RNA–Protein interactions for RNA: ENST00000481932.1

SH3YL1-223, Transcript of SH3 and SYLF domain containing 1, human

TSL 3

Gene SH3YL1, Length 885 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-223	ENST00000481932	ADAMTS8	Q9UP79	889 aa		10.22	□□□□□ -0.77
SH3YL1-223	ENST00000481932	RCCD1	A6NED2	376 aa		10.21	□□□□□ -0.77
SH3YL1-223	ENST00000481932	FOXN1	O15353	648 aa		10.21	□□□□□ -0.77
SH3YL1-223	ENST00000481932	FECH	P22830	423 aa		10.21	□□□□□ -0.77
SH3YL1-223	ENST00000481932	DUSP27	Q5VZP5	1158 aa		10.21	□□□□□ -0.77
SH3YL1-223	ENST00000481932	SP8	Q8IXZ3	490 aa		10.21	□□□□□ -0.77
SH3YL1-223	ENST00000481932	MPND	Q8N594	471 aa		10.21	□□□□□ -0.77
SH3YL1-223	ENST00000481932	AIDA	Q96BJ3	306 aa		10.21	□□□□□ -0.77
SH3YL1-223	ENST00000481932	ISCA1	Q9BUE6	129 aa		10.21	□□□□□ -0.77
SH3YL1-223	ENST00000481932	ADARB2	Q9NS39	739 aa	Known RBP	10.21	□□□□□ -0.77
SH3YL1-223	ENST00000481932	HYPK	Q9NX55	129 aa		10.21	□□□□□ -0.77
SH3YL1-223	ENST00000481932	ZNRF3	Q9ULT6	936 aa		10.21	□□□□□ -0.77
SH3YL1-223	ENST00000481932	ABT1	Q9ULW3	272 aa	Known RBP	10.21	□□□□□ -0.77
SH3YL1-223	ENST00000481932	GTF3C3	Q9Y5Q9	886 aa		10.21	□□□□□ -0.77
SH3YL1-223	ENST00000481932	GMPS	P49915	693 aa	Predicted RBP	10.2	□□□□□ -0.78
SH3YL1-223	ENST00000481932	CXCL9	Q07325	125 aa		10.2	□□□□□ -0.78
SH3YL1-223	ENST00000481932	CIAPIN1	Q6FI81	312 aa		10.2	□□□□□ -0.78
SH3YL1-223	ENST00000481932	METTL3	Q86U44	580 aa	Known RBP	10.2	□□□□□ -0.78
SH3YL1-223	ENST00000481932	ZNF428	Q96B54	188 aa		10.2	□□□□□ -0.78
SH3YL1-223	ENST00000481932	IFT57	Q9NWB7	429 aa		10.2	□□□□□ -0.78
SH3YL1-223	ENST00000481932	ATP5J2-PTCD1	G3V325	749 aa		10.19	□□□□□ -0.78
SH3YL1-223	ENST00000481932	ZNF853	P0CG23	659 aa		10.19	□□□□□ -0.78
SH3YL1-223	ENST00000481932	CALD1	Q05682	793 aa	Known RBP	10.19	□□□□□ -0.78
SH3YL1-223	ENST00000481932	TMEM132A	Q24JP5	1023 aa		10.19	□□□□□ -0.78
SH3YL1-223	ENST00000481932	ERICH6	Q7L0X2	663 aa		10.19	□□□□□ -0.78
SH3YL1-223	ENST00000481932	FAM89A	Q96GI7	184 aa		10.19	□□□□□ -0.78
SH3YL1-223	ENST00000481932	WDR33	Q9C0J8	1336 aa	Known RBP	10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	YDJC	A8MPS7	323 aa		10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	TRAF5	O00463	557 aa		10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	RAD17	O75943	681 aa		10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	CTCF	P49711	727 aa	Predicted RBP	10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	GNAI1	P63096	354 aa		10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	KCNC4	Q03721	635 aa		10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	FMR1	Q06787	632 aa	Known RBP eCLIP	10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	TNIP1	Q15025	636 aa		10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	SF3B3	Q15393	1217 aa	Known RBP	10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	DEFB115	Q30KQ5	88 aa		10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	CELF1	Q92879	486 aa	Known RBP	10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	PRR14	Q9BWN1	585 aa		10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	PRDM10	Q9NQV6	1147 aa		10.18	□□□□□ -0.78
SH3YL1-223	ENST00000481932	PSME4	Q14997	1843 aa		10.17	□□□□□ -0.78
SH3YL1-223	ENST00000481932	IRS4	O14654	1257 aa	Predicted RBP	10.17	□□□□□ -0.78
SH3YL1-223	ENST00000481932	APAF1	O14727	1248 aa		10.17	□□□□□ -0.78
SH3YL1-223	ENST00000481932	TRIM28	Q13263	835 aa	Known RBP	10.17	□□□□□ -0.78
SH3YL1-223	ENST00000481932	RTL5	Q5HYW3	569 aa	Predicted RBP	10.17	□□□□□ -0.78
SH3YL1-223	ENST00000481932	RIC3	Q7Z5B4	369 aa		10.17	□□□□□ -0.78
SH3YL1-223	ENST00000481932	TRPM4	Q8TD43	1214 aa		10.17	□□□□□ -0.78
SH3YL1-223	ENST00000481932	BCL2L13	Q9BXK5	485 aa		10.17	□□□□□ -0.78
SH3YL1-223	ENST00000481932	TLL2	Q9Y6L7	1015 aa		10.17	□□□□□ -0.78
SH3YL1-223	ENST00000481932	ZNF609	O15014	1411 aa		10.16	□□□□□ -0.78
SH3YL1-223	ENST00000481932	ECE1	P42892	770 aa		10.16	□□□□□ -0.78
SH3YL1-223	ENST00000481932	MAP2K1	Q02750	393 aa	Predicted RBP	10.16	□□□□□ -0.78
SH3YL1-223	ENST00000481932	WASHC4	Q2M389	1173 aa		10.16	□□□□□ -0.78
SH3YL1-223	ENST00000481932	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.16	□□□□□ -0.78
SH3YL1-223	ENST00000481932	CAPNS2	Q96L46	248 aa		10.16	□□□□□ -0.78
SH3YL1-223	ENST00000481932	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.16	□□□□□ -0.78
SH3YL1-223	ENST00000481932	PHAX	Q9H814	394 aa	Known RBP	10.16	□□□□□ -0.78
SH3YL1-223	ENST00000481932	DBNDD1	Q9H9R9	158 aa		10.16	□□□□□ -0.78
SH3YL1-223	ENST00000481932	SPEF2	Q9C093	1822 aa		10.16	□□□□□ -0.78
SH3YL1-223	ENST00000481932	SCN9A	Q15858	1988 aa		10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	MYH3	P11055	1940 aa		10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	RTL9	Q8NET4	1388 aa		10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	SHTN1	A0MZ66	631 aa		10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	PSMD14	O00487	310 aa		10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	ECE2	O60344	883 aa		10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	CELF2	O95319	508 aa	Known RBP	10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	HSPA8	P11142	646 aa	Known RBP	10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	HSP90B1	P14625	803 aa	Known RBP	10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	GPSM2	P81274	684 aa		10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	CST9	Q5W186	159 aa		10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	CYP4F22	Q6NT55	531 aa		10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	CCDC191	Q8NCU4	936 aa		10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	ZC3H15	Q8WU90	426 aa	Known RBP	10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	EYA3	Q99504	573 aa		10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	MYD88	Q99836	296 aa		10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.15	□□□□□ -0.78
SH3YL1-223	ENST00000481932	C6orf229	H3BNL8	230 aa		10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	ELL2	O00472	640 aa	Predicted RBP	10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	DDX58	O95786	925 aa	Known RBP	10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	PCCA	P05165	728 aa	Predicted RBP	10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	RPS12	P25398	132 aa	Known RBP	10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	LBX1	P52954	281 aa		10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	HIRA	P54198	1017 aa	Predicted RBP	10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	MAP2K5	Q13163	448 aa		10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	GRM1	Q13255	1194 aa		10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	CCDC152	Q4G0S7	254 aa		10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	CCDC30	Q5VVM6	783 aa		10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	SAPCD2	Q86UD0	394 aa		10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	CWC25	Q9NXE8	425 aa	Predicted RBP	10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	POLL	Q9UGP5	575 aa		10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	PGAP2	Q9UHJ9	254 aa		10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	CNOT7	Q9UIV1	285 aa	Known RBP	10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932	ZNF646	O15015	1829 aa	Predicted RBP	10.14	□□□□□ -0.79
SH3YL1-223	ENST00000481932		H7C1D1	291 aa		10.13	□□□□□ -0.79
SH3YL1-223	ENST00000481932	PDE8A	O60658	829 aa		10.13	□□□□□ -0.79
SH3YL1-223	ENST00000481932	UFL1	O94874	794 aa		10.13	□□□□□ -0.79
SH3YL1-223	ENST00000481932	RPS8	P62241	208 aa	Known RBP	10.13	□□□□□ -0.79
SH3YL1-223	ENST00000481932	TJAP1	Q5JTD0	557 aa		10.13	□□□□□ -0.79
SH3YL1-223	ENST00000481932	C8orf58	Q8NAV2	365 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms