RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 NEDD4P46934 1319 aa21.43■■□□□ 1.02
PTPA-223ENST00000452489 VSTM4Q8IW00 320 aa21.43■■□□□ 1.02
PTPA-223ENST00000452489 GOLGA6L9A6NEM1 432 aa21.42■■□□□ 1.02
PTPA-223ENST00000452489 PRPF6O94906 941 aaKnown RBP21.42■■□□□ 1.02
PTPA-223ENST00000452489 MIEF2Q96C03 454 aa21.42■■□□□ 1.02
PTPA-223ENST00000452489 MRPL44Q9H9J2 332 aaKnown RBP21.42■■□□□ 1.02
PTPA-223ENST00000452489 POTEB2H3BUK9 544 aa21.42■■□□□ 1.02
PTPA-223ENST00000452489 IRF6O14896 467 aa21.42■■□□□ 1.02
PTPA-223ENST00000452489 C21orf2O43822 256 aa21.42■■□□□ 1.02
PTPA-223ENST00000452489 RIN2Q8WYP3 895 aaPredicted RBP21.42■■□□□ 1.02
PTPA-223ENST00000452489 MRPS27Q92552 414 aaKnown RBP21.42■■□□□ 1.02
PTPA-223ENST00000452489 MAP4K1Q92918 833 aa21.42■■□□□ 1.02
PTPA-223ENST00000452489 GPTP24298 496 aa21.41■■□□□ 1.02
PTPA-223ENST00000452489 NECTIN2Q92692 538 aa21.41■■□□□ 1.02
PTPA-223ENST00000452489 FAXDC2Q96IV6 333 aa21.41■■□□□ 1.02
PTPA-223ENST00000452489 USP44Q9H0E7 712 aa21.41■■□□□ 1.02
PTPA-223ENST00000452489 EHD4Q9H223 541 aa21.41■■□□□ 1.02
PTPA-223ENST00000452489 PCDHA7Q9UN72 937 aa21.41■■□□□ 1.02
PTPA-223ENST00000452489 MROH1Q8NDA8 1641 aa21.41■■□□□ 1.02
PTPA-223ENST00000452489 ATP7BP35670 1465 aa21.41■■□□□ 1.02
PTPA-223ENST00000452489 MTX1Q13505 466 aa21.4■■□□□ 1.02
PTPA-223ENST00000452489 RRS1Q15050 365 aaKnown RBP21.4■■□□□ 1.02
PTPA-223ENST00000452489 PDILTQ8N807 584 aa21.4■■□□□ 1.02
PTPA-223ENST00000452489 IGSF22Q8N9C0 903 aa21.4■■□□□ 1.02
PTPA-223ENST00000452489 CD248Q9HCU0 757 aa21.4■■□□□ 1.02
PTPA-223ENST00000452489 EBAG9O00559 213 aa21.4■■□□□ 1.02
PTPA-223ENST00000452489 PPFIA3O75145 1194 aa21.4■■□□□ 1.02
PTPA-223ENST00000452489 ECM2O94769 699 aaPredicted RBP21.4■■□□□ 1.02
PTPA-223ENST00000452489 UBTFL1P0CB47 393 aaPredicted RBP21.4■■□□□ 1.02
PTPA-223ENST00000452489 NLRP12P59046 1061 aa21.4■■□□□ 1.02
PTPA-223ENST00000452489 ZRANB1Q9UGI0 708 aa21.4■■□□□ 1.02
PTPA-223ENST00000452489 A0A0U1RQJ8 604 aa21.39■■□□□ 1.02
PTPA-223ENST00000452489 MYO1FO00160 1098 aa21.39■■□□□ 1.02
PTPA-223ENST00000452489 GLRX3O76003 335 aaKnown RBP21.39■■□□□ 1.02
PTPA-223ENST00000452489 INPP5BP32019 993 aa21.39■■□□□ 1.02
PTPA-223ENST00000452489 ELF1P32519 619 aa21.39■■□□□ 1.02
PTPA-223ENST00000452489 FLIIQ13045 1269 aa21.39■■□□□ 1.02
PTPA-223ENST00000452489 PRPF38AQ8NAV1 312 aaKnown RBP21.39■■□□□ 1.02
PTPA-223ENST00000452489 ATRIPQ8WXE1 791 aa21.39■■□□□ 1.02
PTPA-223ENST00000452489 SLC24A3Q9HC58 644 aa21.39■■□□□ 1.02
PTPA-223ENST00000452489 LZTFL1Q9NQ48 299 aa21.39■■□□□ 1.02
PTPA-223ENST00000452489 ADKP55263 362 aaKnown RBP21.39■■□□□ 1.01
PTPA-223ENST00000452489 GRIPAP1Q4V328 841 aa21.39■■□□□ 1.01
PTPA-223ENST00000452489 CDC23Q9UJX2 597 aa21.39■■□□□ 1.01
PTPA-223ENST00000452489 PAX7P23759 505 aa21.38■■□□□ 1.01
PTPA-223ENST00000452489 MAP2K1Q02750 393 aaPredicted RBP21.38■■□□□ 1.01
PTPA-223ENST00000452489 BIRC2Q13490 618 aa21.38■■□□□ 1.01
PTPA-223ENST00000452489 MTF1Q14872 753 aa21.38■■□□□ 1.01
PTPA-223ENST00000452489 CEP112Q8N8E3 955 aa21.38■■□□□ 1.01
PTPA-223ENST00000452489 KAT14Q9H8E8 782 aa21.38■■□□□ 1.01
PTPA-223ENST00000452489 CAPN7Q9Y6W3 813 aa21.38■■□□□ 1.01
PTPA-223ENST00000452489 SETQ01105 290 aaPredicted RBP21.38■■□□□ 1.01
PTPA-223ENST00000452489 N4BP2L2Q92802 583 aaPredicted RBP21.38■■□□□ 1.01
PTPA-223ENST00000452489 ACBD3Q9H3P7 528 aa21.38■■□□□ 1.01
PTPA-223ENST00000452489 INTS13Q9NVM9 706 aa21.38■■□□□ 1.01
PTPA-223ENST00000452489 FANCLQ9NW38 375 aa21.38■■□□□ 1.01
PTPA-223ENST00000452489 CDHR2Q9BYE9 1310 aa21.38■■□□□ 1.01
PTPA-223ENST00000452489 FRMPD1Q5SYB0 1578 aa21.38■■□□□ 1.01
PTPA-223ENST00000452489 CRYBG1Q9Y4K1 1723 aa21.38■■□□□ 1.01
PTPA-223ENST00000452489 SLC3A2P08195 630 aaKnown RBP21.37■■□□□ 1.01
PTPA-223ENST00000452489 GUCY1B3Q02153 619 aa21.37■■□□□ 1.01
PTPA-223ENST00000452489 NMIQ13287 307 aaPredicted RBP21.37■■□□□ 1.01
PTPA-223ENST00000452489 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.37■■□□□ 1.014e-10■■■■■ 77.9
PTPA-223ENST00000452489 SMARCC1Q92922 1105 aaPredicted RBP21.37■■□□□ 1.01
PTPA-223ENST00000452489 NPHP4O75161 1426 aaPredicted RBP21.37■■□□□ 1.01
PTPA-223ENST00000452489 NEBLO76041 1014 aa21.37■■□□□ 1.01
PTPA-223ENST00000452489 HSP90B1P14625 803 aaKnown RBP21.37■■□□□ 1.01
PTPA-223ENST00000452489 HSP90AA4PQ58FG1 418 aa21.37■■□□□ 1.01
PTPA-223ENST00000452489 NAIF1Q69YI7 327 aaPredicted RBP21.37■■□□□ 1.01
PTPA-223ENST00000452489 CABS1Q96KC9 395 aa21.37■■□□□ 1.01
PTPA-223ENST00000452489 A1CFQ9NQ94 594 aaKnown RBP21.37■■□□□ 1.01
PTPA-223ENST00000452489 MCM8Q9UJA3 840 aa21.37■■□□□ 1.01
PTPA-223ENST00000452489 CBFA2T2O43439 604 aa21.36■■□□□ 1.01
PTPA-223ENST00000452489 NEDD9Q14511 834 aa21.36■■□□□ 1.01
PTPA-223ENST00000452489 FAM43BQ6ZT52 329 aaPredicted RBP21.36■■□□□ 1.01
PTPA-223ENST00000452489 ILDR1Q86SU0 546 aaPredicted RBP21.36■■□□□ 1.01
PTPA-223ENST00000452489 STAG1Q8WVM7 1258 aa21.36■■□□□ 1.01
PTPA-223ENST00000452489 RPGRIP1LQ68CZ1 1315 aa21.36■■□□□ 1.01
PTPA-223ENST00000452489 IBSPP21815 317 aaPredicted RBP21.36■■□□□ 1.01
PTPA-223ENST00000452489 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.36■■□□□ 1.01
PTPA-223ENST00000452489 POTEDQ86YR6 584 aa21.36■■□□□ 1.01
PTPA-223ENST00000452489 ZKSCAN4Q969J2 545 aaPredicted RBP21.36■■□□□ 1.01
PTPA-223ENST00000452489 IKBKBO14920 756 aa21.35■■□□□ 1.01
PTPA-223ENST00000452489 SHOX2O60902 331 aaPredicted RBP21.35■■□□□ 1.01
PTPA-223ENST00000452489 POLA2Q14181 598 aa21.35■■□□□ 1.01
PTPA-223ENST00000452489 TTC19Q6DKK2 380 aaPredicted RBP21.35■■□□□ 1.01
PTPA-223ENST00000452489 SULT6B1Q6IMI4 303 aa21.35■■□□□ 1.01
PTPA-223ENST00000452489 TC2NQ8N9U0 490 aa21.35■■□□□ 1.01
PTPA-223ENST00000452489 STK31Q9BXU1 1019 aa21.35■■□□□ 1.01
PTPA-223ENST00000452489 MAP3K5Q99683 1374 aa21.35■■□□□ 1.01
PTPA-223ENST00000452489 STX10O60499 249 aa21.35■■□□□ 1.01
PTPA-223ENST00000452489 AARSP49588 968 aaKnown RBP eCLIP21.35■■□□□ 1.01
PTPA-223ENST00000452489 ATP2B2Q01814 1243 aa21.35■■□□□ 1.01
PTPA-223ENST00000452489 NOA1Q8NC60 698 aaKnown RBP21.35■■□□□ 1.01
PTPA-223ENST00000452489 CTCFLQ8NI51 663 aaPredicted RBP21.35■■□□□ 1.01
PTPA-223ENST00000452489 ZNF396Q96N95 335 aaPredicted RBP21.35■■□□□ 1.01
PTPA-223ENST00000452489 SEC62Q99442 399 aaKnown RBP21.35■■□□□ 1.01
PTPA-223ENST00000452489 GBP3Q9H0R5 595 aa21.35■■□□□ 1.01
PTPA-223ENST00000452489 ALDH8A1Q9H2A2 487 aaPredicted RBP21.35■■□□□ 1.01
PTPA-223ENST00000452489 IRAK1P51617 712 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms