RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 OGFOD1Q8N543 542 aa19.83■□□□□ 0.77
GABPA-203ENST00000487266 PA2G4Q9UQ80 394 aaKnown RBP19.83■□□□□ 0.77
GABPA-203ENST00000487266 ECM29Q5VYK3 1845 aa19.83■□□□□ 0.76
GABPA-203ENST00000487266 WNT10BO00744 389 aa19.82■□□□□ 0.76
GABPA-203ENST00000487266 IPO8O15397 1037 aaKnown RBP19.82■□□□□ 0.76
GABPA-203ENST00000487266 PDE8BO95263 885 aa19.82■□□□□ 0.76
GABPA-203ENST00000487266 HIBADHP31937 336 aaKnown RBP19.82■□□□□ 0.76
GABPA-203ENST00000487266 ATG9AQ7Z3C6 839 aa19.82■□□□□ 0.76
GABPA-203ENST00000487266 TMEM57Q8N5G2 664 aa19.82■□□□□ 0.76
GABPA-203ENST00000487266 CDCA5Q96FF9 252 aa19.82■□□□□ 0.76
GABPA-203ENST00000487266 ZKSCAN2Q63HK3 967 aa19.81■□□□□ 0.76
GABPA-203ENST00000487266 TDRD7Q8NHU6 1098 aaKnown RBP19.81■□□□□ 0.76
GABPA-203ENST00000487266 CAPNS2Q96L46 248 aa19.81■□□□□ 0.76
GABPA-203ENST00000487266 AOX1Q06278 1338 aa19.8■□□□□ 0.76
GABPA-203ENST00000487266 AOC2O75106 756 aa19.79■□□□□ 0.76
GABPA-203ENST00000487266 FGFR2P21802 821 aa19.79■□□□□ 0.76
GABPA-203ENST00000487266 BCAMP50895 628 aa19.79■□□□□ 0.76
GABPA-203ENST00000487266 PUM3Q15397 648 aaKnown RBP19.79■□□□□ 0.76
GABPA-203ENST00000487266 PRAMEF18Q5VWM3 479 aa19.79■□□□□ 0.76
GABPA-203ENST00000487266 FBXO33Q7Z6M2 555 aa19.79■□□□□ 0.76
GABPA-203ENST00000487266 ZBED3Q96IU2 234 aaPredicted RBP19.79■□□□□ 0.76
GABPA-203ENST00000487266 HDAC9Q9UKV0 1011 aa19.79■□□□□ 0.76
GABPA-203ENST00000487266 FAM205AQ6ZU69 1335 aa19.78■□□□□ 0.76
GABPA-203ENST00000487266 PITPNM2Q9BZ72 1349 aa19.78■□□□□ 0.76
GABPA-203ENST00000487266 GNAI3P08754 354 aa19.78■□□□□ 0.76
GABPA-203ENST00000487266 RLBP1P12271 317 aa19.78■□□□□ 0.76
GABPA-203ENST00000487266 HUNKP57058 714 aa19.78■□□□□ 0.76
GABPA-203ENST00000487266 CHAF1AQ13111 956 aaPredicted RBP19.78■□□□□ 0.76
GABPA-203ENST00000487266 GRIK5Q16478 980 aa19.78■□□□□ 0.76
GABPA-203ENST00000487266 MFSD14BQ5SR56 506 aa19.78■□□□□ 0.76
GABPA-203ENST00000487266 VPS37DQ86XT2 251 aa19.78■□□□□ 0.76
GABPA-203ENST00000487266 GBA2Q9HCG7 927 aaPredicted RBP19.78■□□□□ 0.76
GABPA-203ENST00000487266 COL1A1P02452 1464 aaPredicted RBP19.78■□□□□ 0.76
GABPA-203ENST00000487266 SRGAP3O43295 1099 aa19.77■□□□□ 0.76
GABPA-203ENST00000487266 PAPPA2Q9BXP8 1791 aa19.77■□□□□ 0.76
GABPA-203ENST00000487266 FOXN1O15353 648 aa19.76■□□□□ 0.75
GABPA-203ENST00000487266 CIAO1O76071 339 aa19.76■□□□□ 0.75
GABPA-203ENST00000487266 FKBP1AP62942 108 aaKnown RBP19.76■□□□□ 0.75
GABPA-203ENST00000487266 CFAP100Q494V2 611 aa19.76■□□□□ 0.75
GABPA-203ENST00000487266 CLRN2A0PK11 232 aa19.75■□□□□ 0.75
GABPA-203ENST00000487266 IFIT1P09914 478 aaKnown RBP19.75■□□□□ 0.75
GABPA-203ENST00000487266 SLC5A1P13866 664 aa19.75■□□□□ 0.75
GABPA-203ENST00000487266 ECE1P42892 770 aa19.75■□□□□ 0.75
GABPA-203ENST00000487266 DLGAP5Q15398 846 aa19.75■□□□□ 0.75
GABPA-203ENST00000487266 CAVIN4Q5BKX8 364 aa19.75■□□□□ 0.75
GABPA-203ENST00000487266 COL13A1Q5TAT6 717 aaPredicted RBP19.75■□□□□ 0.75
GABPA-203ENST00000487266 MOB2Q70IA6 237 aa19.75■□□□□ 0.75
GABPA-203ENST00000487266 C1orf115Q9H7X2 142 aa19.75■□□□□ 0.75
GABPA-203ENST00000487266 COPRSQ9NQ92 184 aa19.75■□□□□ 0.75
GABPA-203ENST00000487266 PNMA6EA0A0J9YXQ4 647 aa19.74■□□□□ 0.75
GABPA-203ENST00000487266 SPDYE2BA6NHP3 402 aa19.74■□□□□ 0.75
GABPA-203ENST00000487266 GNAI2P04899 355 aa19.74■□□□□ 0.75
GABPA-203ENST00000487266 SPDYE6P0CI01 402 aa19.74■□□□□ 0.75
GABPA-203ENST00000487266 MTX1Q13505 466 aa19.74■□□□□ 0.75
GABPA-203ENST00000487266 ATP2B3Q16720 1220 aa19.74■□□□□ 0.75
GABPA-203ENST00000487266 FTSJ3Q8IY81 847 aaKnown RBP19.74■□□□□ 0.75
GABPA-203ENST00000487266 C2orf69Q8N8R5 385 aa19.74■□□□□ 0.75
GABPA-203ENST00000487266 LPIN2Q92539 896 aa19.74■□□□□ 0.75
GABPA-203ENST00000487266 ZIC5Q96T25 663 aa19.74■□□□□ 0.75
GABPA-203ENST00000487266 TTF2Q9UNY4 1162 aaKnown RBP19.74■□□□□ 0.75
GABPA-203ENST00000487266 HDAC5Q9UQL6 1122 aa19.74■□□□□ 0.75
GABPA-203ENST00000487266 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.74■□□□□ 0.75
GABPA-203ENST00000487266 FRAT2O75474 233 aaPredicted RBP19.73■□□□□ 0.75
GABPA-203ENST00000487266 ADORA1P30542 326 aa19.73■□□□□ 0.75
GABPA-203ENST00000487266 IL15P40933 162 aaPredicted RBP19.73■□□□□ 0.75
GABPA-203ENST00000487266 RBM5P52756 815 aaKnown RBP eCLIP19.73■□□□□ 0.75
GABPA-203ENST00000487266 ITPRIPQ8IWB1 547 aa19.73■□□□□ 0.75
GABPA-203ENST00000487266 HHIPL1Q96JK4 782 aa19.73■□□□□ 0.75
GABPA-203ENST00000487266 PRMT6Q96LA8 375 aaPredicted RBP19.73■□□□□ 0.75
GABPA-203ENST00000487266 WBP1LQ9NX94 342 aa19.73■□□□□ 0.75
GABPA-203ENST00000487266 CEP126Q9P2H0 1117 aa19.73■□□□□ 0.75
GABPA-203ENST00000487266 MMP14P50281 582 aa19.72■□□□□ 0.75
GABPA-203ENST00000487266 APOBEC3FQ8IUX4 373 aaKnown RBP19.72■□□□□ 0.75
GABPA-203ENST00000487266 DZIP1LQ8IYY4 767 aaKnown RBP19.72■□□□□ 0.75
GABPA-203ENST00000487266 MTMR14Q8NCE2 650 aa19.72■□□□□ 0.75
GABPA-203ENST00000487266 FBXO3Q9UK99 471 aa19.72■□□□□ 0.75
GABPA-203ENST00000487266 SSC5DA1L4H1 1573 aa19.71■□□□□ 0.75
GABPA-203ENST00000487266 RGMBQ6NW40 437 aa19.71■□□□□ 0.75
GABPA-203ENST00000487266 PANK1Q8TE04 598 aa19.71■□□□□ 0.75
GABPA-203ENST00000487266 VEZTQ9HBM0 779 aa19.71■□□□□ 0.75
GABPA-203ENST00000487266 FZD1Q9UP38 647 aa19.71■□□□□ 0.75
GABPA-203ENST00000487266 FAM155AB1AL88 458 aaPredicted RBP19.7■□□□□ 0.74
GABPA-203ENST00000487266 AIDAQ96BJ3 306 aa19.7■□□□□ 0.74
GABPA-203ENST00000487266 PHKA1P46020 1223 aa19.69■□□□□ 0.74
GABPA-203ENST00000487266 ZNF157P51786 506 aaPredicted RBP19.69■□□□□ 0.74
GABPA-203ENST00000487266 TFCP2Q12800 502 aa19.69■□□□□ 0.74
GABPA-203ENST00000487266 PRKG1Q13976 671 aa19.69■□□□□ 0.74
GABPA-203ENST00000487266 TSKSQ9UJT2 592 aa19.69■□□□□ 0.74
GABPA-203ENST00000487266 CRKP46108 304 aa19.68■□□□□ 0.74
GABPA-203ENST00000487266 MAP2K1Q02750 393 aaPredicted RBP19.68■□□□□ 0.74
GABPA-203ENST00000487266 TTLL12Q14166 644 aaPredicted RBP19.68■□□□□ 0.74
GABPA-203ENST00000487266 DEFB129Q9H1M3 183 aa19.68■□□□□ 0.74
GABPA-203ENST00000487266 SERPINA10Q9UK55 444 aa19.68■□□□□ 0.74
GABPA-203ENST00000487266 UBE2Q2LH0YL09 131 aa19.67■□□□□ 0.74
GABPA-203ENST00000487266 MYO1BO43795 1136 aa19.67■□□□□ 0.74
GABPA-203ENST00000487266 MAP2K2P36507 400 aa19.67■□□□□ 0.74
GABPA-203ENST00000487266 TIMM10P62072 90 aa19.67■□□□□ 0.74
GABPA-203ENST00000487266 TBC1D22AQ8WUA7 517 aa19.67■□□□□ 0.74
GABPA-203ENST00000487266 TDRD3Q9H7E2 651 aaKnown RBP19.67■□□□□ 0.74
GABPA-203ENST00000487266 A0A1B0GUL7 405 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms