RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 SPRED2Q7Z698 418 aa5.1□□□□□ -1.59
HMGB3P17-201ENST00000504195 NLRP13Q86W25 1043 aa5.1□□□□□ -1.59
HMGB3P17-201ENST00000504195 ZSWIM9Q86XI8 627 aa5.1□□□□□ -1.59
HMGB3P17-201ENST00000504195 PI4K2BQ8TCG2 481 aa5.1□□□□□ -1.59
HMGB3P17-201ENST00000504195 SLC7A3Q8WY07 619 aa5.1□□□□□ -1.59
HMGB3P17-201ENST00000504195 VTI1AQ96AJ9 217 aa5.1□□□□□ -1.59
HMGB3P17-201ENST00000504195 RASSF4Q9H2L5 321 aa5.1□□□□□ -1.59
HMGB3P17-201ENST00000504195 OPLAHO14841 1288 aa5.09□□□□□ -1.59
HMGB3P17-201ENST00000504195 FOXO3O43524 673 aa5.09□□□□□ -1.59
HMGB3P17-201ENST00000504195 SCNN1AP37088 669 aa5.09□□□□□ -1.59
HMGB3P17-201ENST00000504195 KCNMB1Q16558 191 aa5.09□□□□□ -1.59
HMGB3P17-201ENST00000504195 SYDE1Q6ZW31 735 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P17-201ENST00000504195 ZNF765Q7L2R6 523 aa5.09□□□□□ -1.59
HMGB3P17-201ENST00000504195 LRRN4CLQ8ND94 238 aa5.09□□□□□ -1.59
HMGB3P17-201ENST00000504195 NFIBO00712 420 aa5.08□□□□□ -1.6
HMGB3P17-201ENST00000504195 CDPF1Q6NVV7 123 aa5.08□□□□□ -1.6
HMGB3P17-201ENST00000504195 LARP1Q6PKG0 1096 aaKnown RBP5.08□□□□□ -1.6
HMGB3P17-201ENST00000504195 SMG8Q8ND04 991 aaKnown RBP5.08□□□□□ -1.6
HMGB3P17-201ENST00000504195 OR13H1Q8NG92 308 aa5.08□□□□□ -1.6
HMGB3P17-201ENST00000504195 ZMYND15Q9H091 742 aa5.08□□□□□ -1.6
HMGB3P17-201ENST00000504195 MBNL3Q9NUK0 354 aaKnown RBP5.08□□□□□ -1.6
HMGB3P17-201ENST00000504195 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB3P17-201ENST00000504195 SLC24A1O60721 1099 aa5.07□□□□□ -1.6
HMGB3P17-201ENST00000504195 TIAF1O95411 115 aa5.07□□□□□ -1.6
HMGB3P17-201ENST00000504195 BNIP3Q12983 259 aa5.07□□□□□ -1.6
HMGB3P17-201ENST00000504195 MAP7Q14244 749 aa5.07□□□□□ -1.6
HMGB3P17-201ENST00000504195 WFDC3Q8IUB2 231 aa5.07□□□□□ -1.6
HMGB3P17-201ENST00000504195 RELTQ969Z4 430 aa5.07□□□□□ -1.6
HMGB3P17-201ENST00000504195 QTRT2Q9H974 415 aaKnown RBP5.07□□□□□ -1.6
HMGB3P17-201ENST00000504195 SUGCTQ9HAC7 445 aa5.07□□□□□ -1.6
HMGB3P17-201ENST00000504195 KCNMB2Q9Y691 235 aa5.07□□□□□ -1.6
HMGB3P17-201ENST00000504195 RAD21O60216 631 aa5.06□□□□□ -1.6
HMGB3P17-201ENST00000504195 TREML1Q86YW5 311 aa5.06□□□□□ -1.6
HMGB3P17-201ENST00000504195 USP26Q9BXU7 913 aa5.06□□□□□ -1.6
HMGB3P17-201ENST00000504195 TMPRSS13Q9BYE2 586 aa5.06□□□□□ -1.6
HMGB3P17-201ENST00000504195 PBX4Q9BYU1 374 aa5.06□□□□□ -1.6
HMGB3P17-201ENST00000504195 FAM13BQ9NYF5 915 aa5.06□□□□□ -1.6
HMGB3P17-201ENST00000504195 ADAMTS6Q9UKP5 1117 aa5.06□□□□□ -1.6
HMGB3P17-201ENST00000504195 CD8BP10966 210 aa5.05□□□□□ -1.6
HMGB3P17-201ENST00000504195 C19orf57Q0VDD7 668 aa5.05□□□□□ -1.6
HMGB3P17-201ENST00000504195 COL13A1Q5TAT6 717 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P17-201ENST00000504195 ADAMTSL4Q6UY14 1074 aa5.05□□□□□ -1.6
HMGB3P17-201ENST00000504195 NCAPG2Q86XI2 1143 aa5.05□□□□□ -1.6
HMGB3P17-201ENST00000504195 EZH1Q92800 747 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P17-201ENST00000504195 UCN2Q96RP3 112 aa5.05□□□□□ -1.6
HMGB3P17-201ENST00000504195 DRD2P14416 443 aa5.04□□□□□ -1.6
HMGB3P17-201ENST00000504195 RAB6AP20340 208 aa5.04□□□□□ -1.6
HMGB3P17-201ENST00000504195 HDGFL1Q5TGJ6 251 aa5.04□□□□□ -1.6
HMGB3P17-201ENST00000504195 TTC39BQ5VTQ0 682 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P17-201ENST00000504195 AMIGO3Q86WK7 504 aa5.04□□□□□ -1.6
HMGB3P17-201ENST00000504195 GATA6Q92908 595 aa5.04□□□□□ -1.6
HMGB3P17-201ENST00000504195 ZNF503-AS2A6NEH8 195 aa5.03□□□□□ -1.6
HMGB3P17-201ENST00000504195 C1QTNF9P0C862 333 aa5.03□□□□□ -1.6
HMGB3P17-201ENST00000504195 CIAPIN1Q6FI81 312 aa5.03□□□□□ -1.6
HMGB3P17-201ENST00000504195 MPZL3Q6UWV2 235 aa5.03□□□□□ -1.6
HMGB3P17-201ENST00000504195 FLAD1Q8NFF5 587 aa5.03□□□□□ -1.6
HMGB3P17-201ENST00000504195 FNDC3AQ9Y2H6 1198 aaKnown RBP5.03□□□□□ -1.6
HMGB3P17-201ENST00000504195 NPIPB6E9PJ23 425 aa5.02□□□□□ -1.61
HMGB3P17-201ENST00000504195 UBAP1LF5GYI3 381 aa5.02□□□□□ -1.61
HMGB3P17-201ENST00000504195 KIF4AO95239 1232 aa5.02□□□□□ -1.61
HMGB3P17-201ENST00000504195 HOXA5P20719 270 aa5.02□□□□□ -1.61
HMGB3P17-201ENST00000504195 WEE1P30291 646 aa5.02□□□□□ -1.61
HMGB3P17-201ENST00000504195 DPYDQ12882 1025 aa5.02□□□□□ -1.61
HMGB3P17-201ENST00000504195 CYP27C1Q4G0S4 372 aa5.02□□□□□ -1.61
HMGB3P17-201ENST00000504195 C2CD4AQ8NCU7 369 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P17-201ENST00000504195 NETO1Q8TDF5 533 aa5.02□□□□□ -1.61
HMGB3P17-201ENST00000504195 ADAMTS19Q8TE59 1207 aa5.02□□□□□ -1.61
HMGB3P17-201ENST00000504195 BORCS6Q96GS4 357 aa5.02□□□□□ -1.61
HMGB3P17-201ENST00000504195 LIN37Q96GY3 246 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P17-201ENST00000504195 POP1Q99575 1024 aaKnown RBP5.02□□□□□ -1.61
HMGB3P17-201ENST00000504195 FAM196BA6NMK8 535 aa5.01□□□□□ -1.61
HMGB3P17-201ENST00000504195 LGR5O75473 907 aa5.01□□□□□ -1.61
HMGB3P17-201ENST00000504195 NFICP08651 508 aa5.01□□□□□ -1.61
HMGB3P17-201ENST00000504195 SOX4Q06945 474 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P17-201ENST00000504195 PTK7Q13308 1070 aa5.01□□□□□ -1.61
HMGB3P17-201ENST00000504195 TRIP4Q15650 581 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P17-201ENST00000504195 EXOSC6Q5RKV6 272 aaKnown RBP5.01□□□□□ -1.61
HMGB3P17-201ENST00000504195 ANGEL2Q5VTE6 544 aaKnown RBP5.01□□□□□ -1.61
HMGB3P17-201ENST00000504195 PIK3R5Q8WYR1 880 aa5.01□□□□□ -1.61
HMGB3P17-201ENST00000504195 VAV3Q9UKW4 847 aa5.01□□□□□ -1.61
HMGB3P17-201ENST00000504195 LRFN2Q9ULH4 789 aa5.01□□□□□ -1.61
HMGB3P17-201ENST00000504195 LOC100289279A0A1B0GTE1 492 aa5□□□□□ -1.61
HMGB3P17-201ENST00000504195 EIF4EBP3O60516 100 aaPredicted RBP5□□□□□ -1.61
HMGB3P17-201ENST00000504195 BRD2P25440 801 aaKnown RBP5□□□□□ -1.61
HMGB3P17-201ENST00000504195 PRKCQQ04759 706 aa5□□□□□ -1.61
HMGB3P17-201ENST00000504195 ANKMY2Q8IV38 441 aa5□□□□□ -1.61
HMGB3P17-201ENST00000504195 PLD6Q8N2A8 252 aaKnown RBP5□□□□□ -1.61
HMGB3P17-201ENST00000504195 CRIM1Q9NZV1 1036 aa5□□□□□ -1.61
HMGB3P17-201ENST00000504195 CD96P40200 585 aa4.99□□□□□ -1.61
HMGB3P17-201ENST00000504195 SLC23A3Q6PIS1 610 aa4.99□□□□□ -1.61
HMGB3P17-201ENST00000504195 ARHGAP27Q6ZUM4 889 aa4.99□□□□□ -1.61
HMGB3P17-201ENST00000504195 FBXO15Q8NCQ5 510 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P17-201ENST00000504195 C20orf173Q96LM9 149 aa4.99□□□□□ -1.61
HMGB3P17-201ENST00000504195 MAFBQ9Y5Q3 323 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P17-201ENST00000504195 POM121CA8CG34 1229 aa4.98□□□□□ -1.61
HMGB3P17-201ENST00000504195 TMEM253P0C7T8 217 aa4.98□□□□□ -1.61
HMGB3P17-201ENST00000504195 ADH5P11766 374 aa4.98□□□□□ -1.61
HMGB3P17-201ENST00000504195 SYN1P17600 705 aa4.98□□□□□ -1.61
HMGB3P17-201ENST00000504195 KRTAP1-1Q07627 177 aa4.98□□□□□ -1.61
HMGB3P17-201ENST00000504195 KCNA10Q16322 511 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms