RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 CA12O43570 354 aa24.32■■□□□ 1.48
CD55-209ENST00000488171 FKBP1AP62942 108 aaKnown RBP24.32■■□□□ 1.48
CD55-209ENST00000488171 FKBP1BP68106 108 aa24.32■■□□□ 1.48
CD55-209ENST00000488171 MROH5Q6ZUA9 1318 aa24.31■■□□□ 1.48
CD55-209ENST00000488171 SLC10A3P09131 477 aa24.31■■□□□ 1.48
CD55-209ENST00000488171 CT47B1P0C2W7 299 aaPredicted RBP24.31■■□□□ 1.48
CD55-209ENST00000488171 LRRC24Q50LG9 513 aa24.31■■□□□ 1.48
CD55-209ENST00000488171 JAG2Q9Y219 1238 aa24.31■■□□□ 1.48
CD55-209ENST00000488171 GYG1P46976 350 aa24.3■■□□□ 1.48
CD55-209ENST00000488171 MOB2Q70IA6 237 aa24.3■■□□□ 1.48
CD55-209ENST00000488171 MTMR14Q8NCE2 650 aa24.3■■□□□ 1.48
CD55-209ENST00000488171 FAM84BQ96KN1 310 aaPredicted RBP24.3■■□□□ 1.48
CD55-209ENST00000488171 KIF23Q02241 960 aaPredicted RBP24.29■■□□□ 1.48
CD55-209ENST00000488171 APOBEC3FQ8IUX4 373 aaKnown RBP24.29■■□□□ 1.48
CD55-209ENST00000488171 TDRD7Q8NHU6 1098 aaKnown RBP24.29■■□□□ 1.48
CD55-209ENST00000488171 PCDHAC2Q9Y5I4 1007 aa24.29■■□□□ 1.48
CD55-209ENST00000488171 FAM205AQ6ZU69 1335 aa24.29■■□□□ 1.48
CD55-209ENST00000488171 F8W031 263 aaPredicted RBP24.29■■□□□ 1.48
CD55-209ENST00000488171 HIBADHP31937 336 aaKnown RBP24.29■■□□□ 1.48
CD55-209ENST00000488171 DLGAP5Q15398 846 aa24.29■■□□□ 1.48
CD55-209ENST00000488171 RASAL3Q86YV0 1011 aa24.29■■□□□ 1.48
CD55-209ENST00000488171 KLHDC4Q8TBB5 520 aa24.29■■□□□ 1.48
CD55-209ENST00000488171 ECM29Q5VYK3 1845 aa24.28■■□□□ 1.48
CD55-209ENST00000488171 VGLL2Q8N8G2 317 aa24.28■■□□□ 1.48
CD55-209ENST00000488171 NOB1Q9ULX3 412 aaKnown RBP24.28■■□□□ 1.48
CD55-209ENST00000488171 UBE2Q2LH0YL09 131 aa24.27■■□□□ 1.48
CD55-209ENST00000488171 METTL24Q5JXM2 366 aa24.27■■□□□ 1.48
CD55-209ENST00000488171 CFAP100Q494V2 611 aa24.26■■□□□ 1.47
CD55-209ENST00000488171 ARAP2Q8WZ64 1704 aa24.26■■□□□ 1.47
CD55-209ENST00000488171 SPDYE2BA6NHP3 402 aa24.25■■□□□ 1.47
CD55-209ENST00000488171 PDE8BO95263 885 aa24.25■■□□□ 1.47
CD55-209ENST00000488171 SPDYE6P0CI01 402 aa24.25■■□□□ 1.47
CD55-209ENST00000488171 RFX5P48382 616 aaPredicted RBP24.25■■□□□ 1.47
CD55-209ENST00000488171 FBXO33Q7Z6M2 555 aa24.25■■□□□ 1.47
CD55-209ENST00000488171 COL1A1P02452 1464 aaPredicted RBP24.25■■□□□ 1.47
CD55-209ENST00000488171 AOX1Q06278 1338 aa24.24■■□□□ 1.47
CD55-209ENST00000488171 NF2P35240 595 aa24.24■■□□□ 1.47
CD55-209ENST00000488171 RARSP54136 660 aaKnown RBP24.24■■□□□ 1.47
CD55-209ENST00000488171 MFSD14BQ5SR56 506 aa24.24■■□□□ 1.47
CD55-209ENST00000488171 PRMT6Q96LA8 375 aaPredicted RBP24.24■■□□□ 1.47
CD55-209ENST00000488171 CSRNP1Q96S65 589 aa24.24■■□□□ 1.47
CD55-209ENST00000488171 TTLL12Q14166 644 aaPredicted RBP24.23■■□□□ 1.47
CD55-209ENST00000488171 API5Q9BZZ5 524 aaKnown RBP24.23■■□□□ 1.47
CD55-209ENST00000488171 DEFB129Q9H1M3 183 aa24.23■■□□□ 1.47
CD55-209ENST00000488171 SAGE1Q9NXZ1 904 aa24.23■■□□□ 1.47
CD55-209ENST00000488171 CLRN2A0PK11 232 aa24.21■■□□□ 1.47
CD55-209ENST00000488171 UBTFL1P0CB47 393 aaPredicted RBP24.21■■□□□ 1.47
CD55-209ENST00000488171 PTPN12Q05209 780 aaKnown RBP24.21■■□□□ 1.47
CD55-209ENST00000488171 RNF186Q9NXI6 227 aa24.21■■□□□ 1.47
CD55-209ENST00000488171 CASP8AP2Q9UKL3 1982 aa24.21■■□□□ 1.47
CD55-209ENST00000488171 AKAP11Q9UKA4 1901 aa24.2■■□□□ 1.47
CD55-209ENST00000488171 MYO1BO43795 1136 aa24.2■■□□□ 1.46
CD55-209ENST00000488171 FGFR2P21802 821 aa24.2■■□□□ 1.46
CD55-209ENST00000488171 VPS37DQ86XT2 251 aa24.2■■□□□ 1.46
CD55-209ENST00000488171 ABHD8Q96I13 439 aa24.2■■□□□ 1.46
CD55-209ENST00000488171 TTF2Q9UNY4 1162 aaKnown RBP24.2■■□□□ 1.46
CD55-209ENST00000488171 IQSEC3Q9UPP2 1182 aaPredicted RBP24.2■■□□□ 1.46
CD55-209ENST00000488171 SSC5DA1L4H1 1573 aa24.2■■□□□ 1.46
CD55-209ENST00000488171 EYA2O00167 538 aa24.19■■□□□ 1.46
CD55-209ENST00000488171 RBM5P52756 815 aaKnown RBP eCLIP24.19■■□□□ 1.46
CD55-209ENST00000488171 PRKG1Q13976 671 aa24.19■■□□□ 1.46
CD55-209ENST00000488171 CAVIN4Q5BKX8 364 aa24.19■■□□□ 1.46
CD55-209ENST00000488171 ARMC9Q7Z3E5 817 aa24.19■■□□□ 1.46
CD55-209ENST00000488171 REM2Q8IYK8 340 aaPredicted RBP24.19■■□□□ 1.46
CD55-209ENST00000488171 SERPINA10Q9UK55 444 aa24.19■■□□□ 1.46
CD55-209ENST00000488171 PPP2R3BQ9Y5P8 575 aa24.19■■□□□ 1.46
CD55-209ENST00000488171 TRPA1O75762 1119 aa24.18■■□□□ 1.46
CD55-209ENST00000488171 BCAMP50895 628 aa24.18■■□□□ 1.46
CD55-209ENST00000488171 PUM3Q15397 648 aaKnown RBP24.18■■□□□ 1.46
CD55-209ENST00000488171 GRIK5Q16478 980 aa24.18■■□□□ 1.46
CD55-209ENST00000488171 ATG9AQ7Z3C6 839 aa24.18■■□□□ 1.46
CD55-209ENST00000488171 FZD1Q9UP38 647 aa24.18■■□□□ 1.46
CD55-209ENST00000488171 LDLRAD1Q5T700 205 aa24.17■■□□□ 1.46
CD55-209ENST00000488171 VEZTQ9HBM0 779 aa24.17■■□□□ 1.46
CD55-209ENST00000488171 KIF16BQ96L93 1317 aa24.17■■□□□ 1.46
CD55-209ENST00000488171 CHAF1AQ13111 956 aaPredicted RBP24.16■■□□□ 1.46
CD55-209ENST00000488171 ARHGAP45Q92619 1136 aa24.16■■□□□ 1.46
CD55-209ENST00000488171 ANGEL1Q9UNK9 670 aaKnown RBP24.16■■□□□ 1.46
CD55-209ENST00000488171 LRRFIP2Q9Y608 721 aaKnown RBP24.16■■□□□ 1.46
CD55-209ENST00000488171 SPDYE2Q495Y8 402 aa24.16■■□□□ 1.46
CD55-209ENST00000488171 MEIS3Q99687 375 aa24.16■■□□□ 1.46
CD55-209ENST00000488171 FRAT2O75474 233 aaPredicted RBP24.15■■□□□ 1.46
CD55-209ENST00000488171 IFIT1P09914 478 aaKnown RBP24.15■■□□□ 1.46
CD55-209ENST00000488171 CRKP46108 304 aa24.15■■□□□ 1.46
CD55-209ENST00000488171 MAP3K11Q16584 847 aa24.15■■□□□ 1.46
CD55-209ENST00000488171 INTS3Q68E01 1043 aaKnown RBP24.15■■□□□ 1.46
CD55-209ENST00000488171 DZIP1LQ8IYY4 767 aaKnown RBP24.15■■□□□ 1.46
CD55-209ENST00000488171 TBC1D22AQ8WUA7 517 aa24.15■■□□□ 1.46
CD55-209ENST00000488171 TDRD3Q9H7E2 651 aaKnown RBP24.15■■□□□ 1.46
CD55-209ENST00000488171 ZNF70Q9UC06 446 aaPredicted RBP24.15■■□□□ 1.46
CD55-209ENST00000488171 MKRN3Q13064 507 aaKnown RBP24.14■■□□□ 1.45
CD55-209ENST00000488171 RASA3Q14644 834 aa24.14■■□□□ 1.45
CD55-209ENST00000488171 NBPF12Q5TAG4 269 aaPredicted RBP24.14■■□□□ 1.45
CD55-209ENST00000488171 MIER1Q8N108 512 aa24.14■■□□□ 1.45
CD55-209ENST00000488171 LPIN2Q92539 896 aa24.14■■□□□ 1.45
CD55-209ENST00000488171 MCOLN1Q9GZU1 580 aa24.14■■□□□ 1.45
CD55-209ENST00000488171 SIL1Q9H173 461 aa24.14■■□□□ 1.45
CD55-209ENST00000488171 FBXO3Q9UK99 471 aa24.14■■□□□ 1.45
CD55-209ENST00000488171 CIAO1O76071 339 aa24.13■■□□□ 1.45
CD55-209ENST00000488171 SLC5A1P13866 664 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms