RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 DRC7Q8IY82 874 aa15.17■□□□□ 0.02
CCNL1-216ENST00000475298 BRF1Q92994 677 aa15.17■□□□□ 0.02
CCNL1-216ENST00000475298 DDX11Q96FC9 970 aa15.17■□□□□ 0.02
CCNL1-216ENST00000475298 RASSF4Q9H2L5 321 aa15.17■□□□□ 0.02
CCNL1-216ENST00000475298 SH3TC1Q8TE82 1336 aa15.16■□□□□ 0.02
CCNL1-216ENST00000475298 ZNF335Q9H4Z2 1342 aaPredicted RBP15.16■□□□□ 0.02
CCNL1-216ENST00000475298 DHX16O60231 1041 aaKnown RBP15.16■□□□□ 0.02
CCNL1-216ENST00000475298 EVA1CP58658 441 aa15.16■□□□□ 0.02
CCNL1-216ENST00000475298 SYT10Q6XYQ8 523 aa15.16■□□□□ 0.02
CCNL1-216ENST00000475298 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.16■□□□□ 0.02
CCNL1-216ENST00000475298 TOGARAM1Q9Y4F4 1720 aa15.16■□□□□ 0.02
CCNL1-216ENST00000475298 PPFIA3O75145 1194 aa15.16■□□□□ 0.02
CCNL1-216ENST00000475298 IFIT1P09914 478 aaKnown RBP15.16■□□□□ 0.02
CCNL1-216ENST00000475298 TNNT3P45378 269 aaPredicted RBP15.16■□□□□ 0.02
CCNL1-216ENST00000475298 KRT85P78386 507 aa15.16■□□□□ 0.02
CCNL1-216ENST00000475298 TYRO3Q06418 890 aa15.16■□□□□ 0.02
CCNL1-216ENST00000475298 CBX8Q9HC52 389 aa15.16■□□□□ 0.02
CCNL1-216ENST00000475298 ASAP1Q9ULH1 1129 aa15.16■□□□□ 0.02
CCNL1-216ENST00000475298 PALLDQ8WX93 1383 aa15.15■□□□□ 0.02
CCNL1-216ENST00000475298 LIG1P18858 919 aa15.15■□□□□ 0.02
CCNL1-216ENST00000475298 PDCP20941 246 aa15.15■□□□□ 0.02
CCNL1-216ENST00000475298 ADORA1P30542 326 aa15.15■□□□□ 0.02
CCNL1-216ENST00000475298 FOSBP53539 338 aa15.15■□□□□ 0.02
CCNL1-216ENST00000475298 TNS2Q63HR2 1409 aa15.15■□□□□ 0.02
CCNL1-216ENST00000475298 DNAJC10Q8IXB1 793 aa15.15■□□□□ 0.02
CCNL1-216ENST00000475298 SYNE4Q8N205 404 aa15.15■□□□□ 0.02
CCNL1-216ENST00000475298 FAM89AQ96GI7 184 aa15.15■□□□□ 0.02
CCNL1-216ENST00000475298 LAMA4Q16363 1823 aa15.15■□□□□ 0.02
CCNL1-216ENST00000475298 TRIM66O15016 1216 aa15.14■□□□□ 0.01
CCNL1-216ENST00000475298 SLU7O95391 586 aaKnown RBP15.14■□□□□ 0.01
CCNL1-216ENST00000475298 PNMA6AP0CW24 399 aaPredicted RBP15.14■□□□□ 0.01
CCNL1-216ENST00000475298 TMOD3Q9NYL9 352 aa15.14■□□□□ 0.01
CCNL1-216ENST00000475298 LCMT1Q9UIC8 334 aa15.14■□□□□ 0.01
CCNL1-216ENST00000475298 CLCN6P51797 869 aa15.14■□□□□ 0.01
CCNL1-216ENST00000475298 FKBP4Q02790 459 aaKnown RBP eCLIP15.14■□□□□ 0.01
CCNL1-216ENST00000475298 SCRN1Q12765 414 aa15.14■□□□□ 0.01
CCNL1-216ENST00000475298 PTPN14Q15678 1187 aa15.14■□□□□ 0.01
CCNL1-216ENST00000475298 CAMK4Q16566 473 aa15.14■□□□□ 0.01
CCNL1-216ENST00000475298 CHST3Q7LGC8 479 aa15.14■□□□□ 0.01
CCNL1-216ENST00000475298 ISCA1Q9BUE6 129 aa15.14■□□□□ 0.01
CCNL1-216ENST00000475298 TRIM5Q9C035 493 aa15.14■□□□□ 0.01
CCNL1-216ENST00000475298 ABCA3Q99758 1704 aa15.14■□□□□ 0.01
CCNL1-216ENST00000475298 MAST3O60307 1309 aa15.14■□□□□ 0.01
CCNL1-216ENST00000475298 NPHP1O15259 732 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 PSEN1P49768 467 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 ZMYM1Q5SVZ6 1142 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 TMX1Q9H3N1 280 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 GPR108Q9NPR9 543 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 ATG3Q9NT62 314 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 M0R2C6 588 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 HSPD1P10809 573 aaKnown RBP15.13■□□□□ 0.01
CCNL1-216ENST00000475298 GYS2P54840 703 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 APOBRQ0VD83 1088 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 TCIRG1Q13488 830 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 ARID5BQ14865 1188 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 HSP90AB3PQ58FF7 597 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 TTLL5Q6EMB2 1281 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 LRRC8AQ8IWT6 810 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 HELLSQ9NRZ9 838 aa15.13■□□□□ 0.01
CCNL1-216ENST00000475298 MYO1CO00159 1063 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 ERCC6LQ2NKX8 1250 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 CCDC57Q2TAC2 916 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 ANO6Q4KMQ2 910 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 KRBA2Q6ZNG9 492 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 LRRN4CLQ8ND94 238 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 TDRD7Q8NHU6 1098 aaKnown RBP15.12■□□□□ 0.01
CCNL1-216ENST00000475298 PIGBQ92521 554 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
CCNL1-216ENST00000475298 CEP126Q9P2H0 1117 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 CLIP2Q9UDT6 1046 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 KAT6BQ8WYB5 2073 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 ST5P78524 1137 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 SCARF1Q14162 830 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 MAP3K11Q16584 847 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 TXLNBQ8N3L3 684 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 SPATA32Q96LK8 384 aa15.12■□□□□ 0.01
CCNL1-216ENST00000475298 RNF113AO15541 343 aaKnown RBP15.11■□□□□ 0.01
CCNL1-216ENST00000475298 CIAO1O76071 339 aa15.11■□□□□ 0.01
CCNL1-216ENST00000475298 ZRANB2O95218 330 aaKnown RBP eCLIP15.11■□□□□ 0.011e-6■■□□□ 13.2
CCNL1-216ENST00000475298 GPTP24298 496 aa15.11■□□□□ 0.01
CCNL1-216ENST00000475298 CCT2P78371 535 aaKnown RBP15.11■□□□□ 0.01
CCNL1-216ENST00000475298 PI16Q6UXB8 463 aa15.11■□□□□ 0.01
CCNL1-216ENST00000475298 C10orf67Q8IYJ2 551 aa15.11■□□□□ 0.01
CCNL1-216ENST00000475298 LEO1Q8WVC0 666 aaPredicted RBP15.11■□□□□ 0.01
CCNL1-216ENST00000475298 OSBP2Q969R2 916 aa15.11■□□□□ 0.01
CCNL1-216ENST00000475298 NCOA5Q9HCD5 579 aaKnown RBP15.11■□□□□ 0.01
CCNL1-216ENST00000475298 LOC102724159A0A0B4J2E5 919 aa15.11■□□□□ 0.01
CCNL1-216ENST00000475298 E7EWF7 191 aa15.11■□□□□ 0.01
CCNL1-216ENST00000475298 CASQ1P31415 396 aa15.11■□□□□ 0.01
CCNL1-216ENST00000475298 PWP2Q15269 919 aaKnown RBP15.11■□□□□ 0.01
CCNL1-216ENST00000475298 DHX32Q7L7V1 743 aaKnown RBP15.11■□□□□ 0.01
CCNL1-216ENST00000475298 SMARCE1Q969G3 411 aa15.11■□□□□ 0.01
CCNL1-216ENST00000475298 XAGE2Q96GT9 111 aa15.11■□□□□ 0.01
CCNL1-216ENST00000475298 DSCC1Q9BVC3 393 aa15.11■□□□□ 0.01
CCNL1-216ENST00000475298 CTDNEP1O95476 244 aa15.1■□□□□ 0.01
CCNL1-216ENST00000475298 RESTQ13127 1097 aa15.1■□□□□ 0.01
CCNL1-216ENST00000475298 HLFQ16534 295 aa15.1■□□□□ 0.01
CCNL1-216ENST00000475298 GORABQ5T7V8 394 aa15.1■□□□□ 0.01
CCNL1-216ENST00000475298 UBXN6Q9BZV1 441 aa15.1■□□□□ 0.01
CCNL1-216ENST00000475298 DACT1Q9NYF0 836 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms