RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 CCDC146Q8IYE0 955 aa9.22□□□□□ -0.93
SND1-205ENST00000467238 RTKN2Q8IZC4 609 aa9.22□□□□□ -0.93
SND1-205ENST00000467238 SNIP1Q8TAD8 396 aaKnown RBP9.22□□□□□ -0.93
SND1-205ENST00000467238 ZNF277Q9NRM2 450 aaPredicted RBP9.22□□□□□ -0.93
SND1-205ENST00000467238 CHL1O00533 1208 aa9.21□□□□□ -0.94
SND1-205ENST00000467238 WNT7AO00755 349 aa9.21□□□□□ -0.94
SND1-205ENST00000467238 ANXA1P04083 346 aa9.21□□□□□ -0.94
SND1-205ENST00000467238 HOXA10P31260 410 aaPredicted RBP9.21□□□□□ -0.94
SND1-205ENST00000467238 NEUROD2Q15784 382 aa9.21□□□□□ -0.94
SND1-205ENST00000467238 RBM26Q5T8P6 1007 aaKnown RBP9.21□□□□□ -0.94
SND1-205ENST00000467238 HPS1Q92902 700 aa9.21□□□□□ -0.94
SND1-205ENST00000467238 RUNDC1Q96C34 613 aa9.21□□□□□ -0.94
SND1-205ENST00000467238 COL4A5P29400 1685 aa9.2□□□□□ -0.94
SND1-205ENST00000467238 IARSP41252 1262 aaKnown RBP9.2□□□□□ -0.94
SND1-205ENST00000467238 HIC1Q14526 733 aa9.2□□□□□ -0.94
SND1-205ENST00000467238 WDR43Q15061 677 aaKnown RBP eCLIP9.2□□□□□ -0.94
SND1-205ENST00000467238 KRT24Q2M2I5 525 aa9.2□□□□□ -0.94
SND1-205ENST00000467238 PARP10Q53GL7 1025 aa9.2□□□□□ -0.94
SND1-205ENST00000467238 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
SND1-205ENST00000467238 SYNE4Q8N205 404 aa9.2□□□□□ -0.94
SND1-205ENST00000467238 JMYQ8N9B5 988 aa9.2□□□□□ -0.94
SND1-205ENST00000467238 PXYLP1Q8TE99 480 aa9.2□□□□□ -0.94
SND1-205ENST00000467238 RPGRQ92834 1020 aaKnown RBP9.2□□□□□ -0.94
SND1-205ENST00000467238 PSMD1Q99460 953 aa9.2□□□□□ -0.94
SND1-205ENST00000467238 PRKRIP1Q9H875 184 aaPredicted RBP9.2□□□□□ -0.94
SND1-205ENST00000467238 ADAMTS8Q9UP79 889 aa9.2□□□□□ -0.94
SND1-205ENST00000467238 MYH3P11055 1940 aa9.2□□□□□ -0.94
SND1-205ENST00000467238 ZNF541Q9H0D2 1346 aa9.2□□□□□ -0.94
SND1-205ENST00000467238 LTBP1Q14766 1721 aa9.19□□□□□ -0.94
SND1-205ENST00000467238 IQCA1LA6NCM1 817 aa9.19□□□□□ -0.94
SND1-205ENST00000467238 OATP04181 439 aa9.19□□□□□ -0.94
SND1-205ENST00000467238 HSP90AB3PQ58FF7 597 aa9.19□□□□□ -0.94
SND1-205ENST00000467238 MORN1Q5T089 497 aa9.19□□□□□ -0.94
SND1-205ENST00000467238 COPS6Q7L5N1 327 aa9.19□□□□□ -0.94
SND1-205ENST00000467238 PPP1R42Q7Z4L9 355 aa9.19□□□□□ -0.94
SND1-205ENST00000467238 GPIHBP1Q8IV16 184 aa9.19□□□□□ -0.94
SND1-205ENST00000467238 XAGE3Q8WTP9 111 aa9.19□□□□□ -0.94
SND1-205ENST00000467238 CRAMP1Q96RY5 1269 aa9.19□□□□□ -0.94
SND1-205ENST00000467238 UTP14AQ9BVJ6 771 aaKnown RBP9.19□□□□□ -0.94
SND1-205ENST00000467238 DDX21Q9NR30 783 aaKnown RBP eCLIP9.19□□□□□ -0.94
SND1-205ENST00000467238 RNF123Q5XPI4 1314 aa9.19□□□□□ -0.94
SND1-205ENST00000467238 LRRC37AA6NMS7 1700 aa9.19□□□□□ -0.94
SND1-205ENST00000467238 FZD9O00144 591 aa9.18□□□□□ -0.94
SND1-205ENST00000467238 GPR37O15354 613 aa9.18□□□□□ -0.94
SND1-205ENST00000467238 AIMP1Q12904 312 aaKnown RBP9.18□□□□□ -0.94
SND1-205ENST00000467238 SLC10A5Q5PT55 438 aa9.18□□□□□ -0.94
SND1-205ENST00000467238 SLC51AQ86UW1 340 aa9.18□□□□□ -0.94
SND1-205ENST00000467238 RBM17Q96I25 401 aaKnown RBP9.18□□□□□ -0.94
SND1-205ENST00000467238 MRGPRX2Q96LB1 330 aa9.18□□□□□ -0.94
SND1-205ENST00000467238 NLRP3Q96P20 1036 aa9.18□□□□□ -0.94
SND1-205ENST00000467238 TAF1DQ9H5J8 278 aaPredicted RBP9.18□□□□□ -0.94
SND1-205ENST00000467238 CHPF2Q9P2E5 772 aa9.18□□□□□ -0.94
SND1-205ENST00000467238 ABCC4O15439 1325 aa9.17□□□□□ -0.94
SND1-205ENST00000467238 ZMYND10O75800 440 aa9.17□□□□□ -0.94
SND1-205ENST00000467238 HOXB7P09629 217 aa9.17□□□□□ -0.94
SND1-205ENST00000467238 TCIRG1Q13488 830 aa9.17□□□□□ -0.94
SND1-205ENST00000467238 GRIPAP1Q4V328 841 aa9.17□□□□□ -0.94
SND1-205ENST00000467238 NLRP10Q86W26 655 aa9.17□□□□□ -0.94
SND1-205ENST00000467238 LDHDQ86WU2 507 aa9.17□□□□□ -0.94
SND1-205ENST00000467238 KIFC2Q96AC6 838 aa9.17□□□□□ -0.94
SND1-205ENST00000467238 NXF1Q9UBU9 619 aaKnown RBP9.17□□□□□ -0.94
SND1-205ENST00000467238 LAS1LQ9Y4W2 734 aaKnown RBP9.17□□□□□ -0.94
SND1-205ENST00000467238 PASKQ96RG2 1323 aa9.16□□□□□ -0.94
SND1-205ENST00000467238 SCN9AQ15858 1988 aa9.16□□□□□ -0.94
SND1-205ENST00000467238 HDGFL1Q5TGJ6 251 aa9.16□□□□□ -0.94
SND1-205ENST00000467238 METTL3Q86U44 580 aaKnown RBP9.16□□□□□ -0.94
SND1-205ENST00000467238 GPC2Q8N158 579 aa9.16□□□□□ -0.94
SND1-205ENST00000467238 JDP2Q8WYK2 163 aa9.16□□□□□ -0.94
SND1-205ENST00000467238 HACL1Q9UJ83 578 aa9.16□□□□□ -0.94
SND1-205ENST00000467238 PSME4Q14997 1843 aa9.15□□□□□ -0.94
SND1-205ENST00000467238 SH3TC1Q8TE82 1336 aa9.15□□□□□ -0.94
SND1-205ENST00000467238 TCERG1O14776 1098 aaKnown RBP9.15□□□□□ -0.94
SND1-205ENST00000467238 ZNF853P0CG23 659 aa9.15□□□□□ -0.94
SND1-205ENST00000467238 HCLS1P14317 486 aaPredicted RBP9.15□□□□□ -0.94
SND1-205ENST00000467238 EPHX2P34913 555 aa9.15□□□□□ -0.94
SND1-205ENST00000467238 VEGFBP49765 207 aa9.15□□□□□ -0.94
SND1-205ENST00000467238 EIF6P56537 245 aaKnown RBP9.15□□□□□ -0.94
SND1-205ENST00000467238 LARGE2Q8N3Y3 721 aa9.15□□□□□ -0.94
SND1-205ENST00000467238 PLBD2Q8NHP8 589 aa9.15□□□□□ -0.94
SND1-205ENST00000467238 MBIPQ9NS73 344 aa9.15□□□□□ -0.94
SND1-205ENST00000467238 DBF4Q9UBU7 674 aaPredicted RBP9.15□□□□□ -0.94
SND1-205ENST00000467238 TRMT112Q9UI30 125 aaKnown RBP9.15□□□□□ -0.94
SND1-205ENST00000467238 ATP6V0A2Q9Y487 856 aa9.15□□□□□ -0.94
SND1-205ENST00000467238 DUOX1Q9NRD9 1551 aa9.15□□□□□ -0.95
SND1-205ENST00000467238 COL4A1P02462 1669 aa9.14□□□□□ -0.95
SND1-205ENST00000467238 APAF1O14727 1248 aa9.14□□□□□ -0.95
SND1-205ENST00000467238 PPIP5K2O43314 1243 aa9.14□□□□□ -0.95
SND1-205ENST00000467238 EAPPQ56P03 285 aaPredicted RBP9.14□□□□□ -0.95
SND1-205ENST00000467238 DUSP27Q5VZP5 1158 aa9.14□□□□□ -0.95
SND1-205ENST00000467238 ISCA1Q9BUE6 129 aa9.14□□□□□ -0.95
SND1-205ENST00000467238 RTFDC1Q9BY42 306 aaPredicted RBP9.14□□□□□ -0.95
SND1-205ENST00000467238 IFT57Q9NWB7 429 aa9.14□□□□□ -0.95
SND1-205ENST00000467238 HYPKQ9NX55 129 aa9.14□□□□□ -0.95
SND1-205ENST00000467238 SPEF2Q9C093 1822 aa9.14□□□□□ -0.95
SND1-205ENST00000467238 BBOX1O75936 387 aa9.13□□□□□ -0.95
SND1-205ENST00000467238 SCNN1DP51172 638 aa9.13□□□□□ -0.95
SND1-205ENST00000467238 FUT2Q10981 343 aa9.13□□□□□ -0.95
SND1-205ENST00000467238 TRIM32Q13049 653 aa9.13□□□□□ -0.95
SND1-205ENST00000467238 GRAPQ13588 217 aa9.13□□□□□ -0.95
SND1-205ENST00000467238 DDX46Q7L014 1031 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms