RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 CTCFP49711 727 aaPredicted RBP26.27■■□□□ 1.8
SREBF1-210ENST00000471445 C2orf69Q8N8R5 385 aa26.27■■□□□ 1.8
SREBF1-210ENST00000471445 ARHGAP45Q92619 1136 aa26.27■■□□□ 1.8
SREBF1-210ENST00000471445 FAM205AQ6ZU69 1335 aa26.26■■□□□ 1.79
SREBF1-210ENST00000471445 AOC2O75106 756 aa26.26■■□□□ 1.79
SREBF1-210ENST00000471445 METTL24Q5JXM2 366 aa26.26■■□□□ 1.79
SREBF1-210ENST00000471445 TDRD7Q8NHU6 1098 aaKnown RBP26.26■■□□□ 1.79
SREBF1-210ENST00000471445 FAM84BQ96KN1 310 aaPredicted RBP26.26■■□□□ 1.79
SREBF1-210ENST00000471445 GYG1P46976 350 aa26.25■■□□□ 1.79
SREBF1-210ENST00000471445 HNRNPUQ00839 825 aaKnown RBP eCLIP26.25■■□□□ 1.79
SREBF1-210ENST00000471445 COL1A1P02452 1464 aaPredicted RBP26.24■■□□□ 1.79
SREBF1-210ENST00000471445 PDE8BO95263 885 aa26.24■■□□□ 1.79
SREBF1-210ENST00000471445 HIBADHP31937 336 aaKnown RBP26.24■■□□□ 1.79
SREBF1-210ENST00000471445 PRDM10Q9NQV6 1147 aa26.24■■□□□ 1.79
SREBF1-210ENST00000471445 SCAF8Q9UPN6 1271 aaKnown RBP26.24■■□□□ 1.79
SREBF1-210ENST00000471445 JAG2Q9Y219 1238 aa26.24■■□□□ 1.79
SREBF1-210ENST00000471445 HSPA8P11142 646 aaKnown RBP26.23■■□□□ 1.79
SREBF1-210ENST00000471445 PTPN12Q05209 780 aaKnown RBP26.23■■□□□ 1.79
SREBF1-210ENST00000471445 RGMBQ6NW40 437 aa26.23■■□□□ 1.79
SREBF1-210ENST00000471445 MTMR14Q8NCE2 650 aa26.23■■□□□ 1.79
SREBF1-210ENST00000471445 EYA2O00167 538 aa26.22■■□□□ 1.79
SREBF1-210ENST00000471445 INTS3Q68E01 1043 aaKnown RBP26.22■■□□□ 1.79
SREBF1-210ENST00000471445 APOBEC3FQ8IUX4 373 aaKnown RBP26.22■■□□□ 1.79
SREBF1-210ENST00000471445 MEIS3Q99687 375 aa26.22■■□□□ 1.79
SREBF1-210ENST00000471445 FAM155AB1AL88 458 aaPredicted RBP26.21■■□□□ 1.79
SREBF1-210ENST00000471445 FKBP1BP68106 108 aa26.21■■□□□ 1.79
SREBF1-210ENST00000471445 NOGQ13253 232 aa26.21■■□□□ 1.79
SREBF1-210ENST00000471445 FBXO33Q7Z6M2 555 aa26.21■■□□□ 1.79
SREBF1-210ENST00000471445 LRRFIP2Q9Y608 721 aaKnown RBP26.21■■□□□ 1.79
SREBF1-210ENST00000471445 F8W031 263 aaPredicted RBP26.2■■□□□ 1.78
SREBF1-210ENST00000471445 FGFR2P21802 821 aa26.2■■□□□ 1.78
SREBF1-210ENST00000471445 DLGAP5Q15398 846 aa26.2■■□□□ 1.78
SREBF1-210ENST00000471445 TRIM27P14373 513 aa26.19■■□□□ 1.78
SREBF1-210ENST00000471445 LBX1P52954 281 aa26.19■■□□□ 1.78
SREBF1-210ENST00000471445 PUM3Q15397 648 aaKnown RBP26.19■■□□□ 1.78
SREBF1-210ENST00000471445 MFSD14BQ5SR56 506 aa26.19■■□□□ 1.78
SREBF1-210ENST00000471445 FBXO3Q9UK99 471 aa26.19■■□□□ 1.78
SREBF1-210ENST00000471445 HDAC5Q9UQL6 1122 aa26.19■■□□□ 1.78
SREBF1-210ENST00000471445 PCDHAC2Q9Y5I4 1007 aa26.19■■□□□ 1.78
SREBF1-210ENST00000471445 BCAR3O75815 825 aa26.18■■□□□ 1.78
SREBF1-210ENST00000471445 CFAP100Q494V2 611 aa26.18■■□□□ 1.78
SREBF1-210ENST00000471445 ATG9AQ7Z3C6 839 aa26.18■■□□□ 1.78
SREBF1-210ENST00000471445 ZIC5Q96T25 663 aa26.18■■□□□ 1.78
SREBF1-210ENST00000471445 BEGAINQ9BUH8 593 aa26.18■■□□□ 1.78
SREBF1-210ENST00000471445 SPDYE2BA6NHP3 402 aa26.17■■□□□ 1.78
SREBF1-210ENST00000471445 IPO8O15397 1037 aaKnown RBP26.17■■□□□ 1.78
SREBF1-210ENST00000471445 SLC10A3P09131 477 aa26.17■■□□□ 1.78
SREBF1-210ENST00000471445 SPDYE6P0CI01 402 aa26.17■■□□□ 1.78
SREBF1-210ENST00000471445 CAVIN4Q5BKX8 364 aa26.17■■□□□ 1.78
SREBF1-210ENST00000471445 PRAMEF18Q5VWM3 479 aa26.17■■□□□ 1.78
SREBF1-210ENST00000471445 ATF7IPQ6VMQ6 1270 aa26.17■■□□□ 1.78
SREBF1-210ENST00000471445 CCDC102AQ96A19 550 aa26.17■■□□□ 1.78
SREBF1-210ENST00000471445 AKAP11Q9UKA4 1901 aa26.16■■□□□ 1.78
SREBF1-210ENST00000471445 CIAO1O76071 339 aa26.16■■□□□ 1.78
SREBF1-210ENST00000471445 ZNF157P51786 506 aaPredicted RBP26.16■■□□□ 1.78
SREBF1-210ENST00000471445 VPS37DQ86XT2 251 aa26.16■■□□□ 1.78
SREBF1-210ENST00000471445 TNNQ9UQP3 1299 aa26.16■■□□□ 1.78
SREBF1-210ENST00000471445 ZBED9Q6R2W3 1325 aa26.15■■□□□ 1.78
SREBF1-210ENST00000471445 CAPN15O75808 1086 aa26.15■■□□□ 1.78
SREBF1-210ENST00000471445 IFIT1P09914 478 aaKnown RBP26.15■■□□□ 1.78
SREBF1-210ENST00000471445 IQSEC3Q9UPP2 1182 aaPredicted RBP26.15■■□□□ 1.78
SREBF1-210ENST00000471445 CA12O43570 354 aa26.14■■□□□ 1.78
SREBF1-210ENST00000471445 GNAI3P08754 354 aa26.14■■□□□ 1.78
SREBF1-210ENST00000471445 RASAL3Q86YV0 1011 aa26.14■■□□□ 1.78
SREBF1-210ENST00000471445 TTF2Q9UNY4 1162 aaKnown RBP26.14■■□□□ 1.78
SREBF1-210ENST00000471445 SSC5DA1L4H1 1573 aa26.14■■□□□ 1.78
SREBF1-210ENST00000471445 AOX1Q06278 1338 aa26.14■■□□□ 1.77
SREBF1-210ENST00000471445 SLC5A1P13866 664 aa26.13■■□□□ 1.77
SREBF1-210ENST00000471445 NF2P35240 595 aa26.13■■□□□ 1.77
SREBF1-210ENST00000471445 BCAMP50895 628 aa26.13■■□□□ 1.77
SREBF1-210ENST00000471445 MOB2Q70IA6 237 aa26.13■■□□□ 1.77
SREBF1-210ENST00000471445 LPIN2Q92539 896 aa26.13■■□□□ 1.77
SREBF1-210ENST00000471445 FRAT1Q92837 279 aaPredicted RBP26.13■■□□□ 1.77
SREBF1-210ENST00000471445 PRMT6Q96LA8 375 aaPredicted RBP26.13■■□□□ 1.77
SREBF1-210ENST00000471445 SIL1Q9H173 461 aa26.13■■□□□ 1.77
SREBF1-210ENST00000471445 COPRSQ9NQ92 184 aa26.13■■□□□ 1.77
SREBF1-210ENST00000471445 MYO1BO43795 1136 aa26.12■■□□□ 1.77
SREBF1-210ENST00000471445 MTX1Q13505 466 aa26.12■■□□□ 1.77
SREBF1-210ENST00000471445 TBC1D22AQ8WUA7 517 aa26.12■■□□□ 1.77
SREBF1-210ENST00000471445 SERPINA10Q9UK55 444 aa26.12■■□□□ 1.77
SREBF1-210ENST00000471445 PPP2R3BQ9Y5P8 575 aa26.12■■□□□ 1.77
SREBF1-210ENST00000471445 LAMB1P07942 1786 aa26.11■■□□□ 1.77
SREBF1-210ENST00000471445 CLRN2A0PK11 232 aa26.11■■□□□ 1.77
SREBF1-210ENST00000471445 CHAF1AQ13111 956 aaPredicted RBP26.11■■□□□ 1.77
SREBF1-210ENST00000471445 DEFB129Q9H1M3 183 aa26.11■■□□□ 1.77
SREBF1-210ENST00000471445 PA2G4Q9UQ80 394 aaKnown RBP26.11■■□□□ 1.77
SREBF1-210ENST00000471445 IL15P40933 162 aaPredicted RBP26.1■■□□□ 1.77
SREBF1-210ENST00000471445 RBM5P52756 815 aaKnown RBP eCLIP26.1■■□□□ 1.772e-6■□□□□ 9.6
SREBF1-210ENST00000471445 KIF23Q02241 960 aaPredicted RBP26.1■■□□□ 1.77
SREBF1-210ENST00000471445 GRIK5Q16478 980 aa26.1■■□□□ 1.77
SREBF1-210ENST00000471445 TSKSQ9UJT2 592 aa26.1■■□□□ 1.77
SREBF1-210ENST00000471445 UBE2Q2LH0YL09 131 aa26.09■■□□□ 1.77
SREBF1-210ENST00000471445 FRAT2O75474 233 aaPredicted RBP26.09■■□□□ 1.77
SREBF1-210ENST00000471445 SPDYE2Q495Y8 402 aa26.09■■□□□ 1.77
SREBF1-210ENST00000471445 ZKSCAN2Q63HK3 967 aa26.09■■□□□ 1.77
SREBF1-210ENST00000471445 CLUAP1Q96AJ1 413 aa26.09■■□□□ 1.77
SREBF1-210ENST00000471445 OTOFQ9HC10 1997 aa26.09■■□□□ 1.77
SREBF1-210ENST00000471445 CRKP46108 304 aa26.08■■□□□ 1.77
SREBF1-210ENST00000471445 TTLL12Q14166 644 aaPredicted RBP26.08■■□□□ 1.77
SREBF1-210ENST00000471445 ATP2B3Q16720 1220 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms