RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 RIPOR2Q9Y4F9 1068 aa13.16□□□□□ -0.3
SCAMP4-208ENST00000489554 ADM5C9JUS6 153 aa13.15□□□□□ -0.3
SCAMP4-208ENST00000489554 FKBP1AP62942 108 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-208ENST00000489554 ANGEL2Q5VTE6 544 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-208ENST00000489554 PAXIP1Q6ZW49 1069 aaPredicted RBP13.15□□□□□ -0.3
SCAMP4-208ENST00000489554 CAPNS2Q96L46 248 aa13.15□□□□□ -0.3
SCAMP4-208ENST00000489554 A0A1B0GUL6 1792 aa13.15□□□□□ -0.31
SCAMP4-208ENST00000489554 MAP2K1Q02750 393 aaPredicted RBP13.14□□□□□ -0.31
SCAMP4-208ENST00000489554 METTL24Q5JXM2 366 aa13.14□□□□□ -0.31
SCAMP4-208ENST00000489554 KIAA0825Q8IV33 1275 aa13.14□□□□□ -0.31
SCAMP4-208ENST00000489554 AIDAQ96BJ3 306 aa13.14□□□□□ -0.31
SCAMP4-208ENST00000489554 ASTN2O75129 1339 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-208ENST00000489554 WNT10BO00744 389 aa13.13□□□□□ -0.31
SCAMP4-208ENST00000489554 SASH1O94885 1247 aa13.13□□□□□ -0.31
SCAMP4-208ENST00000489554 PDE8BO95263 885 aa13.13□□□□□ -0.31
SCAMP4-208ENST00000489554 HIBADHP31937 336 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-208ENST00000489554 LRRC24Q50LG9 513 aa13.13□□□□□ -0.31
SCAMP4-208ENST00000489554 CYP4F22Q6NT55 531 aa13.13□□□□□ -0.31
SCAMP4-208ENST00000489554 C2orf69Q8N8R5 385 aa13.13□□□□□ -0.31
SCAMP4-208ENST00000489554 GBA2Q9HCG7 927 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-208ENST00000489554 PCDHB15Q9Y5E8 787 aa13.13□□□□□ -0.31
SCAMP4-208ENST00000489554 ZNF646O15015 1829 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-208ENST00000489554 EYA2O00167 538 aa13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 MAP2K2P36507 400 aa13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 RFX5P48382 616 aaPredicted RBP13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 HUNKP57058 714 aa13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 NBPF9Q3BBW0 867 aa13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 DLK2Q6UY11 383 aa13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 CERS5Q8N5B7 392 aa13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 VGLL2Q8N8G2 317 aa13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 TDRD7Q8NHU6 1098 aaKnown RBP13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 KLHDC4Q8TBB5 520 aa13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 CDCA5Q96FF9 252 aa13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 FAM84BQ96KN1 310 aaPredicted RBP13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 C1orf115Q9H7X2 142 aa13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 WBP1LQ9NX94 342 aa13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 FBXO3Q9UK99 471 aa13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 FAM205AQ6ZU69 1335 aa13.12□□□□□ -0.31
SCAMP4-208ENST00000489554 THSD7BQ9C0I4 1608 aa13.11□□□□□ -0.31
SCAMP4-208ENST00000489554 GNAI3P08754 354 aa13.11□□□□□ -0.31
SCAMP4-208ENST00000489554 GYG1P46976 350 aa13.11□□□□□ -0.31
SCAMP4-208ENST00000489554 PTPN12Q05209 780 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-208ENST00000489554 GRM1Q13255 1194 aa13.11□□□□□ -0.31
SCAMP4-208ENST00000489554 PUM3Q15397 648 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-208ENST00000489554 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
SCAMP4-208ENST00000489554 VPS37DQ86XT2 251 aa13.11□□□□□ -0.31
SCAMP4-208ENST00000489554 SIRT2Q8IXJ6 389 aa13.11□□□□□ -0.31
SCAMP4-208ENST00000489554 MTMR14Q8NCE2 650 aa13.11□□□□□ -0.31
SCAMP4-208ENST00000489554 ZBED3Q96IU2 234 aaPredicted RBP13.11□□□□□ -0.31
SCAMP4-208ENST00000489554 LRRFIP2Q9Y608 721 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-208ENST00000489554 FOXN1O15353 648 aa13.1□□□□□ -0.31
SCAMP4-208ENST00000489554 CIAO1O76071 339 aa13.1□□□□□ -0.31
SCAMP4-208ENST00000489554 IFIT1P09914 478 aaKnown RBP13.1□□□□□ -0.31
SCAMP4-208ENST00000489554 CTCFP49711 727 aaPredicted RBP13.1□□□□□ -0.31
SCAMP4-208ENST00000489554 FKBP1BP68106 108 aa13.1□□□□□ -0.31
SCAMP4-208ENST00000489554 AAMPQ13685 434 aa13.1□□□□□ -0.31
SCAMP4-208ENST00000489554 DLGAP5Q15398 846 aa13.1□□□□□ -0.31
SCAMP4-208ENST00000489554 FBXO33Q7Z6M2 555 aa13.1□□□□□ -0.31
SCAMP4-208ENST00000489554 APOBEC3FQ8IUX4 373 aaKnown RBP13.1□□□□□ -0.31
SCAMP4-208ENST00000489554 PCNTO95613 3336 aa13.1□□□□□ -0.31
SCAMP4-208ENST00000489554 NOGQ13253 232 aa13.09□□□□□ -0.31
SCAMP4-208ENST00000489554 MFSD14BQ5SR56 506 aa13.09□□□□□ -0.31
SCAMP4-208ENST00000489554 COL13A1Q5TAT6 717 aaPredicted RBP13.09□□□□□ -0.31
SCAMP4-208ENST00000489554 IFFO2Q5TF58 517 aa13.09□□□□□ -0.31
SCAMP4-208ENST00000489554 RGMBQ6NW40 437 aa13.09□□□□□ -0.31
SCAMP4-208ENST00000489554 BEGAINQ9BUH8 593 aa13.09□□□□□ -0.31
SCAMP4-208ENST00000489554 JAG2Q9Y219 1238 aa13.09□□□□□ -0.31
SCAMP4-208ENST00000489554 F8W031 263 aaPredicted RBP13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 MYO1BO43795 1136 aa13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 FRAT2O75474 233 aaPredicted RBP13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 GNAI2P04899 355 aa13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 SLC5A1P13866 664 aa13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 FGFR2P21802 821 aa13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 NF2P35240 595 aa13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 CFAP100Q494V2 611 aa13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 CEP85Q6P2H3 762 aa13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 ATG9AQ7Z3C6 839 aa13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 TBC1D22AQ8WUA7 517 aa13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 LPIN2Q92539 896 aa13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 CCDC102AQ96A19 550 aa13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 PRDM10Q9NQV6 1147 aa13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 COL1A1P02452 1464 aaPredicted RBP13.08□□□□□ -0.32
SCAMP4-208ENST00000489554 POLR2AP24928 1970 aaKnown RBP13.07□□□□□ -0.32
SCAMP4-208ENST00000489554 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
SCAMP4-208ENST00000489554 AOC2O75106 756 aa13.07□□□□□ -0.32
SCAMP4-208ENST00000489554 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
SCAMP4-208ENST00000489554 IL15P40933 162 aaPredicted RBP13.07□□□□□ -0.32
SCAMP4-208ENST00000489554 MTX1Q13505 466 aa13.07□□□□□ -0.32
SCAMP4-208ENST00000489554 SIL1Q9H173 461 aa13.07□□□□□ -0.32
SCAMP4-208ENST00000489554 COPRSQ9NQ92 184 aa13.07□□□□□ -0.32
SCAMP4-208ENST00000489554 PPP4R2Q9NY27 417 aa13.07□□□□□ -0.32
SCAMP4-208ENST00000489554 CEP126Q9P2H0 1117 aa13.07□□□□□ -0.32
SCAMP4-208ENST00000489554 CA12O43570 354 aa13.06□□□□□ -0.32
SCAMP4-208ENST00000489554 IGHDP01880 384 aa13.06□□□□□ -0.32
SCAMP4-208ENST00000489554 BCAMP50895 628 aa13.06□□□□□ -0.32
SCAMP4-208ENST00000489554 ZNF157P51786 506 aaPredicted RBP13.06□□□□□ -0.32
SCAMP4-208ENST00000489554 RBM5P52756 815 aaKnown RBP eCLIP13.06□□□□□ -0.32
SCAMP4-208ENST00000489554 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
SCAMP4-208ENST00000489554 SERPINA10Q9UK55 444 aa13.06□□□□□ -0.32
SCAMP4-208ENST00000489554 TTF2Q9UNY4 1162 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms