RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 TRAPPC3LQ5T215 181 aa10.19□□□□□ -0.78
UBE2D3-217ENST00000504211 MAP4K3Q8IVH8 894 aa10.19□□□□□ -0.78
UBE2D3-217ENST00000504211 FMR1NBQ8N0W7 255 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-217ENST00000504211 FOXD4L4Q8WXT5 416 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-217ENST00000504211 WNT8BQ93098 351 aa10.19□□□□□ -0.78
UBE2D3-217ENST00000504211 PPP4R2Q9NY27 417 aa10.19□□□□□ -0.78
UBE2D3-217ENST00000504211 FAM8A1Q9UBU6 413 aa10.19□□□□□ -0.78
UBE2D3-217ENST00000504211 A0A0A0MRY4 1105 aa10.18□□□□□ -0.78
UBE2D3-217ENST00000504211 EIF4BP23588 611 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-217ENST00000504211 GSTT1P30711 240 aa10.18□□□□□ -0.78
UBE2D3-217ENST00000504211 PSMD2Q13200 908 aa10.18□□□□□ -0.78
UBE2D3-217ENST00000504211 RPS26P11Q5JNZ5 115 aaPredicted RBP10.18□□□□□ -0.78
UBE2D3-217ENST00000504211 ALYREFQ86V81 257 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-217ENST00000504211 CLEC4MQ9H2X3 399 aaPredicted RBP10.18□□□□□ -0.78
UBE2D3-217ENST00000504211 TM4SF5O14894 197 aa10.17□□□□□ -0.78
UBE2D3-217ENST00000504211 DEAF1O75398 565 aaPredicted RBP10.17□□□□□ -0.78
UBE2D3-217ENST00000504211 COL8A1P27658 744 aa10.17□□□□□ -0.78
UBE2D3-217ENST00000504211 FCGRTP55899 365 aa10.17□□□□□ -0.78
UBE2D3-217ENST00000504211 RAC1P63000 192 aa10.17□□□□□ -0.78
UBE2D3-217ENST00000504211 PIP4K2BP78356 416 aa10.17□□□□□ -0.78
UBE2D3-217ENST00000504211 SETDB1Q15047 1291 aa10.17□□□□□ -0.78
UBE2D3-217ENST00000504211 ANKRD24Q8TF21 1146 aa10.17□□□□□ -0.78
UBE2D3-217ENST00000504211 ZFYVE1Q9HBF4 777 aa10.17□□□□□ -0.78
UBE2D3-217ENST00000504211 USP17L7P0C7H9 530 aa10.16□□□□□ -0.78
UBE2D3-217ENST00000504211 ESRRAP11474 423 aaPredicted RBP10.16□□□□□ -0.78
UBE2D3-217ENST00000504211 ITGAEP38570 1179 aa10.16□□□□□ -0.78
UBE2D3-217ENST00000504211 FAM117BQ6P1L5 589 aa10.16□□□□□ -0.78
UBE2D3-217ENST00000504211 DTHD1Q6ZMT9 781 aa10.16□□□□□ -0.78
UBE2D3-217ENST00000504211 FBXO11Q86XK2 927 aa10.16□□□□□ -0.78
UBE2D3-217ENST00000504211 FAM161BQ96MY7 647 aa10.16□□□□□ -0.78
UBE2D3-217ENST00000504211 SOX17Q9H6I2 414 aaPredicted RBP10.16□□□□□ -0.78
UBE2D3-217ENST00000504211 LINC01387J3KSC0 135 aa10.15□□□□□ -0.78
UBE2D3-217ENST00000504211 B3GALT4O96024 378 aa10.15□□□□□ -0.78
UBE2D3-217ENST00000504211 PCDH1Q08174 1060 aa10.15□□□□□ -0.78
UBE2D3-217ENST00000504211 IKBKEQ14164 716 aa10.15□□□□□ -0.78
UBE2D3-217ENST00000504211 MRPL58Q14197 206 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-217ENST00000504211 PRRT3Q5FWE3 981 aa10.15□□□□□ -0.78
UBE2D3-217ENST00000504211 TXNDC11Q6PKC3 985 aa10.15□□□□□ -0.78
UBE2D3-217ENST00000504211 DCAF11Q8TEB1 546 aa10.15□□□□□ -0.78
UBE2D3-217ENST00000504211 PPM1HQ9ULR3 514 aa10.15□□□□□ -0.78
UBE2D3-217ENST00000504211 FSCN2O14926 492 aa10.14□□□□□ -0.79
UBE2D3-217ENST00000504211 SORBS3O60504 671 aa10.14□□□□□ -0.79
UBE2D3-217ENST00000504211 SPATA31C1P0DKV0 1188 aa10.14□□□□□ -0.79
UBE2D3-217ENST00000504211 ELNP15502 786 aa10.14□□□□□ -0.79
UBE2D3-217ENST00000504211 TRIM28Q13263 835 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-217ENST00000504211 BCL11AQ9H165 835 aa10.14□□□□□ -0.79
UBE2D3-217ENST00000504211 OSGEPQ9NPF4 335 aa10.14□□□□□ -0.79
UBE2D3-217ENST00000504211 SOX1O00570 391 aaPredicted RBP10.13□□□□□ -0.79
UBE2D3-217ENST00000504211 ZNF423Q2M1K9 1284 aa10.13□□□□□ -0.79
UBE2D3-217ENST00000504211 KLHL23Q8NBE8 558 aa10.13□□□□□ -0.79
UBE2D3-217ENST00000504211 MRS2Q9HD23 443 aa10.13□□□□□ -0.79
UBE2D3-217ENST00000504211 FAM229AH3BQW9 127 aa10.12□□□□□ -0.79
UBE2D3-217ENST00000504211 DLL1O00548 723 aa10.12□□□□□ -0.79
UBE2D3-217ENST00000504211 CDC25BP30305 580 aa10.12□□□□□ -0.79
UBE2D3-217ENST00000504211 FAAP100Q0VG06 881 aa10.12□□□□□ -0.79
UBE2D3-217ENST00000504211 KCNMA1Q12791 1236 aa10.12□□□□□ -0.79
UBE2D3-217ENST00000504211 GALNT11Q8NCW6 608 aa10.12□□□□□ -0.79
UBE2D3-217ENST00000504211 CRELD1Q96HD1 420 aa10.12□□□□□ -0.79
UBE2D3-217ENST00000504211 SEC31BQ9NQW1 1179 aa10.12□□□□□ -0.79
UBE2D3-217ENST00000504211 GSK3AP49840 483 aa10.11□□□□□ -0.79
UBE2D3-217ENST00000504211 C19orf57Q0VDD7 668 aa10.11□□□□□ -0.79
UBE2D3-217ENST00000504211 AKAP2Q9Y2D5 859 aa10.11□□□□□ -0.79
UBE2D3-217ENST00000504211 EIF4EBP3O60516 100 aaPredicted RBP10.1□□□□□ -0.79
UBE2D3-217ENST00000504211 CTSHP09668 335 aa10.1□□□□□ -0.79
UBE2D3-217ENST00000504211 VAMP1P23763 118 aa10.1□□□□□ -0.79
UBE2D3-217ENST00000504211 HGSNATQ68CP4 663 aa10.1□□□□□ -0.79
UBE2D3-217ENST00000504211 CARD10Q9BWT7 1032 aa10.1□□□□□ -0.79
UBE2D3-217ENST00000504211 VTI1BQ9UEU0 232 aa10.1□□□□□ -0.79
UBE2D3-217ENST00000504211 ARL4DP49703 201 aa10.09□□□□□ -0.79
UBE2D3-217ENST00000504211 FOXD4L6Q3SYB3 417 aaPredicted RBP10.09□□□□□ -0.79
UBE2D3-217ENST00000504211 FOXD4L3Q6VB84 417 aaPredicted RBP10.09□□□□□ -0.79
UBE2D3-217ENST00000504211 SLC7A3Q8WY07 619 aa10.09□□□□□ -0.79
UBE2D3-217ENST00000504211 KLHDC7BQ96G42 594 aa10.09□□□□□ -0.79
UBE2D3-217ENST00000504211 NRSN2Q9GZP1 204 aa10.09□□□□□ -0.79
UBE2D3-217ENST00000504211 UNCXA6NJT0 531 aa10.08□□□□□ -0.8
UBE2D3-217ENST00000504211 CD68P34810 354 aaPredicted RBP10.08□□□□□ -0.8
UBE2D3-217ENST00000504211 ST13P50502 369 aaKnown RBP10.08□□□□□ -0.8
UBE2D3-217ENST00000504211 SUZ12Q15022 739 aaKnown RBP10.08□□□□□ -0.8
UBE2D3-217ENST00000504211 IGF2-ASQ6U949 168 aa10.07□□□□□ -0.8
UBE2D3-217ENST00000504211 DDX54Q8TDD1 881 aaKnown RBP10.07□□□□□ -0.8
UBE2D3-217ENST00000504211 DCAF5Q96JK2 942 aa10.07□□□□□ -0.8
UBE2D3-217ENST00000504211 CEP44Q9C0F1 390 aa10.07□□□□□ -0.8
UBE2D3-217ENST00000504211 USP31Q70CQ4 1352 aa10.06□□□□□ -0.8
UBE2D3-217ENST00000504211 ADAM11O75078 769 aa10.06□□□□□ -0.8
UBE2D3-217ENST00000504211 NECAB3Q96P71 396 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-217ENST00000504211 NACC1Q96RE7 527 aa10.06□□□□□ -0.8
UBE2D3-217ENST00000504211 TRIM56Q9BRZ2 755 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-217ENST00000504211 TMEM39AQ9NV64 488 aa10.06□□□□□ -0.8
UBE2D3-217ENST00000504211 TTF2Q9UNY4 1162 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-217ENST00000504211 KRBA1A5PL33 1030 aa10.05□□□□□ -0.8
UBE2D3-217ENST00000504211 SELPP16109 830 aa10.05□□□□□ -0.8
UBE2D3-217ENST00000504211 RASSF7Q02833 373 aa10.05□□□□□ -0.8
UBE2D3-217ENST00000504211 GRIK4Q16099 956 aa10.05□□□□□ -0.8
UBE2D3-217ENST00000504211 MEI1Q5TIA1 1274 aa10.05□□□□□ -0.8
UBE2D3-217ENST00000504211 TPTE2Q6XPS3 522 aa10.05□□□□□ -0.8
UBE2D3-217ENST00000504211 KCNK4Q9NYG8 393 aa10.05□□□□□ -0.8
UBE2D3-217ENST00000504211 KIAA1522Q9P206 1035 aaPredicted RBP10.05□□□□□ -0.8
UBE2D3-217ENST00000504211 GPN3Q9UHW5 284 aaPredicted RBP10.05□□□□□ -0.8
UBE2D3-217ENST00000504211 ENC1O14682 589 aa10.04□□□□□ -0.8
UBE2D3-217ENST00000504211 GSTM4Q03013 218 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms