RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 HAND2P61296 217 aa18.03■□□□□ 0.48
CALD1-222ENST00000495522 CAMK4Q16566 473 aa18.03■□□□□ 0.48
CALD1-222ENST00000495522 CLSTN2Q9H4D0 955 aa18.03■□□□□ 0.48
CALD1-222ENST00000495522 COL22A1Q8NFW1 1626 aaPredicted RBP18.03■□□□□ 0.48
CALD1-222ENST00000495522 KAT6BQ8WYB5 2073 aa18.02■□□□□ 0.48
CALD1-222ENST00000495522 AKAP11Q9UKA4 1901 aa18.02■□□□□ 0.48
CALD1-222ENST00000495522 MYH15Q9Y2K3 1946 aa18.02■□□□□ 0.48
CALD1-222ENST00000495522 PDE8BO95263 885 aa18.02■□□□□ 0.48
CALD1-222ENST00000495522 RBM43Q6ZSC3 357 aaKnown RBP18.02■□□□□ 0.48
CALD1-222ENST00000495522 ZNF34Q8IZ26 560 aa18.02■□□□□ 0.48
CALD1-222ENST00000495522 TBC1D2BQ9UPU7 963 aa18.02■□□□□ 0.48
CALD1-222ENST00000495522 TYRO3Q06418 890 aa18.01■□□□□ 0.47
CALD1-222ENST00000495522 ATL3Q6DD88 541 aa18.01■□□□□ 0.47
CALD1-222ENST00000495522 MB21D2Q8IYB1 491 aaPredicted RBP18.01■□□□□ 0.47
CALD1-222ENST00000495522 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.01■□□□□ 0.47
CALD1-222ENST00000495522 ATRNO75882 1429 aa18.01■□□□□ 0.47
CALD1-222ENST00000495522 UBN2Q6ZU65 1347 aa18.01■□□□□ 0.47
CALD1-222ENST00000495522 ADD1P35611 737 aaKnown RBP18.01■□□□□ 0.47
CALD1-222ENST00000495522 ADD2P35612 726 aa18.01■□□□□ 0.47
CALD1-222ENST00000495522 FOSBP53539 338 aa18.01■□□□□ 0.47
CALD1-222ENST00000495522 NCOA7Q8NI08 942 aa18.01■□□□□ 0.47
CALD1-222ENST00000495522 FAM200AQ8TCP9 573 aa18.01■□□□□ 0.47
CALD1-222ENST00000495522 AK7Q96M32 723 aa18.01■□□□□ 0.47
CALD1-222ENST00000495522 DOT1LQ8TEK3 1739 aa18.01■□□□□ 0.47
CALD1-222ENST00000495522 CARMIL3Q8ND23 1372 aa18■□□□□ 0.47
CALD1-222ENST00000495522 ZNF213O14771 459 aa18■□□□□ 0.47
CALD1-222ENST00000495522 PRC1O43663 620 aa18■□□□□ 0.47
CALD1-222ENST00000495522 MRVI1Q9Y6F6 885 aa18■□□□□ 0.47
CALD1-222ENST00000495522 LRP5O75197 1615 aa18■□□□□ 0.47
CALD1-222ENST00000495522 WDR19Q8NEZ3 1342 aa18■□□□□ 0.47
CALD1-222ENST00000495522 NR1I2O75469 434 aa18■□□□□ 0.47
CALD1-222ENST00000495522 UQCRFS1P1P0C7P4 283 aa18■□□□□ 0.47
CALD1-222ENST00000495522 ARID4AP29374 1257 aaPredicted RBP18■□□□□ 0.47
CALD1-222ENST00000495522 SLC9C2Q5TAH2 1124 aa18■□□□□ 0.47
CALD1-222ENST00000495522 RALYLQ86SE5 291 aaKnown RBP18■□□□□ 0.47
CALD1-222ENST00000495522 ZNF396Q96N95 335 aaPredicted RBP18■□□□□ 0.47
CALD1-222ENST00000495522 CDCA7Q9BWT1 371 aaPredicted RBP18■□□□□ 0.47
CALD1-222ENST00000495522 RCOR1Q9UKL0 485 aa18■□□□□ 0.47
CALD1-222ENST00000495522 MROH5Q6ZUA9 1318 aa17.99■□□□□ 0.47
CALD1-222ENST00000495522 RRP9O43818 475 aaKnown RBP17.99■□□□□ 0.47
CALD1-222ENST00000495522 UBE3CQ15386 1083 aa17.99■□□□□ 0.47
CALD1-222ENST00000495522 PUM3Q15397 648 aaKnown RBP17.99■□□□□ 0.47
CALD1-222ENST00000495522 CKAP2LQ8IYA6 745 aa17.99■□□□□ 0.47
CALD1-222ENST00000495522 DHX16O60231 1041 aaKnown RBP17.98■□□□□ 0.47
CALD1-222ENST00000495522 TPM2P07951 284 aa17.98■□□□□ 0.47
CALD1-222ENST00000495522 KIAA2012Q0VF49 1180 aa17.98■□□□□ 0.47
CALD1-222ENST00000495522 CCDC102BQ68D86 513 aa17.98■□□□□ 0.47
CALD1-222ENST00000495522 PIH1D3Q9NQM4 214 aaKnown RBP17.98■□□□□ 0.47
CALD1-222ENST00000495522 GPHNQ9NQX3 736 aaPredicted RBP17.98■□□□□ 0.47
CALD1-222ENST00000495522 PHKA1P46020 1223 aa17.98■□□□□ 0.47
CALD1-222ENST00000495522 EIF5P55010 431 aaKnown RBP17.98■□□□□ 0.47
CALD1-222ENST00000495522 PLCB2Q00722 1185 aa17.98■□□□□ 0.47
CALD1-222ENST00000495522 LPIN2Q92539 896 aa17.98■□□□□ 0.47
CALD1-222ENST00000495522 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
CALD1-222ENST00000495522 KLF18A0A0U1RQI7 1052 aa17.97■□□□□ 0.47
CALD1-222ENST00000495522 ANTXR2P58335 489 aa17.97■□□□□ 0.47
CALD1-222ENST00000495522 CEBPZQ03701 1054 aaKnown RBP17.97■□□□□ 0.47
CALD1-222ENST00000495522 ARAP2Q8WZ64 1704 aa17.97■□□□□ 0.47
CALD1-222ENST00000495522 GOLGA8BA8MQT2 603 aa17.97■□□□□ 0.47
CALD1-222ENST00000495522 IDH1O75874 414 aaKnown RBP17.97■□□□□ 0.47
CALD1-222ENST00000495522 FDPSP14324 419 aaKnown RBP17.97■□□□□ 0.47
CALD1-222ENST00000495522 FGFR2P21802 821 aa17.97■□□□□ 0.47
CALD1-222ENST00000495522 TERF1P54274 439 aa17.97■□□□□ 0.47
CALD1-222ENST00000495522 SLIT2O94813 1529 aa17.96■□□□□ 0.47
CALD1-222ENST00000495522 TRDNQ13061 729 aa17.96■□□□□ 0.47
CALD1-222ENST00000495522 ANO6Q4KMQ2 910 aa17.96■□□□□ 0.47
CALD1-222ENST00000495522 SASS6Q6UVJ0 657 aa17.96■□□□□ 0.47
CALD1-222ENST00000495522 USP28Q96RU2 1077 aa17.96■□□□□ 0.47
CALD1-222ENST00000495522 CCDC87Q9NVE4 849 aa17.96■□□□□ 0.47
CALD1-222ENST00000495522 AP5Z1O43299 807 aa17.96■□□□□ 0.46
CALD1-222ENST00000495522 PPFIA3O75145 1194 aa17.96■□□□□ 0.46
CALD1-222ENST00000495522 PDE6AP16499 860 aa17.96■□□□□ 0.46
CALD1-222ENST00000495522 GUCY1B3Q02153 619 aa17.96■□□□□ 0.46
CALD1-222ENST00000495522 INTS5Q6P9B9 1019 aaKnown RBP17.96■□□□□ 0.46
CALD1-222ENST00000495522 HPS5Q9UPZ3 1129 aa17.96■□□□□ 0.46
CALD1-222ENST00000495522 ZNF532Q9HCE3 1301 aa17.95■□□□□ 0.46
CALD1-222ENST00000495522 SLC5A1P13866 664 aa17.95■□□□□ 0.46
CALD1-222ENST00000495522 DDB1Q16531 1140 aa17.95■□□□□ 0.46
CALD1-222ENST00000495522 SUSD4Q5VX71 490 aa17.95■□□□□ 0.46
CALD1-222ENST00000495522 FTOQ9C0B1 505 aaKnown RBP eCLIP17.95■□□□□ 0.462e-6■■□□□ 12.1
CALD1-222ENST00000495522 THRAP3Q9Y2W1 955 aaKnown RBP17.95■□□□□ 0.46
CALD1-222ENST00000495522 ILDR1Q86SU0 546 aaPredicted RBP17.94■□□□□ 0.46
CALD1-222ENST00000495522 CCAR1Q8IX12 1150 aaKnown RBP17.94■□□□□ 0.46
CALD1-222ENST00000495522 MPNDQ8N594 471 aa17.94■□□□□ 0.46
CALD1-222ENST00000495522 UTP14AQ9BVJ6 771 aaKnown RBP17.94■□□□□ 0.46
CALD1-222ENST00000495522 NBPF3Q9H094 633 aa17.94■□□□□ 0.46
CALD1-222ENST00000495522 CBX8Q9HC52 389 aa17.94■□□□□ 0.46
CALD1-222ENST00000495522 CPLX1O14810 134 aa17.94■□□□□ 0.46
CALD1-222ENST00000495522 CTAGE5O15320 804 aa17.94■□□□□ 0.46
CALD1-222ENST00000495522 CRKLP46109 303 aaKnown RBP17.94■□□□□ 0.46
CALD1-222ENST00000495522 SPATA31A1Q5TZJ5 1347 aa17.94■□□□□ 0.46
CALD1-222ENST00000495522 HELBQ8NG08 1087 aaPredicted RBP17.94■□□□□ 0.46
CALD1-222ENST00000495522 C8orf76Q96K31 380 aa17.94■□□□□ 0.46
CALD1-222ENST00000495522 MYO5AQ9Y4I1 1855 aaKnown RBP17.94■□□□□ 0.46
CALD1-222ENST00000495522 TCRBV5S4A2TA0A5A2 114 aa17.93■□□□□ 0.46
CALD1-222ENST00000495522 CAVIN2O95810 425 aa17.93■□□□□ 0.46
CALD1-222ENST00000495522 APPP05067 770 aa17.93■□□□□ 0.46
CALD1-222ENST00000495522 TPM3P06753 285 aa17.93■□□□□ 0.46
CALD1-222ENST00000495522 ATP6V1AP38606 617 aa17.93■□□□□ 0.46
CALD1-222ENST00000495522 PARP10Q53GL7 1025 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms