RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 UTYO14607 1347 aa10.46□□□□□ -0.73
APP-216ENST00000491395 POLR2AP24928 1970 aaKnown RBP10.45□□□□□ -0.74
APP-216ENST00000491395 CCDC85CA6NKD9 419 aa10.45□□□□□ -0.74
APP-216ENST00000491395 NF2P35240 595 aa10.45□□□□□ -0.74
APP-216ENST00000491395 GYG1P46976 350 aa10.45□□□□□ -0.74
APP-216ENST00000491395 DGKZQ13574 1117 aa10.45□□□□□ -0.74
APP-216ENST00000491395 CFAP100Q494V2 611 aa10.45□□□□□ -0.74
APP-216ENST00000491395 APOBEC3FQ8IUX4 373 aaKnown RBP10.45□□□□□ -0.74
APP-216ENST00000491395 MTMR14Q8NCE2 650 aa10.45□□□□□ -0.74
APP-216ENST00000491395 FAM84BQ96KN1 310 aaPredicted RBP10.45□□□□□ -0.74
APP-216ENST00000491395 PRMT6Q96LA8 375 aaPredicted RBP10.45□□□□□ -0.74
APP-216ENST00000491395 SAGE1Q9NXZ1 904 aa10.45□□□□□ -0.74
APP-216ENST00000491395 RIPOR2Q9Y4F9 1068 aa10.45□□□□□ -0.74
APP-216ENST00000491395 PTPRCP08575 1304 aa10.44□□□□□ -0.74
APP-216ENST00000491395 AOX1Q06278 1338 aa10.44□□□□□ -0.74
APP-216ENST00000491395 CLRN2A0PK11 232 aa10.44□□□□□ -0.74
APP-216ENST00000491395 HIBADHP31937 336 aaKnown RBP10.44□□□□□ -0.74
APP-216ENST00000491395 PTPN12Q05209 780 aaKnown RBP10.44□□□□□ -0.74
APP-216ENST00000491395 UBE4AQ14139 1066 aa10.44□□□□□ -0.74
APP-216ENST00000491395 RABL6Q3YEC7 729 aaPredicted RBP10.44□□□□□ -0.74
APP-216ENST00000491395 LRRC24Q50LG9 513 aa10.44□□□□□ -0.74
APP-216ENST00000491395 TDRD7Q8NHU6 1098 aaKnown RBP10.44□□□□□ -0.74
APP-216ENST00000491395 USP44Q9H0E7 712 aa10.44□□□□□ -0.74
APP-216ENST00000491395 DEFB129Q9H1M3 183 aa10.44□□□□□ -0.74
APP-216ENST00000491395 FZD1Q9UP38 647 aa10.44□□□□□ -0.74
APP-216ENST00000491395 FAM205AQ6ZU69 1335 aa10.43□□□□□ -0.74
APP-216ENST00000491395 SPDYE2BA6NHP3 402 aa10.43□□□□□ -0.74
APP-216ENST00000491395 SPDYE6P0CI01 402 aa10.43□□□□□ -0.74
APP-216ENST00000491395 RBM5P52756 815 aaKnown RBP eCLIP10.43□□□□□ -0.74
APP-216ENST00000491395 FKBP1AP62942 108 aaKnown RBP10.43□□□□□ -0.74
APP-216ENST00000491395 MKRN3Q13064 507 aaKnown RBP10.43□□□□□ -0.74
APP-216ENST00000491395 LDLRAD1Q5T700 205 aa10.43□□□□□ -0.74
APP-216ENST00000491395 ARMC9Q7Z3E5 817 aa10.43□□□□□ -0.74
APP-216ENST00000491395 REM2Q8IYK8 340 aaPredicted RBP10.43□□□□□ -0.74
APP-216ENST00000491395 KLHDC4Q8TBB5 520 aa10.43□□□□□ -0.74
APP-216ENST00000491395 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.43□□□□□ -0.74
APP-216ENST00000491395 ANGEL1Q9UNK9 670 aaKnown RBP10.43□□□□□ -0.74
APP-216ENST00000491395 IQSEC3Q9UPP2 1182 aaPredicted RBP10.43□□□□□ -0.74
APP-216ENST00000491395 MYH3P11055 1940 aa10.43□□□□□ -0.74
APP-216ENST00000491395 SPEF2Q9C093 1822 aa10.42□□□□□ -0.74
APP-216ENST00000491395 MROH5Q6ZUA9 1318 aa10.42□□□□□ -0.74
APP-216ENST00000491395 TBC1D8O95759 1140 aa10.42□□□□□ -0.74
APP-216ENST00000491395 GRIK5Q16478 980 aa10.42□□□□□ -0.74
APP-216ENST00000491395 ALDH1L2Q3SY69 923 aa10.42□□□□□ -0.74
APP-216ENST00000491395 METTL24Q5JXM2 366 aa10.42□□□□□ -0.74
APP-216ENST00000491395 MFSD14BQ5SR56 506 aa10.42□□□□□ -0.74
APP-216ENST00000491395 FBXO33Q7Z6M2 555 aa10.42□□□□□ -0.74
APP-216ENST00000491395 TRMT2AQ8IZ69 625 aaKnown RBP10.42□□□□□ -0.74
APP-216ENST00000491395 VEZTQ9HBM0 779 aa10.42□□□□□ -0.74
APP-216ENST00000491395 SMC4Q9NTJ3 1288 aa10.42□□□□□ -0.74
APP-216ENST00000491395 TTF2Q9UNY4 1162 aaKnown RBP10.42□□□□□ -0.74
APP-216ENST00000491395 MYO1BO43795 1136 aa10.41□□□□□ -0.74
APP-216ENST00000491395 TM4SF4P48230 202 aa10.41□□□□□ -0.74
APP-216ENST00000491395 CHAF1AQ13111 956 aaPredicted RBP10.41□□□□□ -0.74
APP-216ENST00000491395 NBPF12Q5TAG4 269 aaPredicted RBP10.41□□□□□ -0.74
APP-216ENST00000491395 VGLL2Q8N8G2 317 aa10.41□□□□□ -0.74
APP-216ENST00000491395 PSME4Q14997 1843 aa10.41□□□□□ -0.74
APP-216ENST00000491395 PAPPA2Q9BXP8 1791 aa10.4□□□□□ -0.74
APP-216ENST00000491395 CACNA1FO60840 1977 aa10.4□□□□□ -0.74
APP-216ENST00000491395 PDE8BO95263 885 aa10.4□□□□□ -0.74
APP-216ENST00000491395 BCAMP50895 628 aa10.4□□□□□ -0.74
APP-216ENST00000491395 RASA3Q14644 834 aa10.4□□□□□ -0.74
APP-216ENST00000491395 SUPT20HL1Q3ZLR7 823 aa10.4□□□□□ -0.74
APP-216ENST00000491395 SPRYD7Q5W111 196 aa10.4□□□□□ -0.74
APP-216ENST00000491395 VPS37DQ86XT2 251 aa10.4□□□□□ -0.74
APP-216ENST00000491395 SLC10A4Q96EP9 437 aa10.4□□□□□ -0.74
APP-216ENST00000491395 CLMNQ96JQ2 1002 aa10.4□□□□□ -0.74
APP-216ENST00000491395 TDRD3Q9H7E2 651 aaKnown RBP10.4□□□□□ -0.74
APP-216ENST00000491395 ZNF70Q9UC06 446 aaPredicted RBP10.4□□□□□ -0.74
APP-216ENST00000491395 SERPINA10Q9UK55 444 aa10.4□□□□□ -0.74
APP-216ENST00000491395 NOB1Q9ULX3 412 aaKnown RBP10.4□□□□□ -0.74
APP-216ENST00000491395 PPP2R3BQ9Y5P8 575 aa10.4□□□□□ -0.74
APP-216ENST00000491395 CASP8AP2Q9UKL3 1982 aa10.39□□□□□ -0.75
APP-216ENST00000491395 FRAT2O75474 233 aaPredicted RBP10.39□□□□□ -0.75
APP-216ENST00000491395 USP2O75604 605 aaPredicted RBP10.39□□□□□ -0.75
APP-216ENST00000491395 RFX5P48382 616 aaPredicted RBP10.39□□□□□ -0.75
APP-216ENST00000491395 MAP3K11Q16584 847 aa10.39□□□□□ -0.75
APP-216ENST00000491395 SPDYE2Q495Y8 402 aa10.39□□□□□ -0.75
APP-216ENST00000491395 CAVIN4Q5BKX8 364 aa10.39□□□□□ -0.75
APP-216ENST00000491395 CTU1Q7Z7A3 348 aaKnown RBP10.39□□□□□ -0.75
APP-216ENST00000491395 DZIP1LQ8IYY4 767 aaKnown RBP10.39□□□□□ -0.75
APP-216ENST00000491395 R3HDMLQ9H3Y0 253 aa10.39□□□□□ -0.75
APP-216ENST00000491395 ZNF646O15015 1829 aaPredicted RBP10.39□□□□□ -0.75
APP-216ENST00000491395 CCER2I3L3R5 266 aa10.38□□□□□ -0.75
APP-216ENST00000491395 EYA2O00167 538 aa10.38□□□□□ -0.75
APP-216ENST00000491395 PPP1R12BO60237 982 aaPredicted RBP10.38□□□□□ -0.75
APP-216ENST00000491395 FGFR2P21802 821 aa10.38□□□□□ -0.75
APP-216ENST00000491395 CRKP46108 304 aa10.38□□□□□ -0.75
APP-216ENST00000491395 RGS19P49795 217 aa10.38□□□□□ -0.75
APP-216ENST00000491395 SREBF2Q12772 1141 aa10.38□□□□□ -0.75
APP-216ENST00000491395 PUM3Q15397 648 aaKnown RBP10.38□□□□□ -0.75
APP-216ENST00000491395 ATG9AQ7Z3C6 839 aa10.38□□□□□ -0.75
APP-216ENST00000491395 CDAN1Q8IWY9 1227 aa10.38□□□□□ -0.75
APP-216ENST00000491395 ZNF296Q8WUU4 475 aaPredicted RBP10.38□□□□□ -0.75
APP-216ENST00000491395 SSC5DA1L4H1 1573 aa10.38□□□□□ -0.75
APP-216ENST00000491395 COL1A1P02452 1464 aaPredicted RBP10.37□□□□□ -0.75
APP-216ENST00000491395 TCP10L2B9ZVM9 353 aa10.37□□□□□ -0.75
APP-216ENST00000491395 GPR25O00155 361 aa10.37□□□□□ -0.75
APP-216ENST00000491395 IFIT1P09914 478 aaKnown RBP10.37□□□□□ -0.75
APP-216ENST00000491395 CT47B1P0C2W7 299 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms