RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 RCAN3Q9UKA8 241 aa13.07□□□□□ -0.32
FXR1-222ENST00000498658 SLC5A1P13866 664 aa13.06□□□□□ -0.32
FXR1-222ENST00000498658 FBXO33Q7Z6M2 555 aa13.06□□□□□ -0.32
FXR1-222ENST00000498658 SULF1Q8IWU6 871 aa13.06□□□□□ -0.32
FXR1-222ENST00000498658 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.06□□□□□ -0.32
FXR1-222ENST00000498658 TDRD7Q8NHU6 1098 aaKnown RBP13.06□□□□□ -0.32
FXR1-222ENST00000498658 FAM84BQ96KN1 310 aaPredicted RBP13.06□□□□□ -0.32
FXR1-222ENST00000498658 TNNQ9UQP3 1299 aa13.06□□□□□ -0.32
FXR1-222ENST00000498658 FAM205AQ6ZU69 1335 aa13.06□□□□□ -0.32
FXR1-222ENST00000498658 FRAT2O75474 233 aaPredicted RBP13.05□□□□□ -0.32
FXR1-222ENST00000498658 FGFR2P21802 821 aa13.05□□□□□ -0.32
FXR1-222ENST00000498658 GYG1P46976 350 aa13.05□□□□□ -0.32
FXR1-222ENST00000498658 HTRA3P83110 453 aa13.05□□□□□ -0.32
FXR1-222ENST00000498658 SCARF1Q14162 830 aa13.05□□□□□ -0.32
FXR1-222ENST00000498658 ATG9AQ7Z3C6 839 aa13.05□□□□□ -0.32
FXR1-222ENST00000498658 KRT26Q7Z3Y9 468 aa13.05□□□□□ -0.32
FXR1-222ENST00000498658 TBC1D22AQ8WUA7 517 aa13.05□□□□□ -0.32
FXR1-222ENST00000498658 SIL1Q9H173 461 aa13.05□□□□□ -0.32
FXR1-222ENST00000498658 PITPNM2Q9BZ72 1349 aa13.05□□□□□ -0.32
FXR1-222ENST00000498658 ZBTB7BO15156 539 aaPredicted RBP13.04□□□□□ -0.32
FXR1-222ENST00000498658 ATP2B3Q16720 1220 aa13.04□□□□□ -0.32
FXR1-222ENST00000498658 KIAA0825Q8IV33 1275 aa13.04□□□□□ -0.32
FXR1-222ENST00000498658 GLIS2Q9BZE0 524 aaPredicted RBP13.04□□□□□ -0.32
FXR1-222ENST00000498658 GNL3LQ9NVN8 582 aaKnown RBP13.04□□□□□ -0.32
FXR1-222ENST00000498658 ABT1Q9ULW3 272 aaKnown RBP13.04□□□□□ -0.32
FXR1-222ENST00000498658 AKAP2Q9Y2D5 859 aa13.04□□□□□ -0.32
FXR1-222ENST00000498658 TRPM7Q96QT4 1865 aa13.04□□□□□ -0.32
FXR1-222ENST00000498658 TRAF5O00463 557 aa13.03□□□□□ -0.32
FXR1-222ENST00000498658 EGFRP00533 1210 aa13.03□□□□□ -0.32
FXR1-222ENST00000498658 G3BP1Q13283 466 aaKnown RBP eCLIP13.03□□□□□ -0.325e-6■■□□□ 11.9
FXR1-222ENST00000498658 MFSD14BQ5SR56 506 aa13.03□□□□□ -0.32
FXR1-222ENST00000498658 MXD3Q9BW11 206 aa13.03□□□□□ -0.32
FXR1-222ENST00000498658 GGA3Q9NZ52 723 aa13.03□□□□□ -0.32
FXR1-222ENST00000498658 ZNF646O15015 1829 aaPredicted RBP13.03□□□□□ -0.32
FXR1-222ENST00000498658 RASSF10A6NK89 507 aa13.02□□□□□ -0.33
FXR1-222ENST00000498658 WNT10BO00744 389 aa13.02□□□□□ -0.33
FXR1-222ENST00000498658 MYO1BO43795 1136 aa13.02□□□□□ -0.33
FXR1-222ENST00000498658 CELF2O95319 508 aaKnown RBP13.02□□□□□ -0.33
FXR1-222ENST00000498658 RLBP1P12271 317 aa13.02□□□□□ -0.33
FXR1-222ENST00000498658 ATP8B2P98198 1209 aa13.02□□□□□ -0.33
FXR1-222ENST00000498658 DLGAP5Q15398 846 aa13.02□□□□□ -0.33
FXR1-222ENST00000498658 DEFB115Q30KQ5 88 aa13.02□□□□□ -0.33
FXR1-222ENST00000498658 ANGEL2Q5VTE6 544 aaKnown RBP13.02□□□□□ -0.33
FXR1-222ENST00000498658 USP48Q86UV5 1035 aa13.02□□□□□ -0.33
FXR1-222ENST00000498658 JMYQ8N9B5 988 aa13.02□□□□□ -0.33
FXR1-222ENST00000498658 MTMR14Q8NCE2 650 aa13.02□□□□□ -0.33
FXR1-222ENST00000498658 DDX19BQ9UMR2 479 aa13.02□□□□□ -0.33
FXR1-222ENST00000498658 PA2G4Q9UQ80 394 aaKnown RBP13.02□□□□□ -0.33
FXR1-222ENST00000498658 SUGT1Q9Y2Z0 365 aa13.02□□□□□ -0.33
FXR1-222ENST00000498658 CNTNAP1P78357 1384 aa13.02□□□□□ -0.33
FXR1-222ENST00000498658 SEMA3EO15041 775 aa13.01□□□□□ -0.33
FXR1-222ENST00000498658 ECE1P42892 770 aa13.01□□□□□ -0.33
FXR1-222ENST00000498658 BCAMP50895 628 aa13.01□□□□□ -0.33
FXR1-222ENST00000498658 MVPQ14764 893 aaKnown RBP13.01□□□□□ -0.33
FXR1-222ENST00000498658 CST9Q5W186 159 aa13.01□□□□□ -0.33
FXR1-222ENST00000498658 APOBEC3FQ8IUX4 373 aaKnown RBP13.01□□□□□ -0.33
FXR1-222ENST00000498658 CERS5Q8N5B7 392 aa13.01□□□□□ -0.33
FXR1-222ENST00000498658 WDR66Q8TBY9 1149 aa13.01□□□□□ -0.33
FXR1-222ENST00000498658 PANK1Q8TE04 598 aa13.01□□□□□ -0.33
FXR1-222ENST00000498658 HHIPL1Q96JK4 782 aa13.01□□□□□ -0.33
FXR1-222ENST00000498658 MKRN1Q9UHC7 482 aaKnown RBP13.01□□□□□ -0.33
FXR1-222ENST00000498658 SERPINA10Q9UK55 444 aa13.01□□□□□ -0.33
FXR1-222ENST00000498658 POLR2AP24928 1970 aaKnown RBP13□□□□□ -0.33
FXR1-222ENST00000498658 PNMA6EA0A0J9YXQ4 647 aa13□□□□□ -0.33
FXR1-222ENST00000498658 PDE3AQ14432 1141 aa13□□□□□ -0.33
FXR1-222ENST00000498658 NBPF9Q3BBW0 867 aa13□□□□□ -0.33
FXR1-222ENST00000498658 C2orf69Q8N8R5 385 aa13□□□□□ -0.33
FXR1-222ENST00000498658 SSH3Q8TE77 659 aa13□□□□□ -0.33
FXR1-222ENST00000498658 ZNF408Q9H9D4 720 aa13□□□□□ -0.33
FXR1-222ENST00000498658 TTF2Q9UNY4 1162 aaKnown RBP13□□□□□ -0.33
FXR1-222ENST00000498658 JAG2Q9Y219 1238 aa13□□□□□ -0.33
FXR1-222ENST00000498658 TLL2Q9Y6L7 1015 aa13□□□□□ -0.33
FXR1-222ENST00000498658 MAST3O60307 1309 aa12.99□□□□□ -0.33
FXR1-222ENST00000498658 ADM5C9JUS6 153 aa12.99□□□□□ -0.33
FXR1-222ENST00000498658 F8W031 263 aaPredicted RBP12.99□□□□□ -0.33
FXR1-222ENST00000498658 RBM5P52756 815 aaKnown RBP eCLIP12.99□□□□□ -0.33
FXR1-222ENST00000498658 FKBP1BP68106 108 aa12.99□□□□□ -0.33
FXR1-222ENST00000498658 HDLBPQ00341 1268 aaKnown RBP12.99□□□□□ -0.33
FXR1-222ENST00000498658 CHAF1AQ13111 956 aaPredicted RBP12.99□□□□□ -0.33
FXR1-222ENST00000498658 SAPCD2Q86UD0 394 aa12.99□□□□□ -0.33
FXR1-222ENST00000498658 ZBED3Q96IU2 234 aaPredicted RBP12.99□□□□□ -0.33
FXR1-222ENST00000498658 MRIQ9BWK5 157 aa12.99□□□□□ -0.33
FXR1-222ENST00000498658 DENND2AQ9ULE3 1009 aa12.99□□□□□ -0.33
FXR1-222ENST00000498658 PCNTO95613 3336 aa12.98□□□□□ -0.33
FXR1-222ENST00000498658 A0A1B0GUL7 405 aa12.98□□□□□ -0.33
FXR1-222ENST00000498658 NF2P35240 595 aa12.98□□□□□ -0.33
FXR1-222ENST00000498658 FMR1Q06787 632 aaKnown RBP eCLIP12.98□□□□□ -0.33
FXR1-222ENST00000498658 TFCP2Q12800 502 aa12.98□□□□□ -0.33
FXR1-222ENST00000498658 OS9Q13438 667 aaPredicted RBP12.98□□□□□ -0.33
FXR1-222ENST00000498658 CFAP100Q494V2 611 aa12.98□□□□□ -0.33
FXR1-222ENST00000498658 ZGPATQ8N5A5 531 aaKnown RBP12.98□□□□□ -0.33
FXR1-222ENST00000498658 IQSEC3Q9UPP2 1182 aaPredicted RBP12.98□□□□□ -0.33
FXR1-222ENST00000498658 PPP2R3BQ9Y5P8 575 aa12.98□□□□□ -0.33
FXR1-222ENST00000498658 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
FXR1-222ENST00000498658 ARAP2Q8WZ64 1704 aa12.97□□□□□ -0.33
FXR1-222ENST00000498658 ASTN2O75129 1339 aaPredicted RBP12.97□□□□□ -0.33
FXR1-222ENST00000498658 SPDYE2BA6NHP3 402 aa12.97□□□□□ -0.33
FXR1-222ENST00000498658 SURF6O75683 361 aaKnown RBP12.97□□□□□ -0.33
FXR1-222ENST00000498658 SPDYE6P0CI01 402 aa12.97□□□□□ -0.33
FXR1-222ENST00000498658 TIMM10P62072 90 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms