RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 NF2P35240 595 aa14.28□□□□□ -0.12
ACTB-209ENST00000473257 IFIT5Q13325 482 aaKnown RBP14.28□□□□□ -0.12
ACTB-209ENST00000473257 DLGAP5Q15398 846 aa14.28□□□□□ -0.12
ACTB-209ENST00000473257 DEFB129Q9H1M3 183 aa14.28□□□□□ -0.12
ACTB-209ENST00000473257 A0A1B0GUL6 1792 aa14.27□□□□□ -0.12
ACTB-209ENST00000473257 GPR25O00155 361 aa14.27□□□□□ -0.13
ACTB-209ENST00000473257 TM4SF4P48230 202 aa14.27□□□□□ -0.13
ACTB-209ENST00000473257 CFAP100Q494V2 611 aa14.27□□□□□ -0.13
ACTB-209ENST00000473257 LDLRAD1Q5T700 205 aa14.27□□□□□ -0.13
ACTB-209ENST00000473257 SPRYD7Q5W111 196 aa14.27□□□□□ -0.13
ACTB-209ENST00000473257 ARMC9Q7Z3E5 817 aa14.27□□□□□ -0.13
ACTB-209ENST00000473257 APOBEC3FQ8IUX4 373 aaKnown RBP14.27□□□□□ -0.13
ACTB-209ENST00000473257 PRMT6Q96LA8 375 aaPredicted RBP14.27□□□□□ -0.13
ACTB-209ENST00000473257 PUS3Q9BZE2 481 aaKnown RBP14.27□□□□□ -0.13
ACTB-209ENST00000473257 VEZTQ9HBM0 779 aa14.27□□□□□ -0.13
ACTB-209ENST00000473257 MKI67P46013 3256 aaKnown RBP14.27□□□□□ -0.13
ACTB-209ENST00000473257 NBPF12Q5TAG4 269 aaPredicted RBP14.26□□□□□ -0.13
ACTB-209ENST00000473257 CDAN1Q8IWY9 1227 aa14.26□□□□□ -0.13
ACTB-209ENST00000473257 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
ACTB-209ENST00000473257 GJA5P36382 358 aa14.25□□□□□ -0.13
ACTB-209ENST00000473257 GYG1P46976 350 aa14.25□□□□□ -0.13
ACTB-209ENST00000473257 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
ACTB-209ENST00000473257 SLC4A10Q6U841 1118 aa14.25□□□□□ -0.13
ACTB-209ENST00000473257 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
ACTB-209ENST00000473257 GRM8O00222 908 aa14.24□□□□□ -0.13
ACTB-209ENST00000473257 IGF2BP3O00425 579 aaKnown RBP eCLIP14.24□□□□□ -0.13
ACTB-209ENST00000473257 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
ACTB-209ENST00000473257 IL1R1P14778 569 aa14.24□□□□□ -0.13
ACTB-209ENST00000473257 RBM5P52756 815 aaKnown RBP eCLIP14.24□□□□□ -0.139e-7■■■□□ 17.1
ACTB-209ENST00000473257 GRIK5Q16478 980 aa14.24□□□□□ -0.13
ACTB-209ENST00000473257 LDHAL6AQ6ZMR3 332 aa14.24□□□□□ -0.13
ACTB-209ENST00000473257 ZNF804AQ7Z570 1209 aa14.24□□□□□ -0.13
ACTB-209ENST00000473257 WDR63Q8IWG1 891 aa14.24□□□□□ -0.13
ACTB-209ENST00000473257 SLC10A4Q96EP9 437 aa14.24□□□□□ -0.13
ACTB-209ENST00000473257 SUCLG2Q96I99 432 aa14.24□□□□□ -0.13
ACTB-209ENST00000473257 CNNM1Q9NRU3 951 aa14.24□□□□□ -0.13
ACTB-209ENST00000473257 IQSEC3Q9UPP2 1182 aaPredicted RBP14.24□□□□□ -0.13
ACTB-209ENST00000473257 SREBF2Q12772 1141 aa14.23□□□□□ -0.13
ACTB-209ENST00000473257 CCDC57Q2TAC2 916 aa14.23□□□□□ -0.13
ACTB-209ENST00000473257 C15orf52Q6ZUT6 534 aaKnown RBP14.23□□□□□ -0.13
ACTB-209ENST00000473257 FAM9BQ8IZU0 186 aa14.23□□□□□ -0.13
ACTB-209ENST00000473257 KAZALD1Q96I82 304 aa14.23□□□□□ -0.13
ACTB-209ENST00000473257 WNK4Q96J92 1243 aa14.23□□□□□ -0.13
ACTB-209ENST00000473257 FKTNO75072 461 aa14.22□□□□□ -0.13
ACTB-209ENST00000473257 CAP1Q01518 475 aa14.22□□□□□ -0.13
ACTB-209ENST00000473257 RASA3Q14644 834 aa14.22□□□□□ -0.13
ACTB-209ENST00000473257 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
ACTB-209ENST00000473257 MTMR14Q8NCE2 650 aa14.22□□□□□ -0.13
ACTB-209ENST00000473257 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
ACTB-209ENST00000473257 TDRD3Q9H7E2 651 aaKnown RBP14.22□□□□□ -0.13
ACTB-209ENST00000473257 C9orf78Q9NZ63 289 aaPredicted RBP14.22□□□□□ -0.13
ACTB-209ENST00000473257 USP2O75604 605 aaPredicted RBP14.21□□□□□ -0.13
ACTB-209ENST00000473257 NBPF7P0C2Y1 421 aaPredicted RBP14.21□□□□□ -0.13
ACTB-209ENST00000473257 BRCA2P51587 3418 aa14.21□□□□□ -0.13
ACTB-209ENST00000473257 CACNA1FO60840 1977 aa14.2□□□□□ -0.14
ACTB-209ENST00000473257 TCP10L2B9ZVM9 353 aa14.2□□□□□ -0.14
ACTB-209ENST00000473257 CACNB3P54284 484 aa14.2□□□□□ -0.14
ACTB-209ENST00000473257 CHAF1AQ13111 956 aaPredicted RBP14.2□□□□□ -0.14
ACTB-209ENST00000473257 MFSD14BQ5SR56 506 aa14.2□□□□□ -0.14
ACTB-209ENST00000473257 FBXO46Q6PJ61 603 aaPredicted RBP14.2□□□□□ -0.14
ACTB-209ENST00000473257 KLHDC4Q8TBB5 520 aa14.2□□□□□ -0.14
ACTB-209ENST00000473257 FAM84BQ96KN1 310 aaPredicted RBP14.2□□□□□ -0.14
ACTB-209ENST00000473257 PTPN18Q99952 460 aa14.2□□□□□ -0.14
ACTB-209ENST00000473257 ELP3Q9H9T3 547 aa14.2□□□□□ -0.14
ACTB-209ENST00000473257 ZNF70Q9UC06 446 aaPredicted RBP14.2□□□□□ -0.14
ACTB-209ENST00000473257 TTF2Q9UNY4 1162 aaKnown RBP14.2□□□□□ -0.14
ACTB-209ENST00000473257 MANSC4A6NHS7 340 aaPredicted RBP14.19□□□□□ -0.14
ACTB-209ENST00000473257 ANP32CO43423 234 aa14.19□□□□□ -0.14
ACTB-209ENST00000473257 MYO1BO43795 1136 aa14.19□□□□□ -0.14
ACTB-209ENST00000473257 PPP1R12BO60237 982 aaPredicted RBP14.19□□□□□ -0.14
ACTB-209ENST00000473257 HIBADHP31937 336 aaKnown RBP14.19□□□□□ -0.14
ACTB-209ENST00000473257 MMP14P50281 582 aa14.19□□□□□ -0.14
ACTB-209ENST00000473257 PKN2Q16513 984 aaKnown RBP14.19□□□□□ -0.14
ACTB-209ENST00000473257 MAP3K11Q16584 847 aa14.19□□□□□ -0.14
ACTB-209ENST00000473257 LRRC24Q50LG9 513 aa14.19□□□□□ -0.14
ACTB-209ENST00000473257 TDRD7Q8NHU6 1098 aaKnown RBP14.19□□□□□ -0.14
ACTB-209ENST00000473257 CD99L2Q8TCZ2 262 aa14.19□□□□□ -0.14
ACTB-209ENST00000473257 SRCIN1Q9C0H9 1055 aa14.19□□□□□ -0.14
ACTB-209ENST00000473257 TMEM39BQ9GZU3 492 aa14.19□□□□□ -0.14
ACTB-209ENST00000473257 BICC1Q9H694 974 aaKnown RBP14.19□□□□□ -0.14
ACTB-209ENST00000473257 TRIM17Q9Y577 477 aa14.19□□□□□ -0.14
ACTB-209ENST00000473257 ECM29Q5VYK3 1845 aa14.19□□□□□ -0.14
ACTB-209ENST00000473257 COL1A1P02452 1464 aaPredicted RBP14.18□□□□□ -0.14
ACTB-209ENST00000473257 FAM205AQ6ZU69 1335 aa14.18□□□□□ -0.14
ACTB-209ENST00000473257 CRHR2Q13324 411 aa14.18□□□□□ -0.14
ACTB-209ENST00000473257 SUPT20HL1Q3ZLR7 823 aa14.18□□□□□ -0.14
ACTB-209ENST00000473257 SPDYE2Q495Y8 402 aa14.18□□□□□ -0.14
ACTB-209ENST00000473257 OTOP1Q7RTM1 612 aa14.18□□□□□ -0.14
ACTB-209ENST00000473257 OTOFQ9HC10 1997 aa14.18□□□□□ -0.14
ACTB-209ENST00000473257 KIAA0100Q14667 2235 aaKnown RBP14.17□□□□□ -0.14
ACTB-209ENST00000473257 POTEFA5A3E0 1075 aa14.17□□□□□ -0.14
ACTB-209ENST00000473257 ALDH1L1O75891 902 aa14.17□□□□□ -0.14
ACTB-209ENST00000473257 CRKP46108 304 aa14.17□□□□□ -0.14
ACTB-209ENST00000473257 FKBP1AP62942 108 aaKnown RBP14.17□□□□□ -0.14
ACTB-209ENST00000473257 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
ACTB-209ENST00000473257 DZIP1LQ8IYY4 767 aaKnown RBP14.17□□□□□ -0.14
ACTB-209ENST00000473257 ANKRD44Q8N8A2 993 aa14.17□□□□□ -0.14
ACTB-209ENST00000473257 TEPSINQ96N21 525 aa14.17□□□□□ -0.14
ACTB-209ENST00000473257 CFHR5Q9BXR6 569 aa14.17□□□□□ -0.14
ACTB-209ENST00000473257 RIPOR2Q9Y4F9 1068 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms