RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 TTLL5Q6EMB2 1281 aa23.57■■□□□ 1.36
CSPG5-203ENST00000456150 PIBF1Q8WXW3 757 aa23.57■■□□□ 1.36
CSPG5-203ENST00000456150 ZNF396Q96N95 335 aaPredicted RBP23.57■■□□□ 1.36
CSPG5-203ENST00000456150 A0A0G2JS52 829 aa23.56■■□□□ 1.36
CSPG5-203ENST00000456150 GOLGA6L6A8MZA4 724 aa23.56■■□□□ 1.36
CSPG5-203ENST00000456150 NR1I2O75469 434 aa23.56■■□□□ 1.36
CSPG5-203ENST00000456150 ZAP70P43403 619 aa23.56■■□□□ 1.36
CSPG5-203ENST00000456150 NLRP10Q86W26 655 aa23.56■■□□□ 1.36
CSPG5-203ENST00000456150 CKAP2LQ8IYA6 745 aa23.56■■□□□ 1.36
CSPG5-203ENST00000456150 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.56■■□□□ 1.36
CSPG5-203ENST00000456150 SASS6Q6UVJ0 657 aa23.56■■□□□ 1.36
CSPG5-203ENST00000456150 RCOR1Q9UKL0 485 aa23.56■■□□□ 1.36
CSPG5-203ENST00000456150 RIPOR2Q9Y4F9 1068 aa23.56■■□□□ 1.36
CSPG5-203ENST00000456150 SCARF1Q14162 830 aa23.55■■□□□ 1.36
CSPG5-203ENST00000456150 ZSCAN25Q6NSZ9 544 aa23.55■■□□□ 1.36
CSPG5-203ENST00000456150 NCOA5Q9HCD5 579 aaKnown RBP23.55■■□□□ 1.36
CSPG5-203ENST00000456150 ANKRD18BA2A2Z9 1011 aa23.55■■□□□ 1.36
CSPG5-203ENST00000456150 ITGA6P23229 1130 aa23.55■■□□□ 1.36
CSPG5-203ENST00000456150 ADD1P35611 737 aaKnown RBP23.55■■□□□ 1.36
CSPG5-203ENST00000456150 CTSWP56202 376 aa23.55■■□□□ 1.36
CSPG5-203ENST00000456150 LDHAL6AQ6ZMR3 332 aa23.55■■□□□ 1.36
CSPG5-203ENST00000456150 TTLL11Q8NHH1 800 aa23.55■■□□□ 1.36
CSPG5-203ENST00000456150 CARMIL3Q8ND23 1372 aa23.54■■□□□ 1.36
CSPG5-203ENST00000456150 AP5Z1O43299 807 aa23.54■■□□□ 1.36
CSPG5-203ENST00000456150 RRP9O43818 475 aaKnown RBP23.54■■□□□ 1.36
CSPG5-203ENST00000456150 CAVIN2O95810 425 aa23.54■■□□□ 1.36
CSPG5-203ENST00000456150 ANO6Q4KMQ2 910 aa23.54■■□□□ 1.36
CSPG5-203ENST00000456150 CHST3Q7LGC8 479 aa23.54■■□□□ 1.36
CSPG5-203ENST00000456150 ZNF512BQ96KM6 892 aaPredicted RBP23.54■■□□□ 1.36
CSPG5-203ENST00000456150 AKAP11Q9UKA4 1901 aa23.54■■□□□ 1.36
CSPG5-203ENST00000456150 DDX60Q8IY21 1712 aaKnown RBP23.53■■□□□ 1.36
CSPG5-203ENST00000456150 FOXP2O15409 715 aa23.53■■□□□ 1.36
CSPG5-203ENST00000456150 FGAP02671 866 aa23.53■■□□□ 1.36
CSPG5-203ENST00000456150 HLFQ16534 295 aa23.53■■□□□ 1.36
CSPG5-203ENST00000456150 TTC12Q9H892 705 aaPredicted RBP23.53■■□□□ 1.36
CSPG5-203ENST00000456150 DHX16O60231 1041 aaKnown RBP23.53■■□□□ 1.36
CSPG5-203ENST00000456150 GPTP24298 496 aa23.53■■□□□ 1.36
CSPG5-203ENST00000456150 TTF1Q15361 905 aaPredicted RBP23.53■■□□□ 1.36
CSPG5-203ENST00000456150 GJD4Q96KN9 370 aaPredicted RBP23.53■■□□□ 1.36
CSPG5-203ENST00000456150 ZNF830Q96NB3 372 aaPredicted RBP23.53■■□□□ 1.36
CSPG5-203ENST00000456150 SLC4A9Q96Q91 983 aa23.53■■□□□ 1.36
CSPG5-203ENST00000456150 CBX8Q9HC52 389 aa23.53■■□□□ 1.36
CSPG5-203ENST00000456150 WDR19Q8NEZ3 1342 aa23.53■■□□□ 1.36
CSPG5-203ENST00000456150 NUP98P52948 1817 aa23.52■■□□□ 1.36
CSPG5-203ENST00000456150 CTAGE5O15320 804 aa23.52■■□□□ 1.36
CSPG5-203ENST00000456150 CYP19A1P11511 503 aaPredicted RBP23.52■■□□□ 1.36
CSPG5-203ENST00000456150 FOSBP53539 338 aa23.52■■□□□ 1.36
CSPG5-203ENST00000456150 MPNDQ8N594 471 aa23.52■■□□□ 1.36
CSPG5-203ENST00000456150 NCOA7Q8NI08 942 aa23.52■■□□□ 1.36
CSPG5-203ENST00000456150 PUS7LQ9H0K6 701 aaKnown RBP23.52■■□□□ 1.36
CSPG5-203ENST00000456150 GREM2Q9H772 168 aa23.52■■□□□ 1.36
CSPG5-203ENST00000456150 CNNM1Q9NRU3 951 aa23.52■■□□□ 1.36
CSPG5-203ENST00000456150 GPAA1O43292 621 aa23.52■■□□□ 1.35
CSPG5-203ENST00000456150 RALYLQ86SE5 291 aaKnown RBP23.52■■□□□ 1.35
CSPG5-203ENST00000456150 MB21D2Q8IYB1 491 aaPredicted RBP23.52■■□□□ 1.35
CSPG5-203ENST00000456150 IRS4O14654 1257 aaPredicted RBP23.51■■□□□ 1.35
CSPG5-203ENST00000456150 KCNQ2O43526 872 aa23.51■■□□□ 1.35
CSPG5-203ENST00000456150 PRC1O43663 620 aa23.51■■□□□ 1.35
CSPG5-203ENST00000456150 HAND2P61296 217 aa23.51■■□□□ 1.35
CSPG5-203ENST00000456150 CEBPZQ03701 1054 aaKnown RBP23.51■■□□□ 1.35
CSPG5-203ENST00000456150 LUZP1Q86V48 1076 aa23.51■■□□□ 1.35
CSPG5-203ENST00000456150 THSD7AQ9UPZ6 1657 aa23.51■■□□□ 1.35
CSPG5-203ENST00000456150 ZNF213O14771 459 aa23.5■■□□□ 1.35
CSPG5-203ENST00000456150 ATRNO75882 1429 aa23.5■■□□□ 1.35
CSPG5-203ENST00000456150 MCAMP43121 646 aa23.5■■□□□ 1.35
CSPG5-203ENST00000456150 NOLC1Q14978 699 aaKnown RBP eCLIP23.5■■□□□ 1.35
CSPG5-203ENST00000456150 SYNE4Q8N205 404 aa23.5■■□□□ 1.35
CSPG5-203ENST00000456150 HSP90AA2PQ14568 343 aaPredicted RBP23.5■■□□□ 1.35
CSPG5-203ENST00000456150 CCDC73Q6ZRK6 1079 aa23.5■■□□□ 1.35
CSPG5-203ENST00000456150 CCAR1Q8IX12 1150 aaKnown RBP23.5■■□□□ 1.35
CSPG5-203ENST00000456150 TDRD7Q8NHU6 1098 aaKnown RBP23.5■■□□□ 1.35
CSPG5-203ENST00000456150 USP28Q96RU2 1077 aa23.5■■□□□ 1.35
CSPG5-203ENST00000456150 TRMT112Q9UI30 125 aaKnown RBP23.5■■□□□ 1.35
CSPG5-203ENST00000456150 ERVV-1B6SEH8 477 aa23.49■■□□□ 1.35
CSPG5-203ENST00000456150 PDE8AO60658 829 aa23.49■■□□□ 1.35
CSPG5-203ENST00000456150 FAM182BQ5T319 152 aa23.49■■□□□ 1.35
CSPG5-203ENST00000456150 PI16Q6UXB8 463 aa23.49■■□□□ 1.35
CSPG5-203ENST00000456150 UQCRHLA0A096LP55 91 aa23.48■■□□□ 1.35
CSPG5-203ENST00000456150 UQCRHP07919 91 aa23.48■■□□□ 1.35
CSPG5-203ENST00000456150 ADD2P35612 726 aa23.48■■□□□ 1.35
CSPG5-203ENST00000456150 DNTTIP2Q5QJE6 756 aaKnown RBP23.48■■□□□ 1.35
CSPG5-203ENST00000456150 VGLL2Q8N8G2 317 aa23.48■■□□□ 1.35
CSPG5-203ENST00000456150 SPTLC3Q9NUV7 552 aa23.48■■□□□ 1.35
CSPG5-203ENST00000456150 KLF18A0A0U1RQI7 1052 aa23.48■■□□□ 1.35
CSPG5-203ENST00000456150 FDPSP14324 419 aaKnown RBP23.48■■□□□ 1.35
CSPG5-203ENST00000456150 ZNF165P49910 485 aa23.48■■□□□ 1.35
CSPG5-203ENST00000456150 ZBTB1Q9Y2K1 713 aa23.48■■□□□ 1.35
CSPG5-203ENST00000456150 GOLGA8BA8MQT2 603 aa23.47■■□□□ 1.35
CSPG5-203ENST00000456150 PDE8BO95263 885 aa23.47■■□□□ 1.35
CSPG5-203ENST00000456150 UQCRFS1P1P0C7P4 283 aa23.47■■□□□ 1.35
CSPG5-203ENST00000456150 GUCY1B3Q02153 619 aa23.47■■□□□ 1.35
CSPG5-203ENST00000456150 TRDNQ13061 729 aa23.47■■□□□ 1.35
CSPG5-203ENST00000456150 SPC24Q8NBT2 197 aa23.47■■□□□ 1.35
CSPG5-203ENST00000456150 TRPC5Q9UL62 973 aaPredicted RBP23.47■■□□□ 1.35
CSPG5-203ENST00000456150 ARAP2Q8WZ64 1704 aa23.46■■□□□ 1.35
CSPG5-203ENST00000456150 IL6STP40189 918 aaPredicted RBP23.46■■□□□ 1.35
CSPG5-203ENST00000456150 UBE3CQ15386 1083 aa23.46■■□□□ 1.35
CSPG5-203ENST00000456150 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.46■■□□□ 1.35
CSPG5-203ENST00000456150 FTOQ9C0B1 505 aaKnown RBP eCLIP23.46■■□□□ 1.35
CSPG5-203ENST00000456150 GPHNQ9NQX3 736 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms