eCLIP10.15□□□□□ -0.78
RFC1-207ENST00000504554 WASHC4Q2M389 1173 aa10.15□□□□□ -0.78
RFC1-207ENST00000504554 ALDH1L2Q3SY69 923 aa10.15□□□□□ -0.78
RFC1-207ENST00000504554 SMC1BQ8NDV3 1235 aa10.15□□□□□ -0.78
RFC1-207ENST00000504554 SRCIN1Q9C0H9 1055 aa10.15□□□□□ -0.78
RFC1-207ENST00000504554 SMC4Q9NTJ3 1288 aa10.15□□□□□ -0.78
RFC1-207ENST00000504554 BSDC1Q9NW68 430 aaPredicted RBP10.15□□□□□ -0.78
RFC1-207ENST00000504554 HACL1Q9UJ83 578 aa10.15□□□□□ -0.78
RFC1-207ENST00000504554 UTYO14607 1347 aa10.14□□□□□ -0.79
RFC1-207ENST00000504554 PTPRCP08575 1304 aa10.14□□□□□ -0.79
RFC1-207ENST00000504554 SNAP23O00161 211 aa10.14□□□□□ -0.79
RFC1-207ENST00000504554 SEMA3EO15041 775 aa10.14□□□□□ -0.79
RFC1-207ENST00000504554 UFL1O94874 794 aa10.14□□□□□ -0.79
RFC1-207ENST00000504554 KLRK1P26718 216 aa10.14□□□□□ -0.79
RFC1-207ENST00000504554 GMPSP49915 693 aaPredicted RBP10.14□□□□□ -0.79
RFC1-207ENST00000504554 EAPPQ56P03 285 aaPredicted RBP10.14□□□□□ -0.79
RFC1-207ENST00000504554 LMBR1LQ6UX01 489 aa10.14□□□□□ -0.79
RFC1-207ENST00000504554 TXNRD3Q86VQ6 643 aa10.14□□□□□ -0.79
RFC1-207ENST00000504554 ZNF594Q96JF6 807 aaPredicted RBP10.14□□□□□ -0.79
RFC1-207ENST00000504554 KCNK17Q96T54 332 aa10.14□□□□□ -0.79
RFC1-207ENST00000504554 CDC5LQ99459 802 aaKnown RBP10.14□□□□□ -0.79
RFC1-207ENST00000504554 ANKIB1Q9P2G1 1089 aa10.14□□□□□ -0.79
RFC1-207ENST00000504554 GGA1Q9UJY5 639 aa10.14□□□□□ -0.79
RFC1-207ENST00000504554 NOB1Q9ULX3 412 aaKnown RBP10.14□□□□□ -0.79
RFC1-207ENST00000504554 TNNQ9UQP3 1299 aa10.14□□□□□ -0.79
RFC1-207ENST00000504554 XDHP47989 1333 aa10.13□□□□□ -0.79
RFC1-207ENST00000504554 IQCA1LA6NCM1 817 aa10.13□□□□□ -0.79
RFC1-207ENST00000504554 PSMD14O00487 310 aa10.13□□□□□ -0.79
RFC1-207ENST00000504554 ECE2O60344 883 aa10.13□□□□□ -0.79
RFC1-207ENST00000504554 CIAPIN1Q6FI81 312 aa10.13□□□□□ -0.79
RFC1-207ENST00000504554 DNAJC5GQ8N7S2 189 aa10.13□□□□□ -0.79
RFC1-207ENST00000504554 ANKRD44Q8N8A2 993 aa10.13□□□□□ -0.79
RFC1-207ENST00000504554 USP44Q9H0E7 712 aa10.13□□□□□ -0.79
RFC1-207ENST00000504554 C9orf78Q9NZ63 289 aaPredicted RBP10.13□□□□□ -0.79
RFC1-207ENST00000504554 HCSTQ9UBK5 93 aa10.13□□□□□ -0.79
RFC1-207ENST00000504554 ADAMTSL1Q8N6G6 1762 aa10.13□□□□□ -0.79
RFC1-207ENST00000504554 IRS2Q9Y4H2 1338 aa10.12□□□□□ -0.79
RFC1-207ENST00000504554 BCAR3O75815 825 aa10.12□□□□□ -0.79
RFC1-207ENST00000504554 ITGBL1O95965 494 aaPredicted RBP10.12□□□□□ -0.79
RFC1-207ENST00000504554 CT47B1P0C2W7 299 aaPredicted RBP10.12□□□□□ -0.79
RFC1-207ENST00000504554 ATP2B4P23634 1241 aa10.12□□□□□ -0.79
RFC1-207ENST00000504554 IGHMBP2P38935 993 aaKnown RBP10.12□□□□□ -0.79
RFC1-207ENST00000504554 CCT4P50991 539 aaKnown RBP10.12□□□□□ -0.79
RFC1-207ENST00000504554 APLP1P51693 650 aa10.12□□□□□ -0.79
RFC1-207ENST00000504554 HIRAP54198 1017 aaPredicted RBP10.12□□□□□ -0.79
RFC1-207ENST00000504554 BRPF1P55201 1214 aaPredicted RBP10.12□□□□□ -0.79
RFC1-207ENST00000504554 FMR1Q06787 632 aaKnown RBP eCLIP10.12□□□□□ -0.79
RFC1-207ENST00000504554 MAP1SQ66K74 1059 aaPredicted RBP10.12□□□□□ -0.79
RFC1-207ENST00000504554 LDHDQ86WU2 507 aa10.12□□□□□ -0.79
RFC1-207ENST00000504554 ZNF454Q8N9F8 522 aa10.12□□□□□ -0.79
RFC1-207ENST00000504554 HELBQ8NG08 1087 aaPredicted RBP10.12□□□□□ -0.79
RFC1-207ENST00000504554 TRPM4Q8TD43 1214 aa10.12□□□□□ -0.79
RFC1-207ENST00000504554 EYA3Q99504 573 aa10.12□□□□□ -0.79
RFC1-207ENST00000504554 BICC1Q9H694 974 aaKnown RBP10.12□□□□□ -0.79
RFC1-207ENST00000504554 GPRC5DQ9NZD1 345 aa10.12□□□□□ -0.79
RFC1-207ENST00000504554 CHMP3Q9Y3E7 222 aa10.12□□□□□ -0.79
RFC1-207ENST00000504554 CACNA1FO60840 1977 aa10.12□□□□□ -0.79
RFC1-207ENST00000504554 PASKQ96RG2 1323 aa10.11□□□□□ -0.79
RFC1-207ENST00000504554 ANKRD18BA2A2Z9 1011 aa10.11□□□□□ -0.79
RFC1-207ENST00000504554 TAF5LO75529 589 aa10.11□□□□□ -0.79
RFC1-207ENST00000504554 EGFRP00533 1210 aa10.11□□□□□ -0.79
RFC1-207ENST00000504554 CHRNDQ07001 517 aa10.11□□□□□ -0.79
RFC1-207ENST00000504554 IFIT5Q13325 482 aaKnown RBP10.11□□□□□ -0.79
RFC1-207ENST00000504554 MXD3Q9BW11 206 aa10.11□□□□□ -0.79
RFC1-207ENST00000504554 PUS3Q9BZE2 481 aaKnown RBP10.11□□□□□ -0.79
RFC1-207ENST00000504554 ZC3H12CQ9C0D7 883 aaKnown RBP10.11□□□□□ -0.79
RFC1-207ENST00000504554 SCN4AP35499 1836 aa10.1□□□□□ -0.79
RFC1-207ENST00000504554 VIL1P09327 827 aaKnown RBP10.1□□□□□ -0.79
RFC1-207ENST00000504554 LMOD1P29536 600 aaPredicted RBP10.1□□□□□ -0.79
RFC1-207ENST00000504554 TNIP1Q15025 636 aa10.1□□□□□ -0.79
RFC1-207ENST00000504554 RABL6Q3YEC7 729 aaPredicted RBP10.1□□□□□ -0.79
RFC1-207ENST00000504554 CNOT7Q9UIV1 285 aaKnown RBP10.1□□□□□ -0.79
RFC1-207ENST00000504554 MED23Q9ULK4 1368 aa10.1□□□□□ -0.79
RFC1-207ENST00000504554 SPEF2Q9C093 1822 aa10.1□□□□□ -0.79
RFC1-207ENST00000504554 ZNF804BA4D1E1 1349 aa10.09□□□□□ -0.79
RFC1-207ENST00000504554 SCN9AQ15858 1988 aa10.09□□□□□ -0.79
RFC1-207ENST00000504554 SMYD5Q6GMV2 418 aa10.09□□□□□ -0.79
RFC1-207ENST00000504554 DLK2Q6UY11 383 aa10.09□□□□□ -0.79
RFC1-207ENST00000504554 SAMD7Q7Z3H4 446 aa10.09□□□□□ -0.79
RFC1-207ENST00000504554 PNMA8AQ86V59 439 aaPredicted RBP10.09□□□□□ -0.79
RFC1-207ENST00000504554 CNTROBQ8N137 903 aa10.09□□□□□ -0.79
RFC1-207ENST00000504554 KLHDC4Q8TBB5 520 aa10.09□□□□□ -0.79
RFC1-207ENST00000504554 MPHOSPH8Q99549 860 aa10.09□□□□□ -0.79
RFC1-207ENST00000504554 ADARB2Q9NS39 739 aaKnown RBP10.09□□□□□ -0.79
RFC1-207ENST00000504554 LEMD3Q9Y2U8 911 aa10.09□□□□□ -0.79
RFC1-207ENST00000504554 MYH3P11055 1940 aa10.09□□□□□ -0.79
RFC1-207ENST00000504554 TRAF5O00463 557 aa10.08□□□□□ -0.8
RFC1-207ENST00000504554 RFX5P48382 616 aaPredicted RBP10.08□□□□□ -0.8
RFC1-207ENST00000504554 FOSBP53539 338 aa10.08□□□□□ -0.8
RFC1-207ENST00000504554 CCDC57Q2TAC2 916 aa10.08□□□□□ -0.8
RFC1-207ENST00000504554 LRRC24Q50LG9 513 aa10.08□□□□□ -0.8
RFC1-207ENST00000504554 LDHAL6AQ6ZMR3 332 aa10.08□□□□□ -0.8
RFC1-207ENST00000504554 USP50Q70EL3 339 aaPredicted RBP10.08□□□□□ -0.8
RFC1-207ENST00000504554 DPF2Q92785 391 aa10.08□□□□□ -0.8
RFC1-207ENST00000504554 GMLQ99445 158 aa10.08□□□□□ -0.8
RFC1-207ENST00000504554 PLA2G2EQ9NZK7 142 aa10.08□□□□□ -0.8
RFC1-207ENST00000504554 VPS9D1Q9Y2B5 631 aa10.08□□□□□ -0.8
RFC1-207ENST00000504554 RIPOR2Q9Y4F9 1068 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms