RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ILDR1Q86SU0 546 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-220ENST00000492280 AIFM3Q96NN9 605 aa14.65□□□□□ -0.06
HMGN1-220ENST00000492280 NBPF3Q9H094 633 aa14.65□□□□□ -0.06
HMGN1-220ENST00000492280 MYH3P11055 1940 aa14.65□□□□□ -0.06
HMGN1-220ENST00000492280 TBC1D10CQ8IV04 446 aa14.65□□□□□ -0.07
HMGN1-220ENST00000492280 SCAND2PQ9GZW5 306 aaPredicted RBP14.65□□□□□ -0.07
HMGN1-220ENST00000492280 GOLPH3LQ9H4A5 285 aa14.65□□□□□ -0.07
HMGN1-220ENST00000492280 LRP6O75581 1613 aa14.64□□□□□ -0.07
HMGN1-220ENST00000492280 UBE2Q2LH0YL09 131 aa14.64□□□□□ -0.07
HMGN1-220ENST00000492280 POLR3DP05423 398 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-220ENST00000492280 TRIM28Q13263 835 aaKnown RBP14.64□□□□□ -0.07
HMGN1-220ENST00000492280 CCDC102BQ68D86 513 aa14.64□□□□□ -0.07
HMGN1-220ENST00000492280 APPBP2Q92624 585 aa14.64□□□□□ -0.07
HMGN1-220ENST00000492280 MYL10Q9BUA6 226 aa14.64□□□□□ -0.07
HMGN1-220ENST00000492280 DNAJC25Q9H1X3 360 aa14.64□□□□□ -0.07
HMGN1-220ENST00000492280 CARMIL3Q8ND23 1372 aa14.64□□□□□ -0.07
HMGN1-220ENST00000492280 CCDC192P0DO97 292 aa14.64□□□□□ -0.07
HMGN1-220ENST00000492280 ADD1P35611 737 aaKnown RBP14.64□□□□□ -0.07
HMGN1-220ENST00000492280 IMMTQ16891 758 aaKnown RBP14.64□□□□□ -0.07
HMGN1-220ENST00000492280 SUSD4Q5VX71 490 aa14.64□□□□□ -0.07
HMGN1-220ENST00000492280 VSIG10Q8N0Z9 540 aa14.64□□□□□ -0.07
HMGN1-220ENST00000492280 VGLL2Q8N8G2 317 aa14.64□□□□□ -0.07
HMGN1-220ENST00000492280 DOT1LQ8TEK3 1739 aa14.64□□□□□ -0.07
HMGN1-220ENST00000492280 ELP1O95163 1332 aa14.63□□□□□ -0.07
HMGN1-220ENST00000492280 ZNF532Q9HCE3 1301 aa14.63□□□□□ -0.07
HMGN1-220ENST00000492280 OFD1O75665 1012 aa14.63□□□□□ -0.07
HMGN1-220ENST00000492280 DISP2A7MBM2 1401 aa14.63□□□□□ -0.07
HMGN1-220ENST00000492280 HMGB1P09429 215 aaKnown RBP14.63□□□□□ -0.07
HMGN1-220ENST00000492280 HS1BP3Q53T59 392 aa14.63□□□□□ -0.07
HMGN1-220ENST00000492280 PLA2G12BQ9BX93 195 aa14.63□□□□□ -0.07
HMGN1-220ENST00000492280 TEX13AQ9BXU3 409 aaPredicted RBP14.63□□□□□ -0.07
HMGN1-220ENST00000492280 PDE8BO95263 885 aa14.62□□□□□ -0.07
HMGN1-220ENST00000492280 ATP6V1AP38606 617 aa14.62□□□□□ -0.07
HMGN1-220ENST00000492280 MB21D2Q8IYB1 491 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-220ENST00000492280 SPEF2Q9C093 1822 aa14.62□□□□□ -0.07
HMGN1-220ENST00000492280 SALL1Q9NSC2 1324 aa14.62□□□□□ -0.07
HMGN1-220ENST00000492280 KCNQ2O43526 872 aa14.62□□□□□ -0.07
HMGN1-220ENST00000492280 ZNF500O60304 480 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-220ENST00000492280 RALYLQ86SE5 291 aaKnown RBP14.62□□□□□ -0.07
HMGN1-220ENST00000492280 AGXT2Q9BYV1 514 aa14.62□□□□□ -0.07
HMGN1-220ENST00000492280 CBX8Q9HC52 389 aa14.62□□□□□ -0.07
HMGN1-220ENST00000492280 HPS5Q9UPZ3 1129 aa14.62□□□□□ -0.07
HMGN1-220ENST00000492280 COL4A1P02462 1669 aa14.62□□□□□ -0.07
HMGN1-220ENST00000492280 TAF1P21675 1872 aa14.62□□□□□ -0.07
HMGN1-220ENST00000492280 B4E1Z4 1266 aa14.61□□□□□ -0.07
HMGN1-220ENST00000492280 ZNF213O14771 459 aa14.61□□□□□ -0.07
HMGN1-220ENST00000492280 LETM1O95202 739 aaPredicted RBP14.61□□□□□ -0.07
HMGN1-220ENST00000492280 CYB5R4Q7L1T6 521 aa14.61□□□□□ -0.07
HMGN1-220ENST00000492280 MYH15Q9Y2K3 1946 aa14.61□□□□□ -0.07
HMGN1-220ENST00000492280 MYH14Q7Z406 1995 aaKnown RBP14.61□□□□□ -0.07
HMGN1-220ENST00000492280 SMIM22K7EJ46 135 aa14.61□□□□□ -0.07
HMGN1-220ENST00000492280 ADD2P35612 726 aa14.61□□□□□ -0.07
HMGN1-220ENST00000492280 CRKLP46109 303 aaKnown RBP14.61□□□□□ -0.07
HMGN1-220ENST00000492280 ITPK1Q13572 414 aa14.61□□□□□ -0.07
HMGN1-220ENST00000492280 CCAR1Q8IX12 1150 aaKnown RBP14.61□□□□□ -0.07
HMGN1-220ENST00000492280 CLSTN2Q9H4D0 955 aa14.61□□□□□ -0.07
HMGN1-220ENST00000492280 ROBO1Q9Y6N7 1651 aa14.61□□□□□ -0.07
HMGN1-220ENST00000492280 CDHR2Q9BYE9 1310 aa14.61□□□□□ -0.07
HMGN1-220ENST00000492280 ANKRD36CQ5JPF3 1778 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 PRKAB2O43741 272 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 PDE8AO60658 829 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 PDE6AP16499 860 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 ME1P48163 572 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 RBM10P98175 930 aaKnown RBP14.6□□□□□ -0.07
HMGN1-220ENST00000492280 CTDSPL2Q05D32 466 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 RASGRF1Q13972 1273 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 MICU3Q86XE3 530 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 ARID3AQ99856 593 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 NEDD4P46934 1319 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 COL16A1Q07092 1604 aaPredicted RBP14.6□□□□□ -0.07
HMGN1-220ENST00000492280 KIF28PB7ZC32 967 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 C11orf57Q6ZUT1 292 aaPredicted RBP14.6□□□□□ -0.07
HMGN1-220ENST00000492280 CCDC24Q8N4L8 307 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 FAM200AQ8TCP9 573 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.6□□□□□ -0.07
HMGN1-220ENST00000492280 PHKBQ93100 1093 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 KCNF1Q9H3M0 494 aa14.6□□□□□ -0.07
HMGN1-220ENST00000492280 MCM5P33992 734 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 BCAMP50895 628 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 UVSSAQ2YD98 709 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 DNTTIP2Q5QJE6 756 aaKnown RBP14.59□□□□□ -0.07
HMGN1-220ENST00000492280 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.59□□□□□ -0.07
HMGN1-220ENST00000492280 MAGEB6Q8N7X4 407 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 MIGA1Q8NAN2 632 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 ARMT1Q9H993 441 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 CPLX1O14810 134 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 PIP4K2BP78356 416 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 DDB1Q16531 1140 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 INTS5Q6P9B9 1019 aaKnown RBP14.59□□□□□ -0.07
HMGN1-220ENST00000492280 BICDL1Q6ZP65 573 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 MARCH10Q8NA82 808 aaPredicted RBP14.59□□□□□ -0.07
HMGN1-220ENST00000492280 NCOA7Q8NI08 942 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 TSC1Q92574 1164 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 ZKSCAN3Q9BRR0 538 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 ORC3Q9UBD5 711 aaPredicted RBP14.59□□□□□ -0.07
HMGN1-220ENST00000492280 NRBP1Q9UHY1 535 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 PYCARDQ9ULZ3 195 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 CLIC4Q9Y696 253 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 TACC3Q9Y6A5 838 aa14.59□□□□□ -0.07
HMGN1-220ENST00000492280 A0A1B0GVL5 298 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms