RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 NF2P35240 595 aa11.87□□□□□ -0.51
NUP50-215ENST00000484186 DLGAP5Q15398 846 aa11.87□□□□□ -0.51
NUP50-215ENST00000484186 APOBEC3FQ8IUX4 373 aaKnown RBP11.87□□□□□ -0.51
NUP50-215ENST00000484186 MTMR14Q8NCE2 650 aa11.87□□□□□ -0.51
NUP50-215ENST00000484186 USP44Q9H0E7 712 aa11.87□□□□□ -0.51
NUP50-215ENST00000484186 MROH5Q6ZUA9 1318 aa11.86□□□□□ -0.51
NUP50-215ENST00000484186 F8W031 263 aaPredicted RBP11.86□□□□□ -0.51
NUP50-215ENST00000484186 UBE2Q2LH0YL09 131 aa11.86□□□□□ -0.51
NUP50-215ENST00000484186 HIBADHP31937 336 aaKnown RBP11.86□□□□□ -0.51
NUP50-215ENST00000484186 TTLL12Q14166 644 aaPredicted RBP11.86□□□□□ -0.51
NUP50-215ENST00000484186 MOB2Q70IA6 237 aa11.86□□□□□ -0.51
NUP50-215ENST00000484186 RASAL3Q86YV0 1011 aa11.86□□□□□ -0.51
NUP50-215ENST00000484186 REM2Q8IYK8 340 aaPredicted RBP11.86□□□□□ -0.51
NUP50-215ENST00000484186 ANKRD44Q8N8A2 993 aa11.86□□□□□ -0.51
NUP50-215ENST00000484186 TDRD7Q8NHU6 1098 aaKnown RBP11.86□□□□□ -0.51
NUP50-215ENST00000484186 FAM84BQ96KN1 310 aaPredicted RBP11.86□□□□□ -0.51
NUP50-215ENST00000484186 CSRNP1Q96S65 589 aa11.86□□□□□ -0.51
NUP50-215ENST00000484186 SMC4Q9NTJ3 1288 aa11.86□□□□□ -0.51
NUP50-215ENST00000484186 FAM205AQ6ZU69 1335 aa11.86□□□□□ -0.51
NUP50-215ENST00000484186 CT47B1P0C2W7 299 aaPredicted RBP11.85□□□□□ -0.51
NUP50-215ENST00000484186 GYG1P46976 350 aa11.85□□□□□ -0.51
NUP50-215ENST00000484186 CFAP100Q494V2 611 aa11.85□□□□□ -0.51
NUP50-215ENST00000484186 LRRC24Q50LG9 513 aa11.85□□□□□ -0.51
NUP50-215ENST00000484186 ABHD8Q96I13 439 aa11.85□□□□□ -0.51
NUP50-215ENST00000484186 RNF186Q9NXI6 227 aa11.85□□□□□ -0.51
NUP50-215ENST00000484186 SAGE1Q9NXZ1 904 aa11.85□□□□□ -0.51
NUP50-215ENST00000484186 JAG2Q9Y219 1238 aa11.85□□□□□ -0.51
NUP50-215ENST00000484186 A0A1B0GUL6 1792 aa11.84□□□□□ -0.51
NUP50-215ENST00000484186 PAPPA2Q9BXP8 1791 aa11.84□□□□□ -0.51
NUP50-215ENST00000484186 TRPA1O75762 1119 aa11.84□□□□□ -0.51
NUP50-215ENST00000484186 METTL24Q5JXM2 366 aa11.84□□□□□ -0.51
NUP50-215ENST00000484186 ARMC9Q7Z3E5 817 aa11.84□□□□□ -0.51
NUP50-215ENST00000484186 PRMT6Q96LA8 375 aaPredicted RBP11.84□□□□□ -0.51
NUP50-215ENST00000484186 DEFB129Q9H1M3 183 aa11.84□□□□□ -0.51
NUP50-215ENST00000484186 PCDHAC2Q9Y5I4 1007 aa11.84□□□□□ -0.51
NUP50-215ENST00000484186 SPDYE2BA6NHP3 402 aa11.83□□□□□ -0.52
NUP50-215ENST00000484186 MYO1BO43795 1136 aa11.83□□□□□ -0.52
NUP50-215ENST00000484186 PDE8BO95263 885 aa11.83□□□□□ -0.52
NUP50-215ENST00000484186 SPDYE6P0CI01 402 aa11.83□□□□□ -0.52
NUP50-215ENST00000484186 RBM5P52756 815 aaKnown RBP eCLIP11.83□□□□□ -0.52
NUP50-215ENST00000484186 PRKG1Q13976 671 aa11.83□□□□□ -0.52
NUP50-215ENST00000484186 MFSD14BQ5SR56 506 aa11.83□□□□□ -0.52
NUP50-215ENST00000484186 FBXO33Q7Z6M2 555 aa11.83□□□□□ -0.52
NUP50-215ENST00000484186 VPS37DQ86XT2 251 aa11.83□□□□□ -0.52
NUP50-215ENST00000484186 KLHDC4Q8TBB5 520 aa11.83□□□□□ -0.52
NUP50-215ENST00000484186 NOB1Q9ULX3 412 aaKnown RBP11.83□□□□□ -0.52
NUP50-215ENST00000484186 PPP2R3BQ9Y5P8 575 aa11.83□□□□□ -0.52
NUP50-215ENST00000484186 CLRN2A0PK11 232 aa11.82□□□□□ -0.52
NUP50-215ENST00000484186 PTPN12Q05209 780 aaKnown RBP11.82□□□□□ -0.52
NUP50-215ENST00000484186 CAVIN4Q5BKX8 364 aa11.82□□□□□ -0.52
NUP50-215ENST00000484186 VGLL2Q8N8G2 317 aa11.82□□□□□ -0.52
NUP50-215ENST00000484186 SERPINA10Q9UK55 444 aa11.82□□□□□ -0.52
NUP50-215ENST00000484186 COL1A1P02452 1464 aaPredicted RBP11.82□□□□□ -0.52
NUP50-215ENST00000484186 FRAT2O75474 233 aaPredicted RBP11.81□□□□□ -0.52
NUP50-215ENST00000484186 TM4SF4P48230 202 aa11.81□□□□□ -0.52
NUP50-215ENST00000484186 RFX5P48382 616 aaPredicted RBP11.81□□□□□ -0.52
NUP50-215ENST00000484186 DGKZQ13574 1117 aa11.81□□□□□ -0.52
NUP50-215ENST00000484186 LDLRAD1Q5T700 205 aa11.81□□□□□ -0.52
NUP50-215ENST00000484186 API5Q9BZZ5 524 aaKnown RBP11.81□□□□□ -0.52
NUP50-215ENST00000484186 MCOLN1Q9GZU1 580 aa11.81□□□□□ -0.52
NUP50-215ENST00000484186 VEZTQ9HBM0 779 aa11.81□□□□□ -0.52
NUP50-215ENST00000484186 ANGEL1Q9UNK9 670 aaKnown RBP11.81□□□□□ -0.52
NUP50-215ENST00000484186 TTF2Q9UNY4 1162 aaKnown RBP11.81□□□□□ -0.52
NUP50-215ENST00000484186 IQSEC3Q9UPP2 1182 aaPredicted RBP11.81□□□□□ -0.52
NUP50-215ENST00000484186 CASP8AP2Q9UKL3 1982 aa11.81□□□□□ -0.52
NUP50-215ENST00000484186 EYA2O00167 538 aa11.8□□□□□ -0.52
NUP50-215ENST00000484186 PPP1R12BO60237 982 aaPredicted RBP11.8□□□□□ -0.52
NUP50-215ENST00000484186 IFIT1P09914 478 aaKnown RBP11.8□□□□□ -0.52
NUP50-215ENST00000484186 UBTFL1P0CB47 393 aaPredicted RBP11.8□□□□□ -0.52
NUP50-215ENST00000484186 FGFR2P21802 821 aa11.8□□□□□ -0.52
NUP50-215ENST00000484186 BCAMP50895 628 aa11.8□□□□□ -0.52
NUP50-215ENST00000484186 RARSP54136 660 aaKnown RBP11.8□□□□□ -0.52
NUP50-215ENST00000484186 MAP3K11Q16584 847 aa11.8□□□□□ -0.52
NUP50-215ENST00000484186 SUPT20HL1Q3ZLR7 823 aa11.8□□□□□ -0.52
NUP50-215ENST00000484186 TBC1D22AQ8WUA7 517 aa11.8□□□□□ -0.52
NUP50-215ENST00000484186 HDAC5Q9UQL6 1122 aa11.8□□□□□ -0.52
NUP50-215ENST00000484186 AOX1Q06278 1338 aa11.8□□□□□ -0.52
NUP50-215ENST00000484186 CCDC85CA6NKD9 419 aa11.79□□□□□ -0.52
NUP50-215ENST00000484186 CRKP46108 304 aa11.79□□□□□ -0.52
NUP50-215ENST00000484186 MKRN3Q13064 507 aaKnown RBP11.79□□□□□ -0.52
NUP50-215ENST00000484186 CHAF1AQ13111 956 aaPredicted RBP11.79□□□□□ -0.52
NUP50-215ENST00000484186 RASA3Q14644 834 aa11.79□□□□□ -0.52
NUP50-215ENST00000484186 PUM3Q15397 648 aaKnown RBP11.79□□□□□ -0.52
NUP50-215ENST00000484186 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
NUP50-215ENST00000484186 NBPF12Q5TAG4 269 aaPredicted RBP11.79□□□□□ -0.52
NUP50-215ENST00000484186 DZIP1LQ8IYY4 767 aaKnown RBP11.79□□□□□ -0.52
NUP50-215ENST00000484186 SLC10A4Q96EP9 437 aa11.79□□□□□ -0.52
NUP50-215ENST00000484186 TDRD3Q9H7E2 651 aaKnown RBP11.79□□□□□ -0.52
NUP50-215ENST00000484186 ZNF70Q9UC06 446 aaPredicted RBP11.79□□□□□ -0.52
NUP50-215ENST00000484186 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
NUP50-215ENST00000484186 FZD1Q9UP38 647 aa11.79□□□□□ -0.52
NUP50-215ENST00000484186 KIF16BQ96L93 1317 aa11.79□□□□□ -0.52
NUP50-215ENST00000484186 AKAP11Q9UKA4 1901 aa11.78□□□□□ -0.52
NUP50-215ENST00000484186 UNCXA6NJT0 531 aa11.78□□□□□ -0.52
NUP50-215ENST00000484186 SLC5A1P13866 664 aa11.78□□□□□ -0.52
NUP50-215ENST00000484186 HDLBPQ00341 1268 aaKnown RBP11.78□□□□□ -0.52
NUP50-215ENST00000484186 SREBF2Q12772 1141 aa11.78□□□□□ -0.52
NUP50-215ENST00000484186 TNFAIP1Q13829 316 aa11.78□□□□□ -0.52
NUP50-215ENST00000484186 GRIK5Q16478 980 aa11.78□□□□□ -0.52
NUP50-215ENST00000484186 SPRYD7Q5W111 196 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms