RNA–Protein interactions for RNA: ENST00000491294.1

ARPC1B-220, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 1,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-220ENST00000491294 FAM84BQ96KN1 310 aaPredicted RBP22.26■■□□□ 1.15
ARPC1B-220ENST00000491294 GYG1P46976 350 aa22.25■■□□□ 1.15
ARPC1B-220ENST00000491294 LBX1P52954 281 aa22.25■■□□□ 1.15
ARPC1B-220ENST00000491294 NOGQ13253 232 aa22.25■■□□□ 1.15
ARPC1B-220ENST00000491294 ARHGAP45Q92619 1136 aa22.25■■□□□ 1.15
ARPC1B-220ENST00000491294 HDAC5Q9UQL6 1122 aa22.25■■□□□ 1.15
ARPC1B-220ENST00000491294 UBTFL1P0CB47 393 aaPredicted RBP22.24■■□□□ 1.15
ARPC1B-220ENST00000491294 HSPA8P11142 646 aaKnown RBP22.24■■□□□ 1.15
ARPC1B-220ENST00000491294 FKBP1BP68106 108 aa22.24■■□□□ 1.15
ARPC1B-220ENST00000491294 MTMR14Q8NCE2 650 aa22.24■■□□□ 1.15
ARPC1B-220ENST00000491294 KLHDC4Q8TBB5 520 aa22.24■■□□□ 1.15
ARPC1B-220ENST00000491294 CCDC102AQ96A19 550 aa22.24■■□□□ 1.15
ARPC1B-220ENST00000491294 SCAF8Q9UPN6 1271 aaKnown RBP22.24■■□□□ 1.15
ARPC1B-220ENST00000491294 FAM205AQ6ZU69 1335 aa22.24■■□□□ 1.15
ARPC1B-220ENST00000491294 KIF16BQ96L93 1317 aa22.24■■□□□ 1.15
ARPC1B-220ENST00000491294 PDE8BO95263 885 aa22.23■■□□□ 1.15
ARPC1B-220ENST00000491294 RFX5P48382 616 aaPredicted RBP22.23■■□□□ 1.15
ARPC1B-220ENST00000491294 DLGAP5Q15398 846 aa22.23■■□□□ 1.15
ARPC1B-220ENST00000491294 VGLL2Q8N8G2 317 aa22.23■■□□□ 1.15
ARPC1B-220ENST00000491294 JAG2Q9Y219 1238 aa22.23■■□□□ 1.15
ARPC1B-220ENST00000491294 F8W031 263 aaPredicted RBP22.22■■□□□ 1.15
ARPC1B-220ENST00000491294 ZNF157P51786 506 aaPredicted RBP22.22■■□□□ 1.15
ARPC1B-220ENST00000491294 FBXO33Q7Z6M2 555 aa22.22■■□□□ 1.15
ARPC1B-220ENST00000491294 VPS37DQ86XT2 251 aa22.22■■□□□ 1.15
ARPC1B-220ENST00000491294 APOBEC3FQ8IUX4 373 aaKnown RBP22.22■■□□□ 1.15
ARPC1B-220ENST00000491294 FAM155AB1AL88 458 aaPredicted RBP22.21■■□□□ 1.15
ARPC1B-220ENST00000491294 EYA2O00167 538 aa22.21■■□□□ 1.15
ARPC1B-220ENST00000491294 CA12O43570 354 aa22.2■■□□□ 1.14
ARPC1B-220ENST00000491294 NF2P35240 595 aa22.2■■□□□ 1.14
ARPC1B-220ENST00000491294 PTPN12Q05209 780 aaKnown RBP22.2■■□□□ 1.14
ARPC1B-220ENST00000491294 CFAP100Q494V2 611 aa22.2■■□□□ 1.14
ARPC1B-220ENST00000491294 CAVIN4Q5BKX8 364 aa22.2■■□□□ 1.14
ARPC1B-220ENST00000491294 MFSD14BQ5SR56 506 aa22.2■■□□□ 1.14
ARPC1B-220ENST00000491294 PRAMEF18Q5VWM3 479 aa22.2■■□□□ 1.14
ARPC1B-220ENST00000491294 IPO8O15397 1037 aaKnown RBP22.19■■□□□ 1.14
ARPC1B-220ENST00000491294 HNRNPUQ00839 825 aaKnown RBP eCLIP22.19■■□□□ 1.14
ARPC1B-220ENST00000491294 INTS3Q68E01 1043 aaKnown RBP22.19■■□□□ 1.14
ARPC1B-220ENST00000491294 ZIC5Q96T25 663 aa22.19■■□□□ 1.14
ARPC1B-220ENST00000491294 FBXO3Q9UK99 471 aa22.19■■□□□ 1.14
ARPC1B-220ENST00000491294 MYO1BO43795 1136 aa22.18■■□□□ 1.14
ARPC1B-220ENST00000491294 PUM3Q15397 648 aaKnown RBP22.18■■□□□ 1.14
ARPC1B-220ENST00000491294 LRRFIP2Q9Y608 721 aaKnown RBP22.18■■□□□ 1.14
ARPC1B-220ENST00000491294 SPDYE2BA6NHP3 402 aa22.17■■□□□ 1.14
ARPC1B-220ENST00000491294 SLC10A3P09131 477 aa22.17■■□□□ 1.14
ARPC1B-220ENST00000491294 IFIT1P09914 478 aaKnown RBP22.17■■□□□ 1.14
ARPC1B-220ENST00000491294 SPDYE6P0CI01 402 aa22.17■■□□□ 1.14
ARPC1B-220ENST00000491294 FGFR2P21802 821 aa22.17■■□□□ 1.14
ARPC1B-220ENST00000491294 PRMT6Q96LA8 375 aaPredicted RBP22.17■■□□□ 1.14
ARPC1B-220ENST00000491294 MEIS3Q99687 375 aa22.17■■□□□ 1.14
ARPC1B-220ENST00000491294 PCDHAC2Q9Y5I4 1007 aa22.17■■□□□ 1.14
ARPC1B-220ENST00000491294 PAPPA2Q9BXP8 1791 aa22.17■■□□□ 1.14
ARPC1B-220ENST00000491294 FRAT2O75474 233 aaPredicted RBP22.16■■□□□ 1.14
ARPC1B-220ENST00000491294 BCAR3O75815 825 aa22.16■■□□□ 1.14
ARPC1B-220ENST00000491294 RBM5P52756 815 aaKnown RBP eCLIP22.16■■□□□ 1.14
ARPC1B-220ENST00000491294 KIF23Q02241 960 aaPredicted RBP22.16■■□□□ 1.14
ARPC1B-220ENST00000491294 TTLL12Q14166 644 aaPredicted RBP22.16■■□□□ 1.14
ARPC1B-220ENST00000491294 MOB2Q70IA6 237 aa22.16■■□□□ 1.14
ARPC1B-220ENST00000491294 ATG9AQ7Z3C6 839 aa22.16■■□□□ 1.14
ARPC1B-220ENST00000491294 TTF2Q9UNY4 1162 aaKnown RBP22.16■■□□□ 1.14
ARPC1B-220ENST00000491294 UBE2Q2LH0YL09 131 aa22.15■■□□□ 1.14
ARPC1B-220ENST00000491294 CIAO1O76071 339 aa22.15■■□□□ 1.14
ARPC1B-220ENST00000491294 GNAI3P08754 354 aa22.15■■□□□ 1.14
ARPC1B-220ENST00000491294 BCAMP50895 628 aa22.15■■□□□ 1.14
ARPC1B-220ENST00000491294 ATF7IPQ6VMQ6 1270 aa22.15■■□□□ 1.14
ARPC1B-220ENST00000491294 TBC1D22AQ8WUA7 517 aa22.15■■□□□ 1.14
ARPC1B-220ENST00000491294 LPIN2Q92539 896 aa22.15■■□□□ 1.14
ARPC1B-220ENST00000491294 DEFB129Q9H1M3 183 aa22.15■■□□□ 1.14
ARPC1B-220ENST00000491294 SERPINA10Q9UK55 444 aa22.15■■□□□ 1.14
ARPC1B-220ENST00000491294 IQSEC3Q9UPP2 1182 aaPredicted RBP22.15■■□□□ 1.14
ARPC1B-220ENST00000491294 PPP2R3BQ9Y5P8 575 aa22.15■■□□□ 1.14
ARPC1B-220ENST00000491294 SLC5A1P13866 664 aa22.14■■□□□ 1.13
ARPC1B-220ENST00000491294 TRIM27P14373 513 aa22.14■■□□□ 1.13
ARPC1B-220ENST00000491294 CHAF1AQ13111 956 aaPredicted RBP22.14■■□□□ 1.13
ARPC1B-220ENST00000491294 RASAL3Q86YV0 1011 aa22.14■■□□□ 1.13
ARPC1B-220ENST00000491294 FRAT1Q92837 279 aaPredicted RBP22.14■■□□□ 1.13
ARPC1B-220ENST00000491294 SIL1Q9H173 461 aa22.14■■□□□ 1.13
ARPC1B-220ENST00000491294 TSKSQ9UJT2 592 aa22.14■■□□□ 1.13
ARPC1B-220ENST00000491294 COL1A1P02452 1464 aaPredicted RBP22.14■■□□□ 1.13
ARPC1B-220ENST00000491294 CLRN2A0PK11 232 aa22.13■■□□□ 1.13
ARPC1B-220ENST00000491294 ARMC9Q7Z3E5 817 aa22.13■■□□□ 1.13
ARPC1B-220ENST00000491294 REM2Q8IYK8 340 aaPredicted RBP22.13■■□□□ 1.13
ARPC1B-220ENST00000491294 CEP126Q9P2H0 1117 aa22.13■■□□□ 1.13
ARPC1B-220ENST00000491294 IL15P40933 162 aaPredicted RBP22.12■■□□□ 1.13
ARPC1B-220ENST00000491294 VEZTQ9HBM0 779 aa22.12■■□□□ 1.13
ARPC1B-220ENST00000491294 COPRSQ9NQ92 184 aa22.12■■□□□ 1.13
ARPC1B-220ENST00000491294 CRKP46108 304 aa22.11■■□□□ 1.13
ARPC1B-220ENST00000491294 CSRNP1Q96S65 589 aa22.11■■□□□ 1.13
ARPC1B-220ENST00000491294 AOX1Q06278 1338 aa22.1■■□□□ 1.13
ARPC1B-220ENST00000491294 CAPN15O75808 1086 aa22.1■■□□□ 1.13
ARPC1B-220ENST00000491294 HDLBPQ00341 1268 aaKnown RBP22.1■■□□□ 1.13
ARPC1B-220ENST00000491294 DZIP1LQ8IYY4 767 aaKnown RBP22.1■■□□□ 1.13
ARPC1B-220ENST00000491294 SAGE1Q9NXZ1 904 aa22.1■■□□□ 1.13
ARPC1B-220ENST00000491294 PA2G4Q9UQ80 394 aaKnown RBP22.1■■□□□ 1.13
ARPC1B-220ENST00000491294 TNNQ9UQP3 1299 aa22.1■■□□□ 1.13
ARPC1B-220ENST00000491294 TNFAIP1Q13829 316 aa22.09■■□□□ 1.13
ARPC1B-220ENST00000491294 PRKG1Q13976 671 aa22.09■■□□□ 1.13
ARPC1B-220ENST00000491294 GRIK5Q16478 980 aa22.09■■□□□ 1.13
ARPC1B-220ENST00000491294 ATP2B3Q16720 1220 aa22.09■■□□□ 1.13
ARPC1B-220ENST00000491294 SUPT20HL1Q3ZLR7 823 aa22.09■■□□□ 1.13
ARPC1B-220ENST00000491294 SPDYE2Q495Y8 402 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms