RNA–Protein interactions for RNA: ENST00000459809.5

PHF1-206, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-206ENST00000459809 UBTFL1P0CB47 393 aaPredicted RBP16.38■□□□□ 0.21
PHF1-206ENST00000459809 DLGAP5Q15398 846 aa16.38■□□□□ 0.21
PHF1-206ENST00000459809 CAVIN4Q5BKX8 364 aa16.38■□□□□ 0.21
PHF1-206ENST00000459809 ZBED3Q96IU2 234 aaPredicted RBP16.38■□□□□ 0.21
PHF1-206ENST00000459809 FBXO3Q9UK99 471 aa16.38■□□□□ 0.21
PHF1-206ENST00000459809 KIF16BQ96L93 1317 aa16.38■□□□□ 0.21
PHF1-206ENST00000459809 NF2P35240 595 aa16.37■□□□□ 0.21
PHF1-206ENST00000459809 LRRC24Q50LG9 513 aa16.37■□□□□ 0.21
PHF1-206ENST00000459809 FBXO33Q7Z6M2 555 aa16.37■□□□□ 0.21
PHF1-206ENST00000459809 VPS37DQ86XT2 251 aa16.37■□□□□ 0.21
PHF1-206ENST00000459809 APOBEC3FQ8IUX4 373 aaKnown RBP16.37■□□□□ 0.21
PHF1-206ENST00000459809 CERS5Q8N5B7 392 aa16.37■□□□□ 0.21
PHF1-206ENST00000459809 TRPM7Q96QT4 1865 aa16.36■□□□□ 0.21
PHF1-206ENST00000459809 MYO1BO43795 1136 aa16.36■□□□□ 0.21
PHF1-206ENST00000459809 GYG1P46976 350 aa16.36■□□□□ 0.21
PHF1-206ENST00000459809 ZNF157P51786 506 aaPredicted RBP16.36■□□□□ 0.21
PHF1-206ENST00000459809 LBX1P52954 281 aa16.36■□□□□ 0.21
PHF1-206ENST00000459809 INTS3Q68E01 1043 aaKnown RBP16.36■□□□□ 0.21
PHF1-206ENST00000459809 REM2Q8IYK8 340 aaPredicted RBP16.36■□□□□ 0.21
PHF1-206ENST00000459809 EYA2O00167 538 aa16.35■□□□□ 0.21
PHF1-206ENST00000459809 GNAI3P08754 354 aa16.35■□□□□ 0.21
PHF1-206ENST00000459809 HSPA8P11142 646 aaKnown RBP16.35■□□□□ 0.21
PHF1-206ENST00000459809 RFX5P48382 616 aaPredicted RBP16.35■□□□□ 0.21
PHF1-206ENST00000459809 VGLL2Q8N8G2 317 aa16.35■□□□□ 0.21
PHF1-206ENST00000459809 PCNTO95613 3336 aa16.34■□□□□ 0.21
PHF1-206ENST00000459809 FAM155AB1AL88 458 aaPredicted RBP16.34■□□□□ 0.21
PHF1-206ENST00000459809 CIAO1O76071 339 aa16.34■□□□□ 0.21
PHF1-206ENST00000459809 IFIT1P09914 478 aaKnown RBP16.34■□□□□ 0.21
PHF1-206ENST00000459809 PTPN12Q05209 780 aaKnown RBP16.34■□□□□ 0.21
PHF1-206ENST00000459809 PUM3Q15397 648 aaKnown RBP16.34■□□□□ 0.21
PHF1-206ENST00000459809 MFSD14BQ5SR56 506 aa16.34■□□□□ 0.21
PHF1-206ENST00000459809 KLHDC4Q8TBB5 520 aa16.34■□□□□ 0.21
PHF1-206ENST00000459809 TBC1D22AQ8WUA7 517 aa16.34■□□□□ 0.21
PHF1-206ENST00000459809 SERPINA10Q9UK55 444 aa16.34■□□□□ 0.21
PHF1-206ENST00000459809 PSME4Q14997 1843 aa16.33■□□□□ 0.21
PHF1-206ENST00000459809 FRAT2O75474 233 aaPredicted RBP16.33■□□□□ 0.2
PHF1-206ENST00000459809 HNRNPUQ00839 825 aaKnown RBP eCLIP16.33■□□□□ 0.2
PHF1-206ENST00000459809 CFAP100Q494V2 611 aa16.33■□□□□ 0.2
PHF1-206ENST00000459809 MRIQ9BWK5 157 aa16.33■□□□□ 0.2
PHF1-206ENST00000459809 PPP2R3BQ9Y5P8 575 aa16.33■□□□□ 0.2
PHF1-206ENST00000459809 SPEF2Q9C093 1822 aa16.33■□□□□ 0.2
PHF1-206ENST00000459809 SPDYE2BA6NHP3 402 aa16.32■□□□□ 0.2
PHF1-206ENST00000459809 F8W031 263 aaPredicted RBP16.32■□□□□ 0.2
PHF1-206ENST00000459809 SLC10A3P09131 477 aa16.32■□□□□ 0.2
PHF1-206ENST00000459809 SPDYE6P0CI01 402 aa16.32■□□□□ 0.2
PHF1-206ENST00000459809 FGFR2P21802 821 aa16.32■□□□□ 0.2
PHF1-206ENST00000459809 PRAMEF18Q5VWM3 479 aa16.32■□□□□ 0.2
PHF1-206ENST00000459809 LPIN2Q92539 896 aa16.32■□□□□ 0.2
PHF1-206ENST00000459809 PRMT6Q96LA8 375 aaPredicted RBP16.32■□□□□ 0.2
PHF1-206ENST00000459809 DEFB129Q9H1M3 183 aa16.32■□□□□ 0.2
PHF1-206ENST00000459809 CEP126Q9P2H0 1117 aa16.32■□□□□ 0.2
PHF1-206ENST00000459809 SCAF8Q9UPN6 1271 aaKnown RBP16.32■□□□□ 0.2
PHF1-206ENST00000459809 SLC5A1P13866 664 aa16.31■□□□□ 0.2
PHF1-206ENST00000459809 IL15P40933 162 aaPredicted RBP16.31■□□□□ 0.2
PHF1-206ENST00000459809 RBM5P52756 815 aaKnown RBP eCLIP16.31■□□□□ 0.2
PHF1-206ENST00000459809 HDLBPQ00341 1268 aaKnown RBP16.31■□□□□ 0.2
PHF1-206ENST00000459809 KIF23Q02241 960 aaPredicted RBP16.31■□□□□ 0.2
PHF1-206ENST00000459809 ATF7IPQ6VMQ6 1270 aa16.31■□□□□ 0.2
PHF1-206ENST00000459809 ATG9AQ7Z3C6 839 aa16.31■□□□□ 0.2
PHF1-206ENST00000459809 ARMC9Q7Z3E5 817 aa16.31■□□□□ 0.2
PHF1-206ENST00000459809 TTF2Q9UNY4 1162 aaKnown RBP16.31■□□□□ 0.2
PHF1-206ENST00000459809 JAG2Q9Y219 1238 aa16.31■□□□□ 0.2
PHF1-206ENST00000459809 SUGT1Q9Y2Z0 365 aa16.31■□□□□ 0.2
PHF1-206ENST00000459809 LRRFIP2Q9Y608 721 aaKnown RBP16.31■□□□□ 0.2
PHF1-206ENST00000459809 UNCXA6NJT0 531 aa16.3■□□□□ 0.2
PHF1-206ENST00000459809 UBE2Q2LH0YL09 131 aa16.3■□□□□ 0.2
PHF1-206ENST00000459809 BCAR3O75815 825 aa16.3■□□□□ 0.2
PHF1-206ENST00000459809 BCAMP50895 628 aa16.3■□□□□ 0.2
PHF1-206ENST00000459809 TTLL12Q14166 644 aaPredicted RBP16.3■□□□□ 0.2
PHF1-206ENST00000459809 SUPT20HL1Q3ZLR7 823 aa16.3■□□□□ 0.2
PHF1-206ENST00000459809 FRAT1Q92837 279 aaPredicted RBP16.3■□□□□ 0.2
PHF1-206ENST00000459809 MEIS3Q99687 375 aa16.3■□□□□ 0.2
PHF1-206ENST00000459809 COPRSQ9NQ92 184 aa16.3■□□□□ 0.2
PHF1-206ENST00000459809 SAGE1Q9NXZ1 904 aa16.3■□□□□ 0.2
PHF1-206ENST00000459809 TRIM27P14373 513 aa16.29■□□□□ 0.2
PHF1-206ENST00000459809 ZIC5Q96T25 663 aa16.29■□□□□ 0.2
PHF1-206ENST00000459809 COL1A1P02452 1464 aaPredicted RBP16.29■□□□□ 0.2
PHF1-206ENST00000459809 THSD7BQ9C0I4 1608 aa16.28■□□□□ 0.2
PHF1-206ENST00000459809 PPP1R12BO60237 982 aaPredicted RBP16.28■□□□□ 0.2
PHF1-206ENST00000459809 MTX1Q13505 466 aa16.28■□□□□ 0.2
PHF1-206ENST00000459809 TNFAIP1Q13829 316 aa16.28■□□□□ 0.2
PHF1-206ENST00000459809 LDLRAD1Q5T700 205 aa16.28■□□□□ 0.2
PHF1-206ENST00000459809 ZKSCAN2Q63HK3 967 aa16.28■□□□□ 0.2
PHF1-206ENST00000459809 MOB2Q70IA6 237 aa16.28■□□□□ 0.2
PHF1-206ENST00000459809 DZIP1LQ8IYY4 767 aaKnown RBP16.28■□□□□ 0.2
PHF1-206ENST00000459809 CSRNP1Q96S65 589 aa16.28■□□□□ 0.2
PHF1-206ENST00000459809 GNL3LQ9NVN8 582 aaKnown RBP16.28■□□□□ 0.2
PHF1-206ENST00000459809 ZBTB22O15209 634 aa16.27■□□□□ 0.2
PHF1-206ENST00000459809 CRKP46108 304 aa16.27■□□□□ 0.2
PHF1-206ENST00000459809 CHAF1AQ13111 956 aaPredicted RBP16.27■□□□□ 0.2
PHF1-206ENST00000459809 MAP3K11Q16584 847 aa16.27■□□□□ 0.2
PHF1-206ENST00000459809 RASAL3Q86YV0 1011 aa16.27■□□□□ 0.2
PHF1-206ENST00000459809 WDR66Q8TBY9 1149 aa16.27■□□□□ 0.2
PHF1-206ENST00000459809 SIL1Q9H173 461 aa16.27■□□□□ 0.2
PHF1-206ENST00000459809 IQSEC3Q9UPP2 1182 aaPredicted RBP16.27■□□□□ 0.2
PHF1-206ENST00000459809 PCDHAC2Q9Y5I4 1007 aa16.27■□□□□ 0.2
PHF1-206ENST00000459809 POLR2AP24928 1970 aaKnown RBP16.27■□□□□ 0.19
PHF1-206ENST00000459809 MAST3O60307 1309 aa16.26■□□□□ 0.19
PHF1-206ENST00000459809 CLRN2A0PK11 232 aa16.26■□□□□ 0.19
PHF1-206ENST00000459809 SRGAP3O43295 1099 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms