RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 IL1RAPL2Q9NP60 686 aa12.35□□□□□ -0.43
EWSR1-216ENST00000479135 IQANK1A0A1B0GTG1 560 aa12.34□□□□□ -0.43
EWSR1-216ENST00000479135 DDIT3P35638 169 aa12.34□□□□□ -0.43
EWSR1-216ENST00000479135 SKA2Q8WVK7 121 aaPredicted RBP12.34□□□□□ -0.43
EWSR1-216ENST00000479135 GEMIN8Q9NWZ8 242 aaKnown RBP12.34□□□□□ -0.43
EWSR1-216ENST00000479135 NBPF10Q6P3W6 841 aaKnown RBP12.34□□□□□ -0.43
EWSR1-216ENST00000479135 ANKRD42Q8N9B4 389 aa12.34□□□□□ -0.43
EWSR1-216ENST00000479135 EIF4E1BA6NMX2 242 aaKnown RBP12.34□□□□□ -0.43
EWSR1-216ENST00000479135 KIAA1524Q8TCG1 905 aa12.34□□□□□ -0.43
EWSR1-216ENST00000479135 ZFYVE19Q96K21 471 aa12.34□□□□□ -0.43
EWSR1-216ENST00000479135 RANBP1P43487 201 aa12.34□□□□□ -0.43
EWSR1-216ENST00000479135 CCDC183Q5T5S1 534 aa12.34□□□□□ -0.43
EWSR1-216ENST00000479135 L3MBTL2Q969R5 705 aa12.34□□□□□ -0.43
EWSR1-216ENST00000479135 TRIM8Q9BZR9 551 aa12.34□□□□□ -0.43
EWSR1-216ENST00000479135 N4BP3O15049 544 aa12.33□□□□□ -0.43
EWSR1-216ENST00000479135 KRT5P13647 590 aa12.33□□□□□ -0.43
EWSR1-216ENST00000479135 CWF19L2Q2TBE0 894 aaKnown RBP12.33□□□□□ -0.43
EWSR1-216ENST00000479135 TRMT10CQ7L0Y3 403 aaKnown RBP12.33□□□□□ -0.43
EWSR1-216ENST00000479135 PPHLN1Q8NEY8 458 aaKnown RBP12.33□□□□□ -0.43
EWSR1-216ENST00000479135 TRPC3Q13507 836 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 RPAP2Q8IXW5 612 aaPredicted RBP12.33□□□□□ -0.44
EWSR1-216ENST00000479135 KIAA2013Q8IYS2 634 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 NUTM2BA6NNL0 878 aaPredicted RBP12.33□□□□□ -0.44
EWSR1-216ENST00000479135 NUTM2EB1AL46 878 aaPredicted RBP12.33□□□□□ -0.44
EWSR1-216ENST00000479135 DAPK3O43293 454 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 IGBP1P78318 339 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 SP4Q02446 784 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 IFI16Q16666 785 aaKnown RBP12.33□□□□□ -0.44
EWSR1-216ENST00000479135 NUTM2AQ8IVF1 878 aaPredicted RBP12.33□□□□□ -0.44
EWSR1-216ENST00000479135 TEX11Q8IYF3 940 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 DDAH1O94760 285 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 HIP1O00291 1037 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 CAPN12Q6ZSI9 719 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 CEP70Q8NHQ1 597 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 STAG1Q8WVM7 1258 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 MPHOSPH9Q99550 1183 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 NDUFAB1O14561 156 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 LMNAP02545 664 aaKnown RBP12.33□□□□□ -0.44
EWSR1-216ENST00000479135 HARSP12081 509 aaKnown RBP12.33□□□□□ -0.44
EWSR1-216ENST00000479135 CNGA1P29973 690 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 PCYT1AP49585 367 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 ZNF569Q5MCW4 686 aa12.33□□□□□ -0.44
EWSR1-216ENST00000479135 SLC24A3Q9HC58 644 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 KCNA4P22459 653 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 CAPN9O14815 690 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 METTL24Q5JXM2 366 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 TTC19Q6DKK2 380 aaPredicted RBP12.32□□□□□ -0.44
EWSR1-216ENST00000479135 CALML4Q96GE6 196 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 CCDC68Q9H2F9 335 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 FAM204AQ9H8W3 233 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 KRT3P12035 628 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 CCDC144BQ3MJ40 725 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 CCDC117Q8IWD4 279 aaPredicted RBP12.32□□□□□ -0.44
EWSR1-216ENST00000479135 MSANTD4Q8NCY6 345 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 SPZ1Q9BXG8 430 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 FHOD3Q2V2M9 1422 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 UACAQ9BZF9 1416 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 GNGT2O14610 69 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 GRK2P25098 689 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 TAB3Q8N5C8 712 aaPredicted RBP12.32□□□□□ -0.44
EWSR1-216ENST00000479135 AIDAQ96BJ3 306 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 OCM2P0CE71 109 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 OCMP0CE72 109 aaPredicted RBP12.32□□□□□ -0.44
EWSR1-216ENST00000479135 LMNB2Q03252 620 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 FLOT2Q14254 428 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 KRT80Q6KB66 452 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 RASEFQ8IZ41 740 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 RAPGEF4Q8WZA2 1011 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 INTUQ9ULD6 942 aa12.32□□□□□ -0.44
EWSR1-216ENST00000479135 CTAGE5O15320 804 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 RRAGBQ5VZM2 374 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 MCM4P33991 863 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 UBASH3AP57075 661 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 TBCCQ15814 346 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 ZC3H12BQ5HYM0 836 aaKnown RBP12.31□□□□□ -0.44
EWSR1-216ENST00000479135 HELBQ8NG08 1087 aaPredicted RBP12.31□□□□□ -0.44
EWSR1-216ENST00000479135 GOLGA1Q92805 767 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 FIS1Q9Y3D6 152 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.31□□□□□ -0.44
EWSR1-216ENST00000479135 KRT17Q04695 432 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 SH3BP5LQ7L8J4 393 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 NLRP13Q86W25 1043 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 MAN1A2O60476 641 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 AHI1Q8N157 1196 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 HHATQ5VTY9 493 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 CCDC138Q96M89 665 aa12.31□□□□□ -0.44
EWSR1-216ENST00000479135 IQCA1Q86XH1 822 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 MAGED2Q9UNF1 606 aaPredicted RBP12.3□□□□□ -0.44
EWSR1-216ENST00000479135 LEO1Q8WVC0 666 aaPredicted RBP12.3□□□□□ -0.44
EWSR1-216ENST00000479135 ATP6V0A1Q93050 837 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 C8orf76Q96K31 380 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 TTC12Q9H892 705 aaPredicted RBP12.3□□□□□ -0.44
EWSR1-216ENST00000479135 ZNF711Q9Y462 761 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 GIMAP6Q6P9H5 292 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 FAM186BQ8IYM0 893 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 WASF1Q92558 559 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 PLVAPQ9BX97 442 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 DNAJC6O75061 913 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 SSRP1Q08945 709 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms