RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 CNNM1Q9NRU3 951 aa19.7■□□□□ 0.74
TRA2A-203ENST00000448549 C9orf78Q9NZ63 289 aaPredicted RBP19.7■□□□□ 0.74
TRA2A-203ENST00000448549 JAG2Q9Y219 1238 aa19.7■□□□□ 0.74
TRA2A-203ENST00000448549 PCDHAC2Q9Y5I4 1007 aa19.7■□□□□ 0.74
TRA2A-203ENST00000448549 TM4SF4P48230 202 aa19.69■□□□□ 0.74
TRA2A-203ENST00000448549 SLC4A10Q6U841 1118 aa19.69■□□□□ 0.74
TRA2A-203ENST00000448549 FZD1Q9UP38 647 aa19.69■□□□□ 0.74
TRA2A-203ENST00000448549 ZNF646O15015 1829 aaPredicted RBP19.68■□□□□ 0.74
TRA2A-203ENST00000448549 LDLRAD1Q5T700 205 aa19.68■□□□□ 0.74
TRA2A-203ENST00000448549 MTMR14Q8NCE2 650 aa19.68■□□□□ 0.74
TRA2A-203ENST00000448549 ZNF296Q8WUU4 475 aaPredicted RBP19.68■□□□□ 0.74
TRA2A-203ENST00000448549 ANGEL1Q9UNK9 670 aaKnown RBP19.68■□□□□ 0.74
TRA2A-203ENST00000448549 ALDH1L1O75891 902 aa19.67■□□□□ 0.74
TRA2A-203ENST00000448549 ZEB1P37275 1124 aaPredicted RBP19.67■□□□□ 0.74
TRA2A-203ENST00000448549 SOX10P56693 466 aa19.67■□□□□ 0.74
TRA2A-203ENST00000448549 CFAP100Q494V2 611 aa19.67■□□□□ 0.74
TRA2A-203ENST00000448549 SRCIN1Q9C0H9 1055 aa19.67■□□□□ 0.74
TRA2A-203ENST00000448549 CLRN2A0PK11 232 aa19.66■□□□□ 0.74
TRA2A-203ENST00000448549 SPDYE2BA6NHP3 402 aa19.66■□□□□ 0.74
TRA2A-203ENST00000448549 SPDYE6P0CI01 402 aa19.66■□□□□ 0.74
TRA2A-203ENST00000448549 FKBP1AP62942 108 aaKnown RBP19.66■□□□□ 0.74
TRA2A-203ENST00000448549 SREBF2Q12772 1141 aa19.66■□□□□ 0.74
TRA2A-203ENST00000448549 PRMT6Q96LA8 375 aaPredicted RBP19.66■□□□□ 0.74
TRA2A-203ENST00000448549 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.66■□□□□ 0.74
TRA2A-203ENST00000448549 MYO1BO43795 1136 aa19.65■□□□□ 0.74
TRA2A-203ENST00000448549 SPRYD7Q5W111 196 aa19.65■□□□□ 0.74
TRA2A-203ENST00000448549 AOX1Q06278 1338 aa19.65■□□□□ 0.74
TRA2A-203ENST00000448549 GPR25O00155 361 aa19.64■□□□□ 0.73
TRA2A-203ENST00000448549 NBPF7P0C2Y1 421 aaPredicted RBP19.64■□□□□ 0.73
TRA2A-203ENST00000448549 RBM5P52756 815 aaKnown RBP eCLIP19.64■□□□□ 0.73
TRA2A-203ENST00000448549 SLC10A4Q96EP9 437 aa19.64■□□□□ 0.73
TRA2A-203ENST00000448549 KAZALD1Q96I82 304 aa19.64■□□□□ 0.73
TRA2A-203ENST00000448549 SUCLG2Q96I99 432 aa19.64■□□□□ 0.73
TRA2A-203ENST00000448549 PUS3Q9BZE2 481 aaKnown RBP19.64■□□□□ 0.73
TRA2A-203ENST00000448549 VEZTQ9HBM0 779 aa19.64■□□□□ 0.73
TRA2A-203ENST00000448549 PPP2R3BQ9Y5P8 575 aa19.64■□□□□ 0.73
TRA2A-203ENST00000448549 COL1A1P02452 1464 aaPredicted RBP19.63■□□□□ 0.73
TRA2A-203ENST00000448549 PPP1R12BO60237 982 aaPredicted RBP19.63■□□□□ 0.73
TRA2A-203ENST00000448549 GYG1P46976 350 aa19.63■□□□□ 0.73
TRA2A-203ENST00000448549 CLMNQ96JQ2 1002 aa19.63■□□□□ 0.73
TRA2A-203ENST00000448549 R3HDMLQ9H3Y0 253 aa19.63■□□□□ 0.73
TRA2A-203ENST00000448549 HPS5Q9UPZ3 1129 aa19.63■□□□□ 0.73
TRA2A-203ENST00000448549 FAM205AQ6ZU69 1335 aa19.62■□□□□ 0.73
TRA2A-203ENST00000448549 HIBADHP31937 336 aaKnown RBP19.62■□□□□ 0.73
TRA2A-203ENST00000448549 UBE4AQ14139 1066 aa19.62■□□□□ 0.73
TRA2A-203ENST00000448549 PKN2Q16513 984 aaKnown RBP19.62■□□□□ 0.73
TRA2A-203ENST00000448549 MAP3K11Q16584 847 aa19.62■□□□□ 0.73
TRA2A-203ENST00000448549 SUPT20HL1Q3ZLR7 823 aa19.62■□□□□ 0.73
TRA2A-203ENST00000448549 NBPF12Q5TAG4 269 aaPredicted RBP19.62■□□□□ 0.73
TRA2A-203ENST00000448549 TDRD7Q8NHU6 1098 aaKnown RBP19.62■□□□□ 0.73
TRA2A-203ENST00000448549 FAM84BQ96KN1 310 aaPredicted RBP19.62■□□□□ 0.73
TRA2A-203ENST00000448549 SSC5DA1L4H1 1573 aa19.61■□□□□ 0.73
TRA2A-203ENST00000448549 AKAP11Q9UKA4 1901 aa19.61■□□□□ 0.73
TRA2A-203ENST00000448549 RASA3Q14644 834 aa19.61■□□□□ 0.73
TRA2A-203ENST00000448549 NOM1Q5C9Z4 860 aaKnown RBP19.61■□□□□ 0.73
TRA2A-203ENST00000448549 MFSD14BQ5SR56 506 aa19.61■□□□□ 0.73
TRA2A-203ENST00000448549 CFHR5Q9BXR6 569 aa19.6■□□□□ 0.73
TRA2A-203ENST00000448549 TTF2Q9UNY4 1162 aaKnown RBP19.6■□□□□ 0.73
TRA2A-203ENST00000448549 RIPOR2Q9Y4F9 1068 aa19.6■□□□□ 0.73
TRA2A-203ENST00000448549 UTYO14607 1347 aa19.59■□□□□ 0.73
TRA2A-203ENST00000448549 ZNF521Q96K83 1311 aa19.59■□□□□ 0.73
TRA2A-203ENST00000448549 MANSC4A6NHS7 340 aaPredicted RBP19.59■□□□□ 0.73
TRA2A-203ENST00000448549 FKTNO75072 461 aa19.59■□□□□ 0.73
TRA2A-203ENST00000448549 INHBEP58166 350 aa19.59■□□□□ 0.73
TRA2A-203ENST00000448549 MRPL50Q8N5N7 158 aaKnown RBP19.59■□□□□ 0.73
TRA2A-203ENST00000448549 WNK4Q96J92 1243 aa19.59■□□□□ 0.73
TRA2A-203ENST00000448549 BICC1Q9H694 974 aaKnown RBP19.59■□□□□ 0.73
TRA2A-203ENST00000448549 MROH5Q6ZUA9 1318 aa19.58■□□□□ 0.73
TRA2A-203ENST00000448549 USP2O75604 605 aaPredicted RBP19.58■□□□□ 0.72
TRA2A-203ENST00000448549 ALDH1A1P00352 501 aa19.58■□□□□ 0.72
TRA2A-203ENST00000448549 ZBTB48P10074 688 aaPredicted RBP19.58■□□□□ 0.72
TRA2A-203ENST00000448549 IFNL1Q8IU54 200 aa19.58■□□□□ 0.72
TRA2A-203ENST00000448549 ZNF70Q9UC06 446 aaPredicted RBP19.58■□□□□ 0.72
TRA2A-203ENST00000448549 SERPINA10Q9UK55 444 aa19.58■□□□□ 0.72
TRA2A-203ENST00000448549 UNCXA6NJT0 531 aa19.57■□□□□ 0.72
TRA2A-203ENST00000448549 IREB2P48200 963 aaKnown RBP19.57■□□□□ 0.72
TRA2A-203ENST00000448549 RABL6Q3YEC7 729 aaPredicted RBP19.57■□□□□ 0.72
TRA2A-203ENST00000448549 SPDYE2Q495Y8 402 aa19.57■□□□□ 0.72
TRA2A-203ENST00000448549 LRRC24Q50LG9 513 aa19.57■□□□□ 0.72
TRA2A-203ENST00000448549 TDRD3Q9H7E2 651 aaKnown RBP19.57■□□□□ 0.72
TRA2A-203ENST00000448549 IQSEC3Q9UPP2 1182 aaPredicted RBP19.57■□□□□ 0.72
TRA2A-203ENST00000448549 CACNA1FO60840 1977 aa19.57■□□□□ 0.72
TRA2A-203ENST00000448549 IGF2BP3O00425 579 aaKnown RBP eCLIP19.56■□□□□ 0.72
TRA2A-203ENST00000448549 FBXO46Q6PJ61 603 aaPredicted RBP19.56■□□□□ 0.72
TRA2A-203ENST00000448549 FBXO33Q7Z6M2 555 aa19.56■□□□□ 0.72
TRA2A-203ENST00000448549 VPS37DQ86XT2 251 aa19.56■□□□□ 0.72
TRA2A-203ENST00000448549 DZIP1LQ8IYY4 767 aaKnown RBP19.56■□□□□ 0.72
TRA2A-203ENST00000448549 ANKRD44Q8N8A2 993 aa19.56■□□□□ 0.72
TRA2A-203ENST00000448549 TNFAIP1Q13829 316 aa19.55■□□□□ 0.72
TRA2A-203ENST00000448549 GRIK5Q16478 980 aa19.55■□□□□ 0.72
TRA2A-203ENST00000448549 METTL24Q5JXM2 366 aa19.55■□□□□ 0.72
TRA2A-203ENST00000448549 ANKRD13AQ8IZ07 590 aa19.55■□□□□ 0.72
TRA2A-203ENST00000448549 TCP10L2B9ZVM9 353 aa19.54■□□□□ 0.72
TRA2A-203ENST00000448549 SLC34A2O95436 690 aa19.54■□□□□ 0.72
TRA2A-203ENST00000448549 GJA5P36382 358 aa19.54■□□□□ 0.72
TRA2A-203ENST00000448549 CRKP46108 304 aa19.54■□□□□ 0.72
TRA2A-203ENST00000448549 CHAF1AQ13111 956 aaPredicted RBP19.54■□□□□ 0.72
TRA2A-203ENST00000448549 CDAN1Q8IWY9 1227 aa19.54■□□□□ 0.72
TRA2A-203ENST00000448549 KLHDC4Q8TBB5 520 aa19.54■□□□□ 0.72
TRA2A-203ENST00000448549 SSH1Q8WYL5 1049 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms