RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 DZANK1Q9NVP4 752 aa4.9□□□□□ -1.63
CACUL1-202ENST00000477583 SEPT3Q9UH03 358 aa4.9□□□□□ -1.63
CACUL1-202ENST00000477583 SOX13Q9UN79 622 aa4.9□□□□□ -1.63
CACUL1-202ENST00000477583 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.9□□□□□ -1.63
CACUL1-202ENST00000477583 PCSK2P16519 638 aa4.89□□□□□ -1.63
CACUL1-202ENST00000477583 ATP2B4P23634 1241 aa4.89□□□□□ -1.63
CACUL1-202ENST00000477583 DNM1Q05193 864 aaKnown RBP4.89□□□□□ -1.63
CACUL1-202ENST00000477583 C19orf57Q0VDD7 668 aa4.89□□□□□ -1.63
CACUL1-202ENST00000477583 XKR5Q6UX68 686 aa4.89□□□□□ -1.63
CACUL1-202ENST00000477583 RETREG2Q8NC44 543 aa4.89□□□□□ -1.63
CACUL1-202ENST00000477583 TTC16Q8NEE8 873 aa4.89□□□□□ -1.63
CACUL1-202ENST00000477583 GIMAP7Q8NHV1 300 aa4.89□□□□□ -1.63
CACUL1-202ENST00000477583 HHIPQ96QV1 700 aa4.89□□□□□ -1.63
CACUL1-202ENST00000477583 SLAIN2Q9P270 581 aa4.89□□□□□ -1.63
CACUL1-202ENST00000477583 A6NHS1 94 aa4.88□□□□□ -1.63
CACUL1-202ENST00000477583 TRPA1O75762 1119 aa4.88□□□□□ -1.63
CACUL1-202ENST00000477583 MAP4P27816 1152 aaKnown RBP4.88□□□□□ -1.63
CACUL1-202ENST00000477583 RXRBP28702 533 aa4.88□□□□□ -1.63
CACUL1-202ENST00000477583 C8orf34Q49A92 452 aa4.88□□□□□ -1.63
CACUL1-202ENST00000477583 SGO2Q562F6 1265 aa4.88□□□□□ -1.63
CACUL1-202ENST00000477583 TMEM102Q8N9M5 508 aaPredicted RBP4.88□□□□□ -1.63
CACUL1-202ENST00000477583 HELQQ8TDG4 1101 aa4.88□□□□□ -1.63
CACUL1-202ENST00000477583 CHRDQ9H2X0 955 aa4.88□□□□□ -1.63
CACUL1-202ENST00000477583 PIM2Q9P1W9 311 aa4.88□□□□□ -1.63
CACUL1-202ENST00000477583 CARNS1A5YM72 827 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 MEGF11A6BM72 1044 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 PDGFAP04085 211 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 HOXA10P31260 410 aaPredicted RBP4.87□□□□□ -1.63
CACUL1-202ENST00000477583 IKBKEQ14164 716 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 NOM1Q5C9Z4 860 aaKnown RBP4.87□□□□□ -1.63
CACUL1-202ENST00000477583 NUTM2GQ5VZR2 741 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 HGSNATQ68CP4 663 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 HOMEZQ8IX15 550 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 PMEPA1Q969W9 287 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 OSMRQ99650 979 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 USP26Q9BXU7 913 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 GGNBP2Q9H3C7 697 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 CYP4F12Q9HCS2 524 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 ATG3Q9NT62 314 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 ADGRE2Q9UHX3 823 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 ANGEL1Q9UNK9 670 aaKnown RBP4.87□□□□□ -1.63
CACUL1-202ENST00000477583 LEMD3Q9Y2U8 911 aa4.87□□□□□ -1.63
CACUL1-202ENST00000477583 TMEM88BA6NKF7 163 aa4.86□□□□□ -1.63
CACUL1-202ENST00000477583 MPSTP25325 297 aa4.86□□□□□ -1.63
CACUL1-202ENST00000477583 MZF1P28698 734 aaPredicted RBP4.86□□□□□ -1.63
CACUL1-202ENST00000477583 FBXL6Q8N531 539 aa4.86□□□□□ -1.63
CACUL1-202ENST00000477583 C12orf50Q8NA57 414 aaPredicted RBP4.86□□□□□ -1.63
CACUL1-202ENST00000477583 SMG8Q8ND04 991 aaKnown RBP4.86□□□□□ -1.63
CACUL1-202ENST00000477583 BSNDQ8WZ55 320 aa4.86□□□□□ -1.63
CACUL1-202ENST00000477583 ZKSCAN3Q9BRR0 538 aa4.86□□□□□ -1.63
CACUL1-202ENST00000477583 OSBPL1AQ9BXW6 950 aa4.86□□□□□ -1.63
CACUL1-202ENST00000477583 TMPRSS13Q9BYE2 586 aa4.86□□□□□ -1.63
CACUL1-202ENST00000477583 SOX1O00570 391 aaPredicted RBP4.85□□□□□ -1.63
CACUL1-202ENST00000477583 EREGO14944 169 aa4.85□□□□□ -1.63
CACUL1-202ENST00000477583 TIAF1O95411 115 aa4.85□□□□□ -1.63
CACUL1-202ENST00000477583 F13BP05160 661 aa4.85□□□□□ -1.63
CACUL1-202ENST00000477583 EDN3P14138 238 aa4.85□□□□□ -1.63
CACUL1-202ENST00000477583 FOSL1P15407 271 aa4.85□□□□□ -1.63
CACUL1-202ENST00000477583 CPSF6Q16630 551 aaKnown RBP eCLIP4.85□□□□□ -1.63
CACUL1-202ENST00000477583 VN1R5Q7Z5H4 357 aa4.85□□□□□ -1.63
CACUL1-202ENST00000477583 ABI1Q8IZP0 508 aa4.85□□□□□ -1.63
CACUL1-202ENST00000477583 ASAP3Q8TDY4 903 aa4.85□□□□□ -1.63
CACUL1-202ENST00000477583 NXPE3Q969Y0 559 aa4.85□□□□□ -1.63
CACUL1-202ENST00000477583 SUGCTQ9HAC7 445 aa4.85□□□□□ -1.63
CACUL1-202ENST00000477583 LOC100289279A0A1B0GTE1 492 aa4.84□□□□□ -1.63
CACUL1-202ENST00000477583 FAM95CA0A1B0GW59 222 aa4.84□□□□□ -1.63
CACUL1-202ENST00000477583 PHACTR2O75167 634 aa4.84□□□□□ -1.63
CACUL1-202ENST00000477583 EIF1AXP47813 144 aaKnown RBP4.84□□□□□ -1.63
CACUL1-202ENST00000477583 USP11P51784 963 aa4.84□□□□□ -1.63
CACUL1-202ENST00000477583 NFKBIBQ15653 356 aa4.84□□□□□ -1.63
CACUL1-202ENST00000477583 MSMPQ1L6U9 139 aa4.84□□□□□ -1.63
CACUL1-202ENST00000477583 ALKBH2Q6NS38 261 aa4.84□□□□□ -1.63
CACUL1-202ENST00000477583 PAOXQ6QHF9 649 aa4.84□□□□□ -1.63
CACUL1-202ENST00000477583 SNX29Q8TEQ0 813 aa4.84□□□□□ -1.63
CACUL1-202ENST00000477583 SOX17Q9H6I2 414 aaPredicted RBP4.84□□□□□ -1.63
CACUL1-202ENST00000477583 POLIQ9UNA4 740 aa4.84□□□□□ -1.63
CACUL1-202ENST00000477583 USTQ9Y2C2 406 aa4.84□□□□□ -1.63
CACUL1-202ENST00000477583 TNFRSF21O75509 655 aa4.83□□□□□ -1.64
CACUL1-202ENST00000477583 FBLIM1Q8WUP2 373 aa4.83□□□□□ -1.64
CACUL1-202ENST00000477583 METTL22Q9BUU2 404 aaPredicted RBP4.83□□□□□ -1.64
CACUL1-202ENST00000477583 YIPF2Q9BWQ6 316 aa4.83□□□□□ -1.64
CACUL1-202ENST00000477583 CCDC39Q9UFE4 941 aa4.83□□□□□ -1.64
CACUL1-202ENST00000477583 DLGAP3O95886 979 aa4.82□□□□□ -1.64
CACUL1-202ENST00000477583 PRNPP04156 253 aa4.82□□□□□ -1.64
CACUL1-202ENST00000477583 ESRRAP11474 423 aaPredicted RBP4.82□□□□□ -1.64
CACUL1-202ENST00000477583 PDIA4P13667 645 aaKnown RBP4.82□□□□□ -1.64
CACUL1-202ENST00000477583 DRD2P14416 443 aa4.82□□□□□ -1.64
CACUL1-202ENST00000477583 GSTM4Q03013 218 aa4.82□□□□□ -1.64
CACUL1-202ENST00000477583 EHHADHQ08426 723 aa4.82□□□□□ -1.64
CACUL1-202ENST00000477583 MTMR3Q13615 1198 aa4.82□□□□□ -1.64
CACUL1-202ENST00000477583 AAMPQ13685 434 aa4.82□□□□□ -1.64
CACUL1-202ENST00000477583 EXOSC6Q5RKV6 272 aaKnown RBP4.82□□□□□ -1.64
CACUL1-202ENST00000477583 CDPF1Q6NVV7 123 aa4.82□□□□□ -1.64
CACUL1-202ENST00000477583 VSIG10LQ86VR7 867 aa4.82□□□□□ -1.64
CACUL1-202ENST00000477583 C2CD4AQ8NCU7 369 aaPredicted RBP4.82□□□□□ -1.64
CACUL1-202ENST00000477583 GTF3C2Q8WUA4 911 aaPredicted RBP4.82□□□□□ -1.64
CACUL1-202ENST00000477583 FBXL18Q96ME1 805 aa4.82□□□□□ -1.64
CACUL1-202ENST00000477583 TBC1D32Q96NH3 1257 aa4.82□□□□□ -1.64
CACUL1-202ENST00000477583 BHLHE41Q9C0J9 482 aaPredicted RBP4.82□□□□□ -1.64
CACUL1-202ENST00000477583 FOXD3Q9UJU5 478 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms