RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 ZNF598Q86UK7 904 aaKnown RBP7□□□□□ -1.29
HDAC8-216ENST00000470998 DNAJC10Q8IXB1 793 aa7□□□□□ -1.29
HDAC8-216ENST00000470998 ANKRD44Q8N8A2 993 aa7□□□□□ -1.29
HDAC8-216ENST00000470998 GNL3Q9BVP2 549 aaKnown RBP eCLIP7□□□□□ -1.29
HDAC8-216ENST00000470998 NARFQ9UHQ1 456 aa7□□□□□ -1.29
HDAC8-216ENST00000470998 TM4SF1P30408 202 aa6.99□□□□□ -1.29
HDAC8-216ENST00000470998 SLC39A6Q13433 755 aa6.99□□□□□ -1.29
HDAC8-216ENST00000470998 USPL1Q5W0Q7 1092 aa6.99□□□□□ -1.29
HDAC8-216ENST00000470998 ZNF790Q6PG37 636 aa6.99□□□□□ -1.29
HDAC8-216ENST00000470998 LYPD8Q6UX82 237 aa6.99□□□□□ -1.29
HDAC8-216ENST00000470998 IL17REQ8NFR9 667 aa6.99□□□□□ -1.29
HDAC8-216ENST00000470998 DCTPP1Q9H773 170 aa6.99□□□□□ -1.29
HDAC8-216ENST00000470998 PIM2Q9P1W9 311 aa6.99□□□□□ -1.29
HDAC8-216ENST00000470998 BCS1LQ9Y276 419 aa6.99□□□□□ -1.29
HDAC8-216ENST00000470998 VIRMAQ69YN4 1812 aaKnown RBP6.99□□□□□ -1.29
HDAC8-216ENST00000470998 COL5A3P25940 1745 aaPredicted RBP6.98□□□□□ -1.29
HDAC8-216ENST00000470998 COL15A1P39059 1388 aa6.98□□□□□ -1.29
HDAC8-216ENST00000470998 HEG1Q9ULI3 1381 aa6.98□□□□□ -1.29
HDAC8-216ENST00000470998 ADAMTS7Q9UKP4 1686 aa6.98□□□□□ -1.29
HDAC8-216ENST00000470998 A0A0G2JLW4 131 aa6.98□□□□□ -1.29
HDAC8-216ENST00000470998 POLRMTO00411 1230 aaKnown RBP6.98□□□□□ -1.29
HDAC8-216ENST00000470998 DPEP1P16444 411 aa6.98□□□□□ -1.29
HDAC8-216ENST00000470998 IL6STP40189 918 aaPredicted RBP6.98□□□□□ -1.29
HDAC8-216ENST00000470998 EIF5P55010 431 aaKnown RBP6.98□□□□□ -1.29
HDAC8-216ENST00000470998 KCNH2Q12809 1159 aa6.98□□□□□ -1.29
HDAC8-216ENST00000470998 FOXC1Q12948 553 aa6.98□□□□□ -1.29
HDAC8-216ENST00000470998 FLIIQ13045 1269 aa6.98□□□□□ -1.29
HDAC8-216ENST00000470998 CEP85Q6P2H3 762 aa6.98□□□□□ -1.29
HDAC8-216ENST00000470998 CASC1Q6TDU7 716 aa6.98□□□□□ -1.29
HDAC8-216ENST00000470998 FMNL2Q96PY5 1086 aa6.98□□□□□ -1.29
HDAC8-216ENST00000470998 EVA1BQ9NVM1 165 aa6.98□□□□□ -1.29
HDAC8-216ENST00000470998 SRP68Q9UHB9 627 aaKnown RBP6.98□□□□□ -1.29
HDAC8-216ENST00000470998 ZBTB1Q9Y2K1 713 aa6.98□□□□□ -1.29
HDAC8-216ENST00000470998 SCN11AQ9UI33 1791 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 KCPQ6ZWJ8 1503 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 BTBD11A6QL63 1104 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 ELL2O00472 640 aaPredicted RBP6.97□□□□□ -1.29
HDAC8-216ENST00000470998 EPB41L2O43491 1005 aaKnown RBP6.97□□□□□ -1.29
HDAC8-216ENST00000470998 GNAI2P04899 355 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 C4AP0C0L4 1744 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 KCNA3P22001 575 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 RFC5P40937 340 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 RBM25P49756 843 aaKnown RBP6.97□□□□□ -1.29
HDAC8-216ENST00000470998 DDR1Q08345 913 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 LAPTM4AQ15012 233 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 DALRD3Q5D0E6 543 aaKnown RBP6.97□□□□□ -1.29
HDAC8-216ENST00000470998 HDGFL1Q5TGJ6 251 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 PPP2R2DQ66LE6 453 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 UNC93B1Q9H1C4 597 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 DLG5Q8TDM6 1919 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 AOX1Q06278 1338 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 KIF13BQ9NQT8 1826 aa6.97□□□□□ -1.29
HDAC8-216ENST00000470998 CDC45O75419 566 aa6.96□□□□□ -1.3
HDAC8-216ENST00000470998 SERPINB2P05120 415 aa6.96□□□□□ -1.3
HDAC8-216ENST00000470998 EIF4A1P60842 406 aaKnown RBP6.96□□□□□ -1.3
HDAC8-216ENST00000470998 FKBP5Q13451 457 aaPredicted RBP6.96□□□□□ -1.3
HDAC8-216ENST00000470998 NFIXQ14938 502 aa6.96□□□□□ -1.3
HDAC8-216ENST00000470998 HSP90AB4PQ58FF6 505 aa6.96□□□□□ -1.3
HDAC8-216ENST00000470998 ANKRD45Q5TZF3 282 aa6.96□□□□□ -1.3
HDAC8-216ENST00000470998 ARHGAP27Q6ZUM4 889 aa6.96□□□□□ -1.3
HDAC8-216ENST00000470998 PNMA1Q8ND90 353 aa6.96□□□□□ -1.3
HDAC8-216ENST00000470998 ARMC2Q8NEN0 867 aa6.96□□□□□ -1.3
HDAC8-216ENST00000470998 EMID1Q96A84 441 aaPredicted RBP6.96□□□□□ -1.3
HDAC8-216ENST00000470998 ZNF496Q96IT1 587 aaPredicted RBP6.96□□□□□ -1.3
HDAC8-216ENST00000470998 SRCIN1Q9C0H9 1055 aa6.96□□□□□ -1.3
HDAC8-216ENST00000470998 OSBPL3Q9H4L5 887 aa6.96□□□□□ -1.3
HDAC8-216ENST00000470998 MAP10Q9P2G4 905 aa6.96□□□□□ -1.3
HDAC8-216ENST00000470998 DBF4Q9UBU7 674 aaPredicted RBP6.96□□□□□ -1.3
HDAC8-216ENST00000470998 TJP1Q07157 1748 aa6.96□□□□□ -1.3
HDAC8-216ENST00000470998 TNFRSF10AO00220 468 aa6.95□□□□□ -1.3
HDAC8-216ENST00000470998 GFRA3O60609 400 aa6.95□□□□□ -1.3
HDAC8-216ENST00000470998 ALDH1L1O75891 902 aa6.95□□□□□ -1.3
HDAC8-216ENST00000470998 DDX58O95786 925 aaKnown RBP6.95□□□□□ -1.3
HDAC8-216ENST00000470998 SNRPA1P09661 255 aaKnown RBP6.95□□□□□ -1.3
HDAC8-216ENST00000470998 WNT7BP56706 349 aa6.95□□□□□ -1.3
HDAC8-216ENST00000470998 CTDSPL2Q05D32 466 aa6.95□□□□□ -1.3
HDAC8-216ENST00000470998 LINC01559Q495D7 138 aa6.95□□□□□ -1.3
HDAC8-216ENST00000470998 TMEM259Q4ZIN3 620 aa6.95□□□□□ -1.3
HDAC8-216ENST00000470998 CLEC4GQ6UXB4 293 aa6.95□□□□□ -1.3
HDAC8-216ENST00000470998 SIRT2Q8IXJ6 389 aa6.95□□□□□ -1.3
HDAC8-216ENST00000470998 C22orf23Q9BZE7 217 aa6.95□□□□□ -1.3
HDAC8-216ENST00000470998 LNPKQ9C0E8 428 aa6.95□□□□□ -1.3
HDAC8-216ENST00000470998 ZC3H4Q9UPT8 1303 aaKnown RBP6.95□□□□□ -1.3
HDAC8-216ENST00000470998 MYH14Q7Z406 1995 aaKnown RBP6.95□□□□□ -1.3
HDAC8-216ENST00000470998 H0YIN7 160 aa6.94□□□□□ -1.3
HDAC8-216ENST00000470998 RAB11FIP3O75154 756 aa6.94□□□□□ -1.3
HDAC8-216ENST00000470998 USP17L8P0C7I0 530 aa6.94□□□□□ -1.3
HDAC8-216ENST00000470998 PDE6BP35913 854 aa6.94□□□□□ -1.3
HDAC8-216ENST00000470998 AGERQ15109 404 aa6.94□□□□□ -1.3
HDAC8-216ENST00000470998 SKAP1Q86WV1 359 aa6.94□□□□□ -1.3
HDAC8-216ENST00000470998 SNX21Q969T3 373 aa6.94□□□□□ -1.3
HDAC8-216ENST00000470998 BRIP1Q9BX63 1249 aa6.94□□□□□ -1.3
HDAC8-216ENST00000470998 HYPKQ9NX55 129 aa6.94□□□□□ -1.3
HDAC8-216ENST00000470998 WWC3Q9ULE0 1092 aa6.94□□□□□ -1.3
HDAC8-216ENST00000470998 N4BP2Q86UW6 1770 aaPredicted RBP6.94□□□□□ -1.3
HDAC8-216ENST00000470998 ERBB4Q15303 1308 aa6.94□□□□□ -1.3
HDAC8-216ENST00000470998 CARMIL3Q8ND23 1372 aa6.94□□□□□ -1.3
HDAC8-216ENST00000470998 TOMM70O94826 608 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 REC8O95072 547 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 F12P00748 615 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms