RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 HIBADHP31937 336 aaKnown RBP10.33□□□□□ -0.76
HDAC6-221ENST00000477561 CERS5Q8N5B7 392 aa10.33□□□□□ -0.76
HDAC6-221ENST00000477561 VGLL2Q8N8G2 317 aa10.33□□□□□ -0.76
HDAC6-221ENST00000477561 PA2G4Q9UQ80 394 aaKnown RBP10.33□□□□□ -0.76
HDAC6-221ENST00000477561 CNTNAP1P78357 1384 aa10.33□□□□□ -0.76
HDAC6-221ENST00000477561 ZNF609O15014 1411 aa10.33□□□□□ -0.76
HDAC6-221ENST00000477561 RASSF10A6NK89 507 aa10.32□□□□□ -0.76
HDAC6-221ENST00000477561 GNAI3P08754 354 aa10.32□□□□□ -0.76
HDAC6-221ENST00000477561 BCAMP50895 628 aa10.32□□□□□ -0.76
HDAC6-221ENST00000477561 ATG9AQ7Z3C6 839 aa10.32□□□□□ -0.76
HDAC6-221ENST00000477561 VPS37DQ86XT2 251 aa10.32□□□□□ -0.76
HDAC6-221ENST00000477561 SULF1Q8IWU6 871 aa10.32□□□□□ -0.76
HDAC6-221ENST00000477561 HDAC9Q9UKV0 1011 aa10.32□□□□□ -0.76
HDAC6-221ENST00000477561 HDAC5Q9UQL6 1122 aa10.32□□□□□ -0.76
HDAC6-221ENST00000477561 PCDHAC2Q9Y5I4 1007 aa10.32□□□□□ -0.76
HDAC6-221ENST00000477561 PSME4Q14997 1843 aa10.32□□□□□ -0.76
HDAC6-221ENST00000477561 WNT10BO00744 389 aa10.31□□□□□ -0.76
HDAC6-221ENST00000477561 SRGAP3O43295 1099 aa10.31□□□□□ -0.76
HDAC6-221ENST00000477561 CHAF1AQ13111 956 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-221ENST00000477561 PRAMEF18Q5VWM3 479 aa10.31□□□□□ -0.76
HDAC6-221ENST00000477561 CYP4F22Q6NT55 531 aa10.31□□□□□ -0.76
HDAC6-221ENST00000477561 FBXO33Q7Z6M2 555 aa10.31□□□□□ -0.76
HDAC6-221ENST00000477561 FTSJ3Q8IY81 847 aaKnown RBP10.31□□□□□ -0.76
HDAC6-221ENST00000477561 TDRD7Q8NHU6 1098 aaKnown RBP10.31□□□□□ -0.76
HDAC6-221ENST00000477561 RNF39Q9H2S5 420 aa10.31□□□□□ -0.76
HDAC6-221ENST00000477561 TLL2Q9Y6L7 1015 aa10.31□□□□□ -0.76
HDAC6-221ENST00000477561 WDR33Q9C0J8 1336 aaKnown RBP10.31□□□□□ -0.76
HDAC6-221ENST00000477561 ZNF646O15015 1829 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-221ENST00000477561 FRAT2O75474 233 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-221ENST00000477561 GNAI2P04899 355 aa10.3□□□□□ -0.76
HDAC6-221ENST00000477561 IFIT1P09914 478 aaKnown RBP10.3□□□□□ -0.76
HDAC6-221ENST00000477561 HSPA1AP0DMV8 641 aaKnown RBP10.3□□□□□ -0.76
HDAC6-221ENST00000477561 HSPA1BP0DMV9 641 aaKnown RBP10.3□□□□□ -0.76
HDAC6-221ENST00000477561 RLBP1P12271 317 aa10.3□□□□□ -0.76
HDAC6-221ENST00000477561 FGFR2P21802 821 aa10.3□□□□□ -0.76
HDAC6-221ENST00000477561 RBM5P52756 815 aaKnown RBP eCLIP10.3□□□□□ -0.76
HDAC6-221ENST00000477561 PUM3Q15397 648 aaKnown RBP10.3□□□□□ -0.76
HDAC6-221ENST00000477561 CAVIN4Q5BKX8 364 aa10.3□□□□□ -0.76
HDAC6-221ENST00000477561 SAPCD2Q86UD0 394 aa10.3□□□□□ -0.76
HDAC6-221ENST00000477561 DZIP1LQ8IYY4 767 aaKnown RBP10.3□□□□□ -0.76
HDAC6-221ENST00000477561 CDCA5Q96FF9 252 aa10.3□□□□□ -0.76
HDAC6-221ENST00000477561 CAPNS2Q96L46 248 aa10.3□□□□□ -0.76
HDAC6-221ENST00000477561 C1orf115Q9H7X2 142 aa10.3□□□□□ -0.76
HDAC6-221ENST00000477561 CEP126Q9P2H0 1117 aa10.3□□□□□ -0.76
HDAC6-221ENST00000477561 FAM205AQ6ZU69 1335 aa10.3□□□□□ -0.76
HDAC6-221ENST00000477561 POLR2AP24928 1970 aaKnown RBP10.29□□□□□ -0.76
HDAC6-221ENST00000477561 CIAO1O76071 339 aa10.29□□□□□ -0.76
HDAC6-221ENST00000477561 SLC5A1P13866 664 aa10.29□□□□□ -0.76
HDAC6-221ENST00000477561 IL15P40933 162 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-221ENST00000477561 DLGAP5Q15398 846 aa10.29□□□□□ -0.76
HDAC6-221ENST00000477561 GRIK5Q16478 980 aa10.29□□□□□ -0.76
HDAC6-221ENST00000477561 CFAP100Q494V2 611 aa10.29□□□□□ -0.76
HDAC6-221ENST00000477561 MFSD14BQ5SR56 506 aa10.29□□□□□ -0.76
HDAC6-221ENST00000477561 ITPRIPQ8IWB1 547 aa10.29□□□□□ -0.76
HDAC6-221ENST00000477561 PANK1Q8TE04 598 aa10.29□□□□□ -0.76
HDAC6-221ENST00000477561 LPIN2Q92539 896 aa10.29□□□□□ -0.76
HDAC6-221ENST00000477561 COPRSQ9NQ92 184 aa10.29□□□□□ -0.76
HDAC6-221ENST00000477561 TTF2Q9UNY4 1162 aaKnown RBP10.29□□□□□ -0.76
HDAC6-221ENST00000477561 TRPM7Q96QT4 1865 aa10.29□□□□□ -0.76
HDAC6-221ENST00000477561 PNMA6EA0A0J9YXQ4 647 aa10.28□□□□□ -0.76
HDAC6-221ENST00000477561 AOC2O75106 756 aa10.28□□□□□ -0.76
HDAC6-221ENST00000477561 HUNKP57058 714 aa10.28□□□□□ -0.76
HDAC6-221ENST00000477561 FKBP1AP62942 108 aaKnown RBP10.28□□□□□ -0.76
HDAC6-221ENST00000477561 ATP2B3Q16720 1220 aa10.28□□□□□ -0.76
HDAC6-221ENST00000477561 C2orf69Q8N8R5 385 aa10.28□□□□□ -0.76
HDAC6-221ENST00000477561 ZBED3Q96IU2 234 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-221ENST00000477561 PRMT6Q96LA8 375 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-221ENST00000477561 GBA2Q9HCG7 927 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-221ENST00000477561 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
HDAC6-221ENST00000477561 AOX1Q06278 1338 aa10.28□□□□□ -0.76
HDAC6-221ENST00000477561 PITPNM2Q9BZ72 1349 aa10.28□□□□□ -0.76
HDAC6-221ENST00000477561 CLRN2A0PK11 232 aa10.27□□□□□ -0.77
HDAC6-221ENST00000477561 ADORA1P30542 326 aa10.27□□□□□ -0.77
HDAC6-221ENST00000477561 ECE1P42892 770 aa10.27□□□□□ -0.77
HDAC6-221ENST00000477561 MMP14P50281 582 aa10.27□□□□□ -0.77
HDAC6-221ENST00000477561 TIMM10P62072 90 aa10.27□□□□□ -0.77
HDAC6-221ENST00000477561 TFCP2Q12800 502 aa10.27□□□□□ -0.77
HDAC6-221ENST00000477561 MTX1Q13505 466 aa10.27□□□□□ -0.77
HDAC6-221ENST00000477561 MOB2Q70IA6 237 aa10.27□□□□□ -0.77
HDAC6-221ENST00000477561 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-221ENST00000477561 SPDYE2BA6NHP3 402 aa10.26□□□□□ -0.77
HDAC6-221ENST00000477561 ZBTB7BO15156 539 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-221ENST00000477561 NEFLP07196 543 aa10.26□□□□□ -0.77
HDAC6-221ENST00000477561 SPDYE6P0CI01 402 aa10.26□□□□□ -0.77
HDAC6-221ENST00000477561 G3BP1Q13283 466 aaKnown RBP eCLIP10.26□□□□□ -0.778e-6■□□□□ 9
HDAC6-221ENST00000477561 PRKG1Q13976 671 aa10.26□□□□□ -0.77
HDAC6-221ENST00000477561 TTLL12Q14166 644 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-221ENST00000477561 MTMR14Q8NCE2 650 aa10.26□□□□□ -0.77
HDAC6-221ENST00000477561 ZIC5Q96T25 663 aa10.26□□□□□ -0.77
HDAC6-221ENST00000477561 VEZTQ9HBM0 779 aa10.26□□□□□ -0.77
HDAC6-221ENST00000477561 RCAN3Q9UKA8 241 aa10.26□□□□□ -0.77
HDAC6-221ENST00000477561 UBE2Q2LH0YL09 131 aa10.25□□□□□ -0.77
HDAC6-221ENST00000477561 FOXN1O15353 648 aa10.25□□□□□ -0.77
HDAC6-221ENST00000477561 MYO1BO43795 1136 aa10.25□□□□□ -0.77
HDAC6-221ENST00000477561 PHKA1P46020 1223 aa10.25□□□□□ -0.77
HDAC6-221ENST00000477561 CRKP46108 304 aa10.25□□□□□ -0.77
HDAC6-221ENST00000477561 ZNF157P51786 506 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-221ENST00000477561 ATP8B2P98198 1209 aa10.25□□□□□ -0.77
HDAC6-221ENST00000477561 COL13A1Q5TAT6 717 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-221ENST00000477561 RGMBQ6NW40 437 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms