RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 SRGAP3O43295 1099 aa18.9■□□□□ 0.62
ATG4B-215ENST00000468018 IL15P40933 162 aaPredicted RBP18.9■□□□□ 0.62
ATG4B-215ENST00000468018 KIAA0825Q8IV33 1275 aa18.9■□□□□ 0.62
ATG4B-215ENST00000468018 OGFOD1Q8N543 542 aa18.9■□□□□ 0.62
ATG4B-215ENST00000468018 LPIN2Q92539 896 aa18.9■□□□□ 0.62
ATG4B-215ENST00000468018 NBPF9Q3BBW0 867 aa18.89■□□□□ 0.61
ATG4B-215ENST00000468018 KRT26Q7Z3Y9 468 aa18.89■□□□□ 0.61
ATG4B-215ENST00000468018 USP48Q86UV5 1035 aa18.89■□□□□ 0.61
ATG4B-215ENST00000468018 FTSJ3Q8IY81 847 aaKnown RBP18.89■□□□□ 0.61
ATG4B-215ENST00000468018 MTMR14Q8NCE2 650 aa18.89■□□□□ 0.61
ATG4B-215ENST00000468018 DCPSQ96C86 337 aaKnown RBP18.89■□□□□ 0.61
ATG4B-215ENST00000468018 SIL1Q9H173 461 aa18.89■□□□□ 0.61
ATG4B-215ENST00000468018 TLL2Q9Y6L7 1015 aa18.89■□□□□ 0.61
ATG4B-215ENST00000468018 PNMA6EA0A0J9YXQ4 647 aa18.88■□□□□ 0.61
ATG4B-215ENST00000468018 IFIT1P09914 478 aaKnown RBP18.88■□□□□ 0.61
ATG4B-215ENST00000468018 ANGEL2Q5VTE6 544 aaKnown RBP18.88■□□□□ 0.61
ATG4B-215ENST00000468018 DLK2Q6UY11 383 aa18.88■□□□□ 0.61
ATG4B-215ENST00000468018 MKRN1Q9UHC7 482 aaKnown RBP18.88■□□□□ 0.61
ATG4B-215ENST00000468018 HDAC9Q9UKV0 1011 aa18.88■□□□□ 0.61
ATG4B-215ENST00000468018 ADM5C9JUS6 153 aa18.87■□□□□ 0.61
ATG4B-215ENST00000468018 CELF2O95319 508 aaKnown RBP18.87■□□□□ 0.61
ATG4B-215ENST00000468018 COL1A1P02452 1464 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-215ENST00000468018 BCAMP50895 628 aa18.87■□□□□ 0.61
ATG4B-215ENST00000468018 POLA2Q14181 598 aa18.87■□□□□ 0.61
ATG4B-215ENST00000468018 CAVIN4Q5BKX8 364 aa18.87■□□□□ 0.61
ATG4B-215ENST00000468018 JAG2Q9Y219 1238 aa18.87■□□□□ 0.61
ATG4B-215ENST00000468018 SLC5A1P13866 664 aa18.86■□□□□ 0.61
ATG4B-215ENST00000468018 MFSD14BQ5SR56 506 aa18.86■□□□□ 0.61
ATG4B-215ENST00000468018 SAPCD2Q86UD0 394 aa18.86■□□□□ 0.61
ATG4B-215ENST00000468018 ITPRIPQ8IWB1 547 aa18.86■□□□□ 0.61
ATG4B-215ENST00000468018 HHIPL1Q96JK4 782 aa18.86■□□□□ 0.61
ATG4B-215ENST00000468018 CEP126Q9P2H0 1117 aa18.86■□□□□ 0.61
ATG4B-215ENST00000468018 RCAN3Q9UKA8 241 aa18.86■□□□□ 0.61
ATG4B-215ENST00000468018 VEGFBP49765 207 aa18.85■□□□□ 0.61
ATG4B-215ENST00000468018 ATP2B3Q16720 1220 aa18.85■□□□□ 0.61
ATG4B-215ENST00000468018 DEFB115Q30KQ5 88 aa18.85■□□□□ 0.61
ATG4B-215ENST00000468018 SULF1Q8IWU6 871 aa18.85■□□□□ 0.61
ATG4B-215ENST00000468018 PANK1Q8TE04 598 aa18.85■□□□□ 0.61
ATG4B-215ENST00000468018 SSH3Q8TE77 659 aa18.85■□□□□ 0.61
ATG4B-215ENST00000468018 PAPPA2Q9BXP8 1791 aa18.85■□□□□ 0.61
ATG4B-215ENST00000468018 ATP8B2P98198 1209 aa18.84■□□□□ 0.61
ATG4B-215ENST00000468018 VPS37DQ86XT2 251 aa18.84■□□□□ 0.61
ATG4B-215ENST00000468018 ABT1Q9ULW3 272 aaKnown RBP18.84■□□□□ 0.61
ATG4B-215ENST00000468018 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.84■□□□□ 0.61
ATG4B-215ENST00000468018 MS4A1P11836 297 aa18.83■□□□□ 0.6
ATG4B-215ENST00000468018 GRIK5Q16478 980 aa18.83■□□□□ 0.6
ATG4B-215ENST00000468018 TBC1D22AQ8WUA7 517 aa18.83■□□□□ 0.6
ATG4B-215ENST00000468018 CDCA5Q96FF9 252 aa18.83■□□□□ 0.6
ATG4B-215ENST00000468018 IQSEC3Q9UPP2 1182 aaPredicted RBP18.83■□□□□ 0.6
ATG4B-215ENST00000468018 PCDHAC2Q9Y5I4 1007 aa18.83■□□□□ 0.6
ATG4B-215ENST00000468018 SPDYE2BA6NHP3 402 aa18.82■□□□□ 0.6
ATG4B-215ENST00000468018 SPDYE6P0CI01 402 aa18.82■□□□□ 0.6
ATG4B-215ENST00000468018 CFAP100Q494V2 611 aa18.82■□□□□ 0.6
ATG4B-215ENST00000468018 C1orf115Q9H7X2 142 aa18.82■□□□□ 0.6
ATG4B-215ENST00000468018 SERPINA10Q9UK55 444 aa18.82■□□□□ 0.6
ATG4B-215ENST00000468018 AOX1Q06278 1338 aa18.81■□□□□ 0.6
ATG4B-215ENST00000468018 AKAP11Q9UKA4 1901 aa18.81■□□□□ 0.6
ATG4B-215ENST00000468018 F8W031 263 aaPredicted RBP18.81■□□□□ 0.6
ATG4B-215ENST00000468018 TFCP2Q12800 502 aa18.81■□□□□ 0.6
ATG4B-215ENST00000468018 MVPQ14764 893 aaKnown RBP18.81■□□□□ 0.6
ATG4B-215ENST00000468018 DLGAP5Q15398 846 aa18.81■□□□□ 0.6
ATG4B-215ENST00000468018 PRMT6Q96LA8 375 aaPredicted RBP18.81■□□□□ 0.6
ATG4B-215ENST00000468018 TTF2Q9UNY4 1162 aaKnown RBP18.81■□□□□ 0.6
ATG4B-215ENST00000468018 SUGT1Q9Y2Z0 365 aa18.81■□□□□ 0.6
ATG4B-215ENST00000468018 WDR33Q9C0J8 1336 aaKnown RBP18.8■□□□□ 0.6
ATG4B-215ENST00000468018 A0A1B0GUL7 405 aa18.8■□□□□ 0.6
ATG4B-215ENST00000468018 HDLBPQ00341 1268 aaKnown RBP18.8■□□□□ 0.6
ATG4B-215ENST00000468018 CEP85Q6P2H3 762 aa18.8■□□□□ 0.6
ATG4B-215ENST00000468018 APOBEC3FQ8IUX4 373 aaKnown RBP18.8■□□□□ 0.6
ATG4B-215ENST00000468018 MRIQ9BWK5 157 aa18.8■□□□□ 0.6
ATG4B-215ENST00000468018 ZNF408Q9H9D4 720 aa18.8■□□□□ 0.6
ATG4B-215ENST00000468018 GBA2Q9HCG7 927 aaPredicted RBP18.8■□□□□ 0.6
ATG4B-215ENST00000468018 SCAF8Q9UPN6 1271 aaKnown RBP18.8■□□□□ 0.6
ATG4B-215ENST00000468018 NOP58Q9Y2X3 529 aaKnown RBP18.8■□□□□ 0.6
ATG4B-215ENST00000468018 SALL1Q9NSC2 1324 aa18.79■□□□□ 0.6
ATG4B-215ENST00000468018 MYH2Q9UKX2 1941 aa18.79■□□□□ 0.6
ATG4B-215ENST00000468018 SEMA3EO15041 775 aa18.79■□□□□ 0.6
ATG4B-215ENST00000468018 ADORA1P30542 326 aa18.79■□□□□ 0.6
ATG4B-215ENST00000468018 PHKA1P46020 1223 aa18.79■□□□□ 0.6
ATG4B-215ENST00000468018 TIMM10P62072 90 aa18.79■□□□□ 0.6
ATG4B-215ENST00000468018 CHAF1AQ13111 956 aaPredicted RBP18.79■□□□□ 0.6
ATG4B-215ENST00000468018 CAPNS2Q96L46 248 aa18.79■□□□□ 0.6
ATG4B-215ENST00000468018 AKAP2Q9Y2D5 859 aa18.79■□□□□ 0.6
ATG4B-215ENST00000468018 PDS5AQ29RF7 1337 aaKnown RBP18.78■□□□□ 0.6
ATG4B-215ENST00000468018 CCDC102BQ68D86 513 aa18.78■□□□□ 0.6
ATG4B-215ENST00000468018 CYP4F22Q6NT55 531 aa18.78■□□□□ 0.6
ATG4B-215ENST00000468018 WDR66Q8TBY9 1149 aa18.78■□□□□ 0.6
ATG4B-215ENST00000468018 XAGE2Q96GT9 111 aa18.78■□□□□ 0.6
ATG4B-215ENST00000468018 DDX19BQ9UMR2 479 aa18.78■□□□□ 0.6
ATG4B-215ENST00000468018 LAMB1P07942 1786 aa18.78■□□□□ 0.6
ATG4B-215ENST00000468018 FRAT2O75474 233 aaPredicted RBP18.77■□□□□ 0.6
ATG4B-215ENST00000468018 HSPA1AP0DMV8 641 aaKnown RBP18.77■□□□□ 0.6
ATG4B-215ENST00000468018 HSPA1BP0DMV9 641 aaKnown RBP18.77■□□□□ 0.6
ATG4B-215ENST00000468018 ECE1P42892 770 aa18.77■□□□□ 0.6
ATG4B-215ENST00000468018 CRKP46108 304 aa18.77■□□□□ 0.6
ATG4B-215ENST00000468018 FKBP1BP68106 108 aa18.77■□□□□ 0.6
ATG4B-215ENST00000468018 G3BP1Q13283 466 aaKnown RBP eCLIP18.77■□□□□ 0.6
ATG4B-215ENST00000468018 SPDYE2Q495Y8 402 aa18.77■□□□□ 0.6
ATG4B-215ENST00000468018 GPR108Q9NPR9 543 aa18.77■□□□□ 0.6
ATG4B-215ENST00000468018 ZBTB40Q9NUA8 1239 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 340.6 ms