RNA–Protein interactions for RNA: ENST00000491464.1

HDAC7-225, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-225ENST00000491464 ECM29Q5VYK3 1845 aa12.24□□□□□ -0.45
HDAC7-225ENST00000491464 VPS37DQ86XT2 251 aa12.24□□□□□ -0.45
HDAC7-225ENST00000491464 TRMT2AQ8IZ69 625 aaKnown RBP12.24□□□□□ -0.45
HDAC7-225ENST00000491464 ANKRD44Q8N8A2 993 aa12.24□□□□□ -0.45
HDAC7-225ENST00000491464 PUS3Q9BZE2 481 aaKnown RBP12.24□□□□□ -0.45
HDAC7-225ENST00000491464 TSKSQ9UJT2 592 aa12.24□□□□□ -0.45
HDAC7-225ENST00000491464 AKAP11Q9UKA4 1901 aa12.24□□□□□ -0.45
HDAC7-225ENST00000491464 SCAF8Q9UPN6 1271 aaKnown RBP12.24□□□□□ -0.45
HDAC7-225ENST00000491464 F8W031 263 aaPredicted RBP12.23□□□□□ -0.45
HDAC7-225ENST00000491464 SLC10A3P09131 477 aa12.23□□□□□ -0.45
HDAC7-225ENST00000491464 CERS5Q8N5B7 392 aa12.23□□□□□ -0.45
HDAC7-225ENST00000491464 API5Q9BZZ5 524 aaKnown RBP12.23□□□□□ -0.45
HDAC7-225ENST00000491464 USP44Q9H0E7 712 aa12.23□□□□□ -0.45
HDAC7-225ENST00000491464 HDAC5Q9UQL6 1122 aa12.23□□□□□ -0.45
HDAC7-225ENST00000491464 JAG2Q9Y219 1238 aa12.23□□□□□ -0.45
HDAC7-225ENST00000491464 RIPOR2Q9Y4F9 1068 aa12.23□□□□□ -0.45
HDAC7-225ENST00000491464 COL1A1P02452 1464 aaPredicted RBP12.22□□□□□ -0.45
HDAC7-225ENST00000491464 FAM205AQ6ZU69 1335 aa12.22□□□□□ -0.45
HDAC7-225ENST00000491464 CASP8AP2Q9UKL3 1982 aa12.22□□□□□ -0.45
HDAC7-225ENST00000491464 FAM155AB1AL88 458 aaPredicted RBP12.22□□□□□ -0.45
HDAC7-225ENST00000491464 FRAT2O75474 233 aaPredicted RBP12.22□□□□□ -0.45
HDAC7-225ENST00000491464 UBTFL1P0CB47 393 aaPredicted RBP12.22□□□□□ -0.45
HDAC7-225ENST00000491464 GYG1P46976 350 aa12.22□□□□□ -0.45
HDAC7-225ENST00000491464 RBM5P52756 815 aaKnown RBP eCLIP12.22□□□□□ -0.45
HDAC7-225ENST00000491464 KIF23Q02241 960 aaPredicted RBP12.22□□□□□ -0.45
HDAC7-225ENST00000491464 CFAP100Q494V2 611 aa12.22□□□□□ -0.45
HDAC7-225ENST00000491464 CAVIN4Q5BKX8 364 aa12.22□□□□□ -0.45
HDAC7-225ENST00000491464 PRAMEF18Q5VWM3 479 aa12.22□□□□□ -0.45
HDAC7-225ENST00000491464 REM2Q8IYK8 340 aaPredicted RBP12.22□□□□□ -0.45
HDAC7-225ENST00000491464 MTMR14Q8NCE2 650 aa12.22□□□□□ -0.45
HDAC7-225ENST00000491464 ZIC5Q96T25 663 aa12.22□□□□□ -0.45
HDAC7-225ENST00000491464 NOB1Q9ULX3 412 aaKnown RBP12.22□□□□□ -0.45
HDAC7-225ENST00000491464 KIF16BQ96L93 1317 aa12.21□□□□□ -0.45
HDAC7-225ENST00000491464 ARAP2Q8WZ64 1704 aa12.21□□□□□ -0.45
HDAC7-225ENST00000491464 LRRC24Q50LG9 513 aa12.21□□□□□ -0.45
HDAC7-225ENST00000491464 MFSD14BQ5SR56 506 aa12.21□□□□□ -0.45
HDAC7-225ENST00000491464 ARMC9Q7Z3E5 817 aa12.21□□□□□ -0.45
HDAC7-225ENST00000491464 RASAL3Q86YV0 1011 aa12.21□□□□□ -0.45
HDAC7-225ENST00000491464 TDRD7Q8NHU6 1098 aaKnown RBP12.21□□□□□ -0.45
HDAC7-225ENST00000491464 ZBED3Q96IU2 234 aaPredicted RBP12.21□□□□□ -0.45
HDAC7-225ENST00000491464 FAM84BQ96KN1 310 aaPredicted RBP12.21□□□□□ -0.45
HDAC7-225ENST00000491464 SPDYE2BA6NHP3 402 aa12.2□□□□□ -0.46
HDAC7-225ENST00000491464 UBE2Q2LH0YL09 131 aa12.2□□□□□ -0.46
HDAC7-225ENST00000491464 PDE8BO95263 885 aa12.2□□□□□ -0.46
HDAC7-225ENST00000491464 IFIT1P09914 478 aaKnown RBP12.2□□□□□ -0.46
HDAC7-225ENST00000491464 SPDYE6P0CI01 402 aa12.2□□□□□ -0.46
HDAC7-225ENST00000491464 MOB2Q70IA6 237 aa12.2□□□□□ -0.46
HDAC7-225ENST00000491464 KLHDC4Q8TBB5 520 aa12.2□□□□□ -0.46
HDAC7-225ENST00000491464 VEZTQ9HBM0 779 aa12.2□□□□□ -0.46
HDAC7-225ENST00000491464 SAGE1Q9NXZ1 904 aa12.2□□□□□ -0.46
HDAC7-225ENST00000491464 TTF2Q9UNY4 1162 aaKnown RBP12.2□□□□□ -0.46
HDAC7-225ENST00000491464 PPP2R3BQ9Y5P8 575 aa12.2□□□□□ -0.46
HDAC7-225ENST00000491464 CLRN2A0PK11 232 aa12.19□□□□□ -0.46
HDAC7-225ENST00000491464 RARSP54136 660 aaKnown RBP12.19□□□□□ -0.46
HDAC7-225ENST00000491464 CHAF1AQ13111 956 aaPredicted RBP12.19□□□□□ -0.46
HDAC7-225ENST00000491464 PRKG1Q13976 671 aa12.19□□□□□ -0.46
HDAC7-225ENST00000491464 PUM3Q15397 648 aaKnown RBP12.19□□□□□ -0.46
HDAC7-225ENST00000491464 TBC1D22AQ8WUA7 517 aa12.19□□□□□ -0.46
HDAC7-225ENST00000491464 DEFB129Q9H1M3 183 aa12.19□□□□□ -0.46
HDAC7-225ENST00000491464 MYH13Q9UKX3 1938 aa12.19□□□□□ -0.46
HDAC7-225ENST00000491464 EYA2O00167 538 aa12.18□□□□□ -0.46
HDAC7-225ENST00000491464 PPP1R12BO60237 982 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-225ENST00000491464 TRPA1O75762 1119 aa12.18□□□□□ -0.46
HDAC7-225ENST00000491464 SLC5A1P13866 664 aa12.18□□□□□ -0.46
HDAC7-225ENST00000491464 TNFAIP1Q13829 316 aa12.18□□□□□ -0.46
HDAC7-225ENST00000491464 SUPT20HL1Q3ZLR7 823 aa12.18□□□□□ -0.46
HDAC7-225ENST00000491464 FBXO33Q7Z6M2 555 aa12.18□□□□□ -0.46
HDAC7-225ENST00000491464 VGLL2Q8N8G2 317 aa12.18□□□□□ -0.46
HDAC7-225ENST00000491464 PRMT6Q96LA8 375 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-225ENST00000491464 CSRNP1Q96S65 589 aa12.18□□□□□ -0.46
HDAC7-225ENST00000491464 SERPINA10Q9UK55 444 aa12.18□□□□□ -0.46
HDAC7-225ENST00000491464 ANGEL1Q9UNK9 670 aaKnown RBP12.18□□□□□ -0.46
HDAC7-225ENST00000491464 IQSEC3Q9UPP2 1182 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-225ENST00000491464 IPO8O15397 1037 aaKnown RBP12.17□□□□□ -0.46
HDAC7-225ENST00000491464 ARHGAP45Q92619 1136 aa12.17□□□□□ -0.46
HDAC7-225ENST00000491464 ABHD8Q96I13 439 aa12.17□□□□□ -0.46
HDAC7-225ENST00000491464 RNF186Q9NXI6 227 aa12.17□□□□□ -0.46
HDAC7-225ENST00000491464 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
HDAC7-225ENST00000491464 PCDHAC2Q9Y5I4 1007 aa12.17□□□□□ -0.46
HDAC7-225ENST00000491464 MAST3O60307 1309 aa12.16□□□□□ -0.46
HDAC7-225ENST00000491464 GNAI3P08754 354 aa12.16□□□□□ -0.46
HDAC7-225ENST00000491464 CRKP46108 304 aa12.16□□□□□ -0.46
HDAC7-225ENST00000491464 RFX5P48382 616 aaPredicted RBP12.16□□□□□ -0.46
HDAC7-225ENST00000491464 BCAMP50895 628 aa12.16□□□□□ -0.46
HDAC7-225ENST00000491464 PTPN12Q05209 780 aaKnown RBP12.16□□□□□ -0.46
HDAC7-225ENST00000491464 SREBF2Q12772 1141 aa12.16□□□□□ -0.46
HDAC7-225ENST00000491464 LPIN2Q92539 896 aa12.16□□□□□ -0.46
HDAC7-225ENST00000491464 SIL1Q9H173 461 aa12.16□□□□□ -0.46
HDAC7-225ENST00000491464 CEP126Q9P2H0 1117 aa12.16□□□□□ -0.46
HDAC7-225ENST00000491464 LRRFIP2Q9Y608 721 aaKnown RBP12.16□□□□□ -0.46
HDAC7-225ENST00000491464 CIAO1O76071 339 aa12.15□□□□□ -0.46
HDAC7-225ENST00000491464 FGFR2P21802 821 aa12.15□□□□□ -0.46
HDAC7-225ENST00000491464 IREB2P48200 963 aaKnown RBP12.15□□□□□ -0.46
HDAC7-225ENST00000491464 TNNI2P48788 182 aa12.15□□□□□ -0.46
HDAC7-225ENST00000491464 MKRN3Q13064 507 aaKnown RBP12.15□□□□□ -0.46
HDAC7-225ENST00000491464 DGKZQ13574 1117 aa12.15□□□□□ -0.46
HDAC7-225ENST00000491464 RASA3Q14644 834 aa12.15□□□□□ -0.46
HDAC7-225ENST00000491464 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
HDAC7-225ENST00000491464 DIEXFQ68CQ4 756 aaKnown RBP12.15□□□□□ -0.46
HDAC7-225ENST00000491464 DZIP1LQ8IYY4 767 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms