RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 CIAO1O76071 339 aa26.4■■□□□ 1.82
LIME1-204ENST00000476183 MMP14P50281 582 aa26.4■■□□□ 1.82
LIME1-204ENST00000476183 FKBP1AP62942 108 aaKnown RBP26.4■■□□□ 1.82
LIME1-204ENST00000476183 PUM3Q15397 648 aaKnown RBP26.4■■□□□ 1.82
LIME1-204ENST00000476183 SULF1Q8IWU6 871 aa26.4■■□□□ 1.82
LIME1-204ENST00000476183 FBXO3Q9UK99 471 aa26.4■■□□□ 1.82
LIME1-204ENST00000476183 SCAF8Q9UPN6 1271 aaKnown RBP26.4■■□□□ 1.82
LIME1-204ENST00000476183 RLBP1P12271 317 aa26.39■■□□□ 1.82
LIME1-204ENST00000476183 MTX1Q13505 466 aa26.39■■□□□ 1.82
LIME1-204ENST00000476183 SAPCD2Q86UD0 394 aa26.39■■□□□ 1.82
LIME1-204ENST00000476183 ZBED3Q96IU2 234 aaPredicted RBP26.39■■□□□ 1.82
LIME1-204ENST00000476183 COPRSQ9NQ92 184 aa26.39■■□□□ 1.82
LIME1-204ENST00000476183 HDAC9Q9UKV0 1011 aa26.39■■□□□ 1.82
LIME1-204ENST00000476183 PITPNM2Q9BZ72 1349 aa26.39■■□□□ 1.81
LIME1-204ENST00000476183 F8W031 263 aaPredicted RBP26.38■■□□□ 1.81
LIME1-204ENST00000476183 BCAMP50895 628 aa26.38■■□□□ 1.81
LIME1-204ENST00000476183 IQSEC3Q9UPP2 1182 aaPredicted RBP26.38■■□□□ 1.81
LIME1-204ENST00000476183 SRGAP3O43295 1099 aa26.37■■□□□ 1.81
LIME1-204ENST00000476183 GNAI2P04899 355 aa26.37■■□□□ 1.81
LIME1-204ENST00000476183 VPS37DQ86XT2 251 aa26.37■■□□□ 1.81
LIME1-204ENST00000476183 DZIP1LQ8IYY4 767 aaKnown RBP26.37■■□□□ 1.81
LIME1-204ENST00000476183 PCDHAC2Q9Y5I4 1007 aa26.37■■□□□ 1.81
LIME1-204ENST00000476183 WDR33Q9C0J8 1336 aaKnown RBP26.37■■□□□ 1.81
LIME1-204ENST00000476183 IFIT1P09914 478 aaKnown RBP26.36■■□□□ 1.81
LIME1-204ENST00000476183 CAVIN4Q5BKX8 364 aa26.36■■□□□ 1.81
LIME1-204ENST00000476183 MFSD14BQ5SR56 506 aa26.36■■□□□ 1.81
LIME1-204ENST00000476183 CYP4F22Q6NT55 531 aa26.36■■□□□ 1.81
LIME1-204ENST00000476183 FTSJ3Q8IY81 847 aaKnown RBP26.36■■□□□ 1.81
LIME1-204ENST00000476183 LPIN2Q92539 896 aa26.36■■□□□ 1.81
LIME1-204ENST00000476183 CDCA5Q96FF9 252 aa26.36■■□□□ 1.81
LIME1-204ENST00000476183 HSPA1AP0DMV8 641 aaKnown RBP26.35■■□□□ 1.81
LIME1-204ENST00000476183 HSPA1BP0DMV9 641 aaKnown RBP26.35■■□□□ 1.81
LIME1-204ENST00000476183 IL15P40933 162 aaPredicted RBP26.35■■□□□ 1.81
LIME1-204ENST00000476183 CEP126Q9P2H0 1117 aa26.35■■□□□ 1.81
LIME1-204ENST00000476183 SLC5A1P13866 664 aa26.34■■□□□ 1.81
LIME1-204ENST00000476183 PAXIP1Q6ZW49 1069 aaPredicted RBP26.34■■□□□ 1.81
LIME1-204ENST00000476183 CAPNS2Q96L46 248 aa26.34■■□□□ 1.81
LIME1-204ENST00000476183 ARAP2Q8WZ64 1704 aa26.34■■□□□ 1.81
LIME1-204ENST00000476183 PNMA6EA0A0J9YXQ4 647 aa26.33■■□□□ 1.81
LIME1-204ENST00000476183 CHAF1AQ13111 956 aaPredicted RBP26.33■■□□□ 1.81
LIME1-204ENST00000476183 MTMR14Q8NCE2 650 aa26.33■■□□□ 1.81
LIME1-204ENST00000476183 GBA2Q9HCG7 927 aaPredicted RBP26.33■■□□□ 1.81
LIME1-204ENST00000476183 DLGAP5Q15398 846 aa26.32■■□□□ 1.8
LIME1-204ENST00000476183 GRIK5Q16478 980 aa26.32■■□□□ 1.8
LIME1-204ENST00000476183 ATP2B3Q16720 1220 aa26.32■■□□□ 1.8
LIME1-204ENST00000476183 CFAP100Q494V2 611 aa26.32■■□□□ 1.8
LIME1-204ENST00000476183 ITPRIPQ8IWB1 547 aa26.32■■□□□ 1.8
LIME1-204ENST00000476183 HHIPL1Q96JK4 782 aa26.32■■□□□ 1.8
LIME1-204ENST00000476183 AOX1Q06278 1338 aa26.32■■□□□ 1.8
LIME1-204ENST00000476183 GRM1Q13255 1194 aa26.31■■□□□ 1.8
LIME1-204ENST00000476183 PRAMEF18Q5VWM3 479 aa26.31■■□□□ 1.8
LIME1-204ENST00000476183 THSD7BQ9C0I4 1608 aa26.3■■□□□ 1.8
LIME1-204ENST00000476183 ZBTB7BO15156 539 aaPredicted RBP26.3■■□□□ 1.8
LIME1-204ENST00000476183 FRAT2O75474 233 aaPredicted RBP26.3■■□□□ 1.8
LIME1-204ENST00000476183 HUNKP57058 714 aa26.3■■□□□ 1.8
LIME1-204ENST00000476183 PANK1Q8TE04 598 aa26.3■■□□□ 1.8
LIME1-204ENST00000476183 PRMT6Q96LA8 375 aaPredicted RBP26.3■■□□□ 1.8
LIME1-204ENST00000476183 C1orf115Q9H7X2 142 aa26.3■■□□□ 1.8
LIME1-204ENST00000476183 TTF2Q9UNY4 1162 aaKnown RBP26.3■■□□□ 1.8
LIME1-204ENST00000476183 SPDYE2BA6NHP3 402 aa26.29■■□□□ 1.8
LIME1-204ENST00000476183 SPDYE6P0CI01 402 aa26.29■■□□□ 1.8
LIME1-204ENST00000476183 ECE1P42892 770 aa26.29■■□□□ 1.8
LIME1-204ENST00000476183 C2orf69Q8N8R5 385 aa26.29■■□□□ 1.8
LIME1-204ENST00000476183 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.29■■□□□ 1.8
LIME1-204ENST00000476183 ECM29Q5VYK3 1845 aa26.29■■□□□ 1.8
LIME1-204ENST00000476183 COL1A1P02452 1464 aaPredicted RBP26.28■■□□□ 1.8
LIME1-204ENST00000476183 AOC2O75106 756 aa26.27■■□□□ 1.8
LIME1-204ENST00000476183 ADORA1P30542 326 aa26.27■■□□□ 1.8
LIME1-204ENST00000476183 TFCP2Q12800 502 aa26.27■■□□□ 1.8
LIME1-204ENST00000476183 APOBEC3FQ8IUX4 373 aaKnown RBP26.27■■□□□ 1.8
LIME1-204ENST00000476183 TBC1D22AQ8WUA7 517 aa26.27■■□□□ 1.8
LIME1-204ENST00000476183 MYH13Q9UKX3 1938 aa26.27■■□□□ 1.8
LIME1-204ENST00000476183 CLRN2A0PK11 232 aa26.26■■□□□ 1.79
LIME1-204ENST00000476183 RBM5P52756 815 aaKnown RBP eCLIP26.26■■□□□ 1.79
LIME1-204ENST00000476183 POLA2Q14181 598 aa26.26■■□□□ 1.79
LIME1-204ENST00000476183 WBP1LQ9NX94 342 aa26.26■■□□□ 1.79
LIME1-204ENST00000476183 SERPINA10Q9UK55 444 aa26.26■■□□□ 1.79
LIME1-204ENST00000476183 TIMM10P62072 90 aa26.25■■□□□ 1.79
LIME1-204ENST00000476183 RCAN3Q9UKA8 241 aa26.25■■□□□ 1.79
LIME1-204ENST00000476183 PHKA1P46020 1223 aa26.24■■□□□ 1.79
LIME1-204ENST00000476183 ATP8B2P98198 1209 aa26.24■■□□□ 1.79
LIME1-204ENST00000476183 MOB2Q70IA6 237 aa26.24■■□□□ 1.79
LIME1-204ENST00000476183 PAPPA2Q9BXP8 1791 aa26.24■■□□□ 1.79
LIME1-204ENST00000476183 FOXN1O15353 648 aa26.23■■□□□ 1.79
LIME1-204ENST00000476183 CRKP46108 304 aa26.23■■□□□ 1.79
LIME1-204ENST00000476183 RGMBQ6NW40 437 aa26.23■■□□□ 1.79
LIME1-204ENST00000476183 SSH3Q8TE77 659 aa26.23■■□□□ 1.79
LIME1-204ENST00000476183 A0A1B0GUL7 405 aa26.22■■□□□ 1.79
LIME1-204ENST00000476183 MYO1BO43795 1136 aa26.22■■□□□ 1.79
LIME1-204ENST00000476183 ZIC5Q96T25 663 aa26.22■■□□□ 1.79
LIME1-204ENST00000476183 DEFB129Q9H1M3 183 aa26.22■■□□□ 1.79
LIME1-204ENST00000476183 FAM155AB1AL88 458 aaPredicted RBP26.21■■□□□ 1.79
LIME1-204ENST00000476183 MAP2K2P36507 400 aa26.21■■□□□ 1.79
LIME1-204ENST00000476183 FKBP1BP68106 108 aa26.21■■□□□ 1.79
LIME1-204ENST00000476183 G3BP1Q13283 466 aaKnown RBP eCLIP26.21■■□□□ 1.79
LIME1-204ENST00000476183 CCDC102BQ68D86 513 aa26.21■■□□□ 1.79
LIME1-204ENST00000476183 VEZTQ9HBM0 779 aa26.21■■□□□ 1.79
LIME1-204ENST00000476183 AKAP2Q9Y2D5 859 aa26.21■■□□□ 1.79
LIME1-204ENST00000476183 HDLBPQ00341 1268 aaKnown RBP26.2■■□□□ 1.78
LIME1-204ENST00000476183 MAP2K1Q02750 393 aaPredicted RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms