RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 TP53INP1Q96A56 240 aa8.65□□□□□ -1.02
SMARCC1-207ENST00000485833 MEGF10Q96KG7 1140 aa8.65□□□□□ -1.02
SMARCC1-207ENST00000485833 LIN7BQ9HAP6 207 aa8.65□□□□□ -1.02
SMARCC1-207ENST00000485833 NPHS2Q9NP85 383 aa8.65□□□□□ -1.02
SMARCC1-207ENST00000485833 METTL12A8MUP2 240 aa8.64□□□□□ -1.03
SMARCC1-207ENST00000485833 DYRK3O43781 588 aa8.64□□□□□ -1.03
SMARCC1-207ENST00000485833 ADAM11O75078 769 aa8.64□□□□□ -1.03
SMARCC1-207ENST00000485833 ALX3O95076 343 aa8.64□□□□□ -1.03
SMARCC1-207ENST00000485833 ARL4DP49703 201 aa8.64□□□□□ -1.03
SMARCC1-207ENST00000485833 IKBKEQ14164 716 aa8.64□□□□□ -1.03
SMARCC1-207ENST00000485833 Q6ZS46 218 aa8.64□□□□□ -1.03
SMARCC1-207ENST00000485833 ACAD11Q709F0 780 aa8.64□□□□□ -1.03
SMARCC1-207ENST00000485833 AGGF1Q8N302 714 aaeCLIP8.64□□□□□ -1.03
SMARCC1-207ENST00000485833 FOXD4L4Q8WXT5 416 aaPredicted RBP8.64□□□□□ -1.03
SMARCC1-207ENST00000485833 CSRNP1Q96S65 589 aa8.64□□□□□ -1.03
SMARCC1-207ENST00000485833 TCF12Q99081 682 aa8.64□□□□□ -1.03
SMARCC1-207ENST00000485833 SEMA6BQ9H3T3 888 aa8.64□□□□□ -1.03
SMARCC1-207ENST00000485833 DDX3YO15523 660 aaKnown RBP8.63□□□□□ -1.03
SMARCC1-207ENST00000485833 H2AFB1P0C5Y9 115 aa8.63□□□□□ -1.03
SMARCC1-207ENST00000485833 H2AFB2P0C5Z0 115 aa8.63□□□□□ -1.03
SMARCC1-207ENST00000485833 C19orf57Q0VDD7 668 aa8.63□□□□□ -1.03
SMARCC1-207ENST00000485833 CCDC74AQ96AQ1 378 aa8.63□□□□□ -1.03
SMARCC1-207ENST00000485833 SOX1O00570 391 aaPredicted RBP8.62□□□□□ -1.03
SMARCC1-207ENST00000485833 DUOXA2Q1HG44 320 aa8.62□□□□□ -1.03
SMARCC1-207ENST00000485833 DZIP1LQ8IYY4 767 aaKnown RBP8.62□□□□□ -1.03
SMARCC1-207ENST00000485833 UBASH3BQ8TF42 649 aa8.62□□□□□ -1.03
SMARCC1-207ENST00000485833 EHD4Q9H223 541 aa8.62□□□□□ -1.03
SMARCC1-207ENST00000485833 A0A096LPE4 126 aa8.61□□□□□ -1.03
SMARCC1-207ENST00000485833 A0A1W2PPZ6 126 aa8.61□□□□□ -1.03
SMARCC1-207ENST00000485833 ESRRAP11474 423 aaPredicted RBP8.61□□□□□ -1.03
SMARCC1-207ENST00000485833 GLB1P16278 677 aa8.61□□□□□ -1.03
SMARCC1-207ENST00000485833 GRIA4P48058 902 aa8.61□□□□□ -1.03
SMARCC1-207ENST00000485833 NLRP12P59046 1061 aa8.61□□□□□ -1.03
SMARCC1-207ENST00000485833 HGSNATQ68CP4 663 aa8.61□□□□□ -1.03
SMARCC1-207ENST00000485833 KIAA1211Q6ZU35 1233 aa8.61□□□□□ -1.03
SMARCC1-207ENST00000485833 SOX17Q9H6I2 414 aaPredicted RBP8.61□□□□□ -1.03
SMARCC1-207ENST00000485833 TREHO43280 583 aa8.6□□□□□ -1.03
SMARCC1-207ENST00000485833 PDIA4P13667 645 aaKnown RBP8.6□□□□□ -1.03
SMARCC1-207ENST00000485833 ITGB7P26010 798 aa8.6□□□□□ -1.03
SMARCC1-207ENST00000485833 DSC3Q14574 896 aa8.6□□□□□ -1.03
SMARCC1-207ENST00000485833 SPRED3Q2MJR0 410 aa8.59□□□□□ -1.03
SMARCC1-207ENST00000485833 CEP41Q9BYV8 373 aa8.59□□□□□ -1.03
SMARCC1-207ENST00000485833 CLEC4MQ9H2X3 399 aaPredicted RBP8.59□□□□□ -1.03
SMARCC1-207ENST00000485833 GADD45BO75293 160 aaPredicted RBP8.58□□□□□ -1.04
SMARCC1-207ENST00000485833 PCDH1Q08174 1060 aa8.58□□□□□ -1.04
SMARCC1-207ENST00000485833 PRPF40BQ6NWY9 871 aaKnown RBP8.58□□□□□ -1.04
SMARCC1-207ENST00000485833 ZSCAN29Q8IWY8 852 aaPredicted RBP8.58□□□□□ -1.04
SMARCC1-207ENST00000485833 ASB16Q96NS5 453 aa8.58□□□□□ -1.04
SMARCC1-207ENST00000485833 PNMA6FA0A0J9YX94 578 aa8.57□□□□□ -1.04
SMARCC1-207ENST00000485833 ITPKAP23677 461 aa8.57□□□□□ -1.04
SMARCC1-207ENST00000485833 PLCB3Q01970 1234 aa8.57□□□□□ -1.04
SMARCC1-207ENST00000485833 EPS8L3Q8TE67 593 aaKnown RBP8.57□□□□□ -1.04
SMARCC1-207ENST00000485833 RNF208Q9H0X6 261 aa8.57□□□□□ -1.04
SMARCC1-207ENST00000485833 ZNF576Q9H609 170 aa8.57□□□□□ -1.04
SMARCC1-207ENST00000485833 ABCB6Q9NP58 842 aa8.57□□□□□ -1.04
SMARCC1-207ENST00000485833 TRAK1Q9UPV9 953 aa8.57□□□□□ -1.04
SMARCC1-207ENST00000485833 EIF4EBP3O60516 100 aaPredicted RBP8.56□□□□□ -1.04
SMARCC1-207ENST00000485833 GSTM4Q03013 218 aa8.56□□□□□ -1.04
SMARCC1-207ENST00000485833 GRM2Q14416 872 aa8.56□□□□□ -1.04
SMARCC1-207ENST00000485833 ENOX2Q16206 610 aaKnown RBP8.56□□□□□ -1.04
SMARCC1-207ENST00000485833 AEBP1Q8IUX7 1158 aa8.56□□□□□ -1.04
SMARCC1-207ENST00000485833 UBL7Q96S82 380 aaPredicted RBP8.56□□□□□ -1.04
SMARCC1-207ENST00000485833 RUSC1Q9BVN2 902 aa8.56□□□□□ -1.04
SMARCC1-207ENST00000485833 USP26Q9BXU7 913 aa8.56□□□□□ -1.04
SMARCC1-207ENST00000485833 PTPN12Q05209 780 aaKnown RBP8.55□□□□□ -1.04
SMARCC1-207ENST00000485833 FMR1Q06787 632 aaKnown RBP eCLIP8.55□□□□□ -1.046e-7■■■■□ 24.7
SMARCC1-207ENST00000485833 ZNF423Q2M1K9 1284 aa8.55□□□□□ -1.04
SMARCC1-207ENST00000485833 UVSSAQ2YD98 709 aa8.55□□□□□ -1.04
SMARCC1-207ENST00000485833 PRSS36Q5K4E3 855 aa8.55□□□□□ -1.04
SMARCC1-207ENST00000485833 PRR23CQ6ZRP0 262 aa8.55□□□□□ -1.04
SMARCC1-207ENST00000485833 GLIS3Q8NEA6 775 aa8.55□□□□□ -1.04
SMARCC1-207ENST00000485833 NLRP2Q9NX02 1062 aa8.55□□□□□ -1.04
SMARCC1-207ENST00000485833 LOC100289279A0A1B0GTE1 492 aa8.54□□□□□ -1.04
SMARCC1-207ENST00000485833 B3GALT4O96024 378 aa8.54□□□□□ -1.04
SMARCC1-207ENST00000485833 ANKRD34AQ69YU3 496 aa8.54□□□□□ -1.04
SMARCC1-207ENST00000485833 PI16Q6UXB8 463 aa8.54□□□□□ -1.04
SMARCC1-207ENST00000485833 NRSN2Q9GZP1 204 aa8.54□□□□□ -1.04
SMARCC1-207ENST00000485833 TMEM238LA0A1B0GVL6 79 aa8.53□□□□□ -1.04
SMARCC1-207ENST00000485833 MEGF11A6BM72 1044 aa8.53□□□□□ -1.04
SMARCC1-207ENST00000485833 ARMC10Q8N2F6 343 aa8.53□□□□□ -1.04
SMARCC1-207ENST00000485833 FAM46AQ96IP4 442 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-207ENST00000485833 MAPK8P45983 427 aa8.52□□□□□ -1.05
SMARCC1-207ENST00000485833 FDX2Q6P4F2 183 aa8.52□□□□□ -1.05
SMARCC1-207ENST00000485833 SND1Q7KZF4 910 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMARCC1-207ENST00000485833 UTP4Q969X6 686 aaKnown RBP8.52□□□□□ -1.05
SMARCC1-207ENST00000485833 TMPRSS13Q9BYE2 586 aa8.52□□□□□ -1.05
SMARCC1-207ENST00000485833 DHX15O43143 795 aaKnown RBP8.51□□□□□ -1.05
SMARCC1-207ENST00000485833 PREPP48147 710 aa8.51□□□□□ -1.05
SMARCC1-207ENST00000485833 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.51□□□□□ -1.05
SMARCC1-207ENST00000485833 RPS26P11Q5JNZ5 115 aaPredicted RBP8.51□□□□□ -1.05
SMARCC1-207ENST00000485833 DDX54Q8TDD1 881 aaKnown RBP8.51□□□□□ -1.05
SMARCC1-207ENST00000485833 FBF1Q8TES7 1133 aa8.51□□□□□ -1.05
SMARCC1-207ENST00000485833 BCO2Q9BYV7 579 aa8.51□□□□□ -1.05
SMARCC1-207ENST00000485833 SART1O43290 800 aaKnown RBP8.5□□□□□ -1.05
SMARCC1-207ENST00000485833 DLGAP3O95886 979 aa8.5□□□□□ -1.05
SMARCC1-207ENST00000485833 CYP11A1P05108 521 aa8.5□□□□□ -1.05
SMARCC1-207ENST00000485833 FCGRTP55899 365 aa8.5□□□□□ -1.05
SMARCC1-207ENST00000485833 NUTM2GQ5VZR2 741 aa8.5□□□□□ -1.05
SMARCC1-207ENST00000485833 DTHD1Q6ZMT9 781 aa8.5□□□□□ -1.05
SMARCC1-207ENST00000485833 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms