RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 CLASRPQ8N2M8 674 aaKnown RBP19.52■□□□□ 0.72
COPS3-207ENST00000477299 NMRK2Q9NPI5 230 aa19.52■□□□□ 0.72
COPS3-207ENST00000477299 NDUFB9Q9Y6M9 179 aa19.52■□□□□ 0.72
COPS3-207ENST00000477299 ZC3H4Q9UPT8 1303 aaKnown RBP19.51■□□□□ 0.71
COPS3-207ENST00000477299 GMPSP49915 693 aaPredicted RBP19.51■□□□□ 0.71
COPS3-207ENST00000477299 DPY19L2Q6NUT2 758 aa19.51■□□□□ 0.71
COPS3-207ENST00000477299 GPC2Q8N158 579 aa19.51■□□□□ 0.71
COPS3-207ENST00000477299 GCC1Q96CN9 775 aa19.51■□□□□ 0.71
COPS3-207ENST00000477299 RRAGCQ9HB90 399 aa19.51■□□□□ 0.71
COPS3-207ENST00000477299 SNRKQ9NRH2 765 aa19.51■□□□□ 0.71
COPS3-207ENST00000477299 WDR90Q96KV7 1748 aa19.51■□□□□ 0.71
COPS3-207ENST00000477299 SCNN1DP51172 638 aa19.5■□□□□ 0.71
COPS3-207ENST00000477299 RASGRF1Q13972 1273 aa19.5■□□□□ 0.71
COPS3-207ENST00000477299 TNIP1Q15025 636 aa19.5■□□□□ 0.71
COPS3-207ENST00000477299 STRIP1Q5VSL9 837 aa19.5■□□□□ 0.71
COPS3-207ENST00000477299 TSHZ3Q63HK5 1081 aa19.5■□□□□ 0.71
COPS3-207ENST00000477299 GMLQ99445 158 aa19.5■□□□□ 0.71
COPS3-207ENST00000477299 FAM205AQ6ZU69 1335 aa19.5■□□□□ 0.71
COPS3-207ENST00000477299 ADAMTSL1Q8N6G6 1762 aa19.49■□□□□ 0.71
COPS3-207ENST00000477299 FRAT2O75474 233 aaPredicted RBP19.49■□□□□ 0.71
COPS3-207ENST00000477299 IFIT2P09913 472 aaKnown RBP19.49■□□□□ 0.71
COPS3-207ENST00000477299 EPS15P42566 896 aa19.49■□□□□ 0.71
COPS3-207ENST00000477299 MCAMP43121 646 aa19.49■□□□□ 0.71
COPS3-207ENST00000477299 RSBN1LQ6PCB5 846 aaPredicted RBP19.49■□□□□ 0.71
COPS3-207ENST00000477299 LNPKQ9C0E8 428 aa19.49■□□□□ 0.71
COPS3-207ENST00000477299 HMG20BQ9P0W2 317 aa19.49■□□□□ 0.71
COPS3-207ENST00000477299 ARID4AP29374 1257 aaPredicted RBP19.48■□□□□ 0.71
COPS3-207ENST00000477299 TTC39AQ5SRH9 613 aa19.48■□□□□ 0.71
COPS3-207ENST00000477299 ZNF784Q8NCA9 323 aaPredicted RBP19.48■□□□□ 0.71
COPS3-207ENST00000477299 SCN4AP35499 1836 aa19.48■□□□□ 0.71
COPS3-207ENST00000477299 POLR2AP24928 1970 aaKnown RBP19.48■□□□□ 0.71
COPS3-207ENST00000477299 F8W031 263 aaPredicted RBP19.47■□□□□ 0.71
COPS3-207ENST00000477299 TBC1D9Q6ZT07 1266 aa19.47■□□□□ 0.71
COPS3-207ENST00000477299 SKAP1Q86WV1 359 aa19.47■□□□□ 0.71
COPS3-207ENST00000477299 GNL3LQ9NVN8 582 aaKnown RBP19.47■□□□□ 0.71
COPS3-207ENST00000477299 EGFRP00533 1210 aa19.46■□□□□ 0.71
COPS3-207ENST00000477299 NUCB1Q02818 461 aa19.46■□□□□ 0.71
COPS3-207ENST00000477299 CCDC158Q5M9N0 1113 aa19.46■□□□□ 0.71
COPS3-207ENST00000477299 MFSD14BQ5SR56 506 aa19.46■□□□□ 0.71
COPS3-207ENST00000477299 KIAA0825Q8IV33 1275 aa19.46■□□□□ 0.71
COPS3-207ENST00000477299 L3MBTL3Q96JM7 780 aaPredicted RBP19.46■□□□□ 0.71
COPS3-207ENST00000477299 CNOT7Q9UIV1 285 aaKnown RBP19.46■□□□□ 0.71
COPS3-207ENST00000477299 PCDHAC2Q9Y5I4 1007 aa19.46■□□□□ 0.71
COPS3-207ENST00000477299 KDM2BQ8NHM5 1336 aa19.46■□□□□ 0.71
COPS3-207ENST00000477299 ZAP70P43403 619 aa19.45■□□□□ 0.7
COPS3-207ENST00000477299 SPATA5Q8NB90 893 aa19.45■□□□□ 0.7
COPS3-207ENST00000477299 GPRC5DQ9NZD1 345 aa19.45■□□□□ 0.7
COPS3-207ENST00000477299 DENND2AQ9ULE3 1009 aa19.45■□□□□ 0.7
COPS3-207ENST00000477299 SALL3Q9BXA9 1300 aa19.45■□□□□ 0.7
COPS3-207ENST00000477299 UQCRFS1P1P0C7P4 283 aa19.44■□□□□ 0.7
COPS3-207ENST00000477299 POTEIP0CG38 1075 aa19.44■□□□□ 0.7
COPS3-207ENST00000477299 POTEJP0CG39 1038 aa19.44■□□□□ 0.7
COPS3-207ENST00000477299 PDE4AP27815 886 aa19.44■□□□□ 0.7
COPS3-207ENST00000477299 SAMD7Q7Z3H4 446 aa19.44■□□□□ 0.7
COPS3-207ENST00000477299 CHD1LQ86WJ1 897 aa19.44■□□□□ 0.7
COPS3-207ENST00000477299 MICALL2Q8IY33 904 aa19.44■□□□□ 0.7
COPS3-207ENST00000477299 AGBL3Q8NEM8 1001 aa19.44■□□□□ 0.7
COPS3-207ENST00000477299 EDC3Q96F86 508 aaKnown RBP19.44■□□□□ 0.7
COPS3-207ENST00000477299 ANTXR1Q9H6X2 564 aa19.44■□□□□ 0.7
COPS3-207ENST00000477299 MYH2Q9UKX2 1941 aa19.43■□□□□ 0.7
COPS3-207ENST00000477299 CYP2E1P05181 493 aaPredicted RBP19.43■□□□□ 0.7
COPS3-207ENST00000477299 HIRAP54198 1017 aaPredicted RBP19.43■□□□□ 0.7
COPS3-207ENST00000477299 RBM26Q5T8P6 1007 aaKnown RBP19.43■□□□□ 0.7
COPS3-207ENST00000477299 CCDC136Q96JN2 1154 aa19.43■□□□□ 0.7
COPS3-207ENST00000477299 ZNF512BQ96KM6 892 aaPredicted RBP19.43■□□□□ 0.7
COPS3-207ENST00000477299 BOLA2Q9H3K6 86 aa19.43■□□□□ 0.7
COPS3-207ENST00000477299 GPBP1L1Q9HC44 474 aaPredicted RBP19.43■□□□□ 0.7
COPS3-207ENST00000477299 SEMA3EO15041 775 aa19.42■□□□□ 0.7
COPS3-207ENST00000477299 PRDX5P30044 214 aa19.42■□□□□ 0.7
COPS3-207ENST00000477299 TRPM4Q8TD43 1214 aa19.42■□□□□ 0.7
COPS3-207ENST00000477299 DPF2Q92785 391 aa19.42■□□□□ 0.7
COPS3-207ENST00000477299 PIH1D3Q9NQM4 214 aaKnown RBP19.42■□□□□ 0.7
COPS3-207ENST00000477299 HACL1Q9UJ83 578 aa19.42■□□□□ 0.7
COPS3-207ENST00000477299 AOX1Q06278 1338 aa19.42■□□□□ 0.7
COPS3-207ENST00000477299 KIF3CO14782 793 aa19.41■□□□□ 0.7
COPS3-207ENST00000477299 USP17L8P0C7I0 530 aa19.41■□□□□ 0.7
COPS3-207ENST00000477299 ATP5JP18859 108 aa19.41■□□□□ 0.7
COPS3-207ENST00000477299 TBC1D10BQ4KMP7 808 aaPredicted RBP19.41■□□□□ 0.7
COPS3-207ENST00000477299 WDR66Q8TBY9 1149 aa19.41■□□□□ 0.7
COPS3-207ENST00000477299 ZNF384Q8TF68 577 aa19.41■□□□□ 0.7
COPS3-207ENST00000477299 TAF1DQ9H5J8 278 aaPredicted RBP19.41■□□□□ 0.7
COPS3-207ENST00000477299 ECHDC1Q9NTX5 307 aa19.41■□□□□ 0.7
COPS3-207ENST00000477299 PPP4R2Q9NY27 417 aa19.41■□□□□ 0.7
COPS3-207ENST00000477299 ABCF2Q9UG63 623 aa19.41■□□□□ 0.7
COPS3-207ENST00000477299 TTF2Q9UNY4 1162 aaKnown RBP19.41■□□□□ 0.7
COPS3-207ENST00000477299 DOCK2Q92608 1830 aa19.41■□□□□ 0.7
COPS3-207ENST00000477299 ZBTB22O15209 634 aa19.4■□□□□ 0.7
COPS3-207ENST00000477299 MAP4K4O95819 1239 aaPredicted RBP19.4■□□□□ 0.7
COPS3-207ENST00000477299 VEGFAP15692 232 aaPredicted RBP19.4■□□□□ 0.7
COPS3-207ENST00000477299 RPS12P25398 132 aaKnown RBP19.4■□□□□ 0.7
COPS3-207ENST00000477299 EPHX2P34913 555 aa19.4■□□□□ 0.7
COPS3-207ENST00000477299 FKBP1AP62942 108 aaKnown RBP19.4■□□□□ 0.7
COPS3-207ENST00000477299 PI4K2BQ8TCG2 481 aa19.4■□□□□ 0.7
COPS3-207ENST00000477299 ASTN2O75129 1339 aaPredicted RBP19.4■□□□□ 0.7
COPS3-207ENST00000477299 MX1P20591 662 aa19.39■□□□□ 0.69
COPS3-207ENST00000477299 LMOD1P29536 600 aaPredicted RBP19.39■□□□□ 0.69
COPS3-207ENST00000477299 ZNF280AP59817 542 aaPredicted RBP19.39■□□□□ 0.69
COPS3-207ENST00000477299 DIXDC1Q155Q3 683 aa19.39■□□□□ 0.69
COPS3-207ENST00000477299 PLEKHM2Q8IWE5 1019 aa19.39■□□□□ 0.69
COPS3-207ENST00000477299 DNAJC2Q99543 621 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms