RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 DHX16O60231 1041 aaKnown RBP16.12■□□□□ 0.17
VPS52-212ENST00000445902 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
VPS52-212ENST00000445902 MARCKSP29966 332 aaPredicted RBP16.12■□□□□ 0.17
VPS52-212ENST00000445902 HOXC9P31274 260 aa16.12■□□□□ 0.17
VPS52-212ENST00000445902 LONRF2Q1L5Z9 754 aa16.12■□□□□ 0.17
VPS52-212ENST00000445902 LINC00301Q8NCQ3 95 aa16.12■□□□□ 0.17
VPS52-212ENST00000445902 FBXO18Q8NFZ0 1043 aa16.12■□□□□ 0.17
VPS52-212ENST00000445902 JCADQ9P266 1359 aa16.12■□□□□ 0.17
VPS52-212ENST00000445902 CARMIL3Q8ND23 1372 aa16.12■□□□□ 0.17
VPS52-212ENST00000445902 GRM8O00222 908 aa16.12■□□□□ 0.17
VPS52-212ENST00000445902 TUBB4AP04350 444 aa16.12■□□□□ 0.17
VPS52-212ENST00000445902 TOGARAM2Q6ZUX3 1019 aa16.12■□□□□ 0.17
VPS52-212ENST00000445902 GOLGA5Q8TBA6 731 aa16.12■□□□□ 0.17
VPS52-212ENST00000445902 IRX2Q9BZI1 471 aaPredicted RBP16.12■□□□□ 0.17
VPS52-212ENST00000445902 U3KPZ7 1027 aaPredicted RBP16.12■□□□□ 0.17
VPS52-212ENST00000445902 AGLP35573 1532 aa16.12■□□□□ 0.17
VPS52-212ENST00000445902 PSME1Q06323 249 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 DHX32Q7L7V1 743 aaKnown RBP16.11■□□□□ 0.17
VPS52-212ENST00000445902 BPIFA3Q9BQP9 254 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 PDE11AQ9HCR9 933 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 DBNLQ9UJU6 430 aaKnown RBP16.11■□□□□ 0.17
VPS52-212ENST00000445902 BTBD11A6QL63 1104 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 SPTLC2O15270 562 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 ZSCAN12O43309 604 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 ATP8B1O43520 1251 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 NOP2P46087 812 aaKnown RBP16.11■□□□□ 0.17
VPS52-212ENST00000445902 WWC2Q6AWC2 1192 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 MPRIPQ6WCQ1 1025 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 ATG3Q9NT62 314 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 RTEL1Q9NZ71 1219 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.11■□□□□ 0.17
VPS52-212ENST00000445902 N4BP1O75113 896 aaKnown RBP16.11■□□□□ 0.17
VPS52-212ENST00000445902 FDPSP14324 419 aaKnown RBP16.11■□□□□ 0.17
VPS52-212ENST00000445902 PFKFB1P16118 471 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 ADKP55263 362 aaKnown RBP16.11■□□□□ 0.17
VPS52-212ENST00000445902 MAP3K9P80192 1104 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 PAXIP1Q6ZW49 1069 aaPredicted RBP16.11■□□□□ 0.17
VPS52-212ENST00000445902 SUGCTQ9HAC7 445 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 PUF60Q9UHX1 559 aaKnown RBP16.11■□□□□ 0.17
VPS52-212ENST00000445902 MRFAP1Q9Y605 127 aa16.11■□□□□ 0.17
VPS52-212ENST00000445902 KSR2Q6VAB6 950 aa16.1■□□□□ 0.17
VPS52-212ENST00000445902 DBF4Q9UBU7 674 aaPredicted RBP16.1■□□□□ 0.17
VPS52-212ENST00000445902 MROH7-TTC4A0A0A0MT08 1334 aa16.1■□□□□ 0.17
VPS52-212ENST00000445902 ABCC6O95255 1503 aa16.1■□□□□ 0.17
VPS52-212ENST00000445902 PNOCQ13519 176 aa16.1■□□□□ 0.17
VPS52-212ENST00000445902 RSRC2Q7L4I2 434 aaKnown RBP16.1■□□□□ 0.17
VPS52-212ENST00000445902 C14orf37Q86TY3 774 aa16.1■□□□□ 0.17
VPS52-212ENST00000445902 FANCLQ9NW38 375 aa16.1■□□□□ 0.17
VPS52-212ENST00000445902 PDIA3P30101 505 aaKnown RBP16.09■□□□□ 0.17
VPS52-212ENST00000445902 ACTN2P35609 894 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 MCMDC2Q4G0Z9 681 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 TMEM139Q8IV31 216 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 CCDC12Q8WUD4 166 aaPredicted RBP16.09■□□□□ 0.17
VPS52-212ENST00000445902 EXOC4Q96A65 974 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 PLEKHA4Q9H4M7 779 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 A0A1W2PQ27 194 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 A0A1W2PQ64 194 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 A0A1W2PQD8 194 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 PHACTR2O75167 634 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 LEKR1Q6ZMV7 388 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 VSTM4Q8IW00 320 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 MPHOSPH8Q99549 860 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 EFCC1Q9HA90 598 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 BABAM1Q9NWV8 329 aa16.09■□□□□ 0.17
VPS52-212ENST00000445902 SKIDA1Q1XH10 827 aa16.08■□□□□ 0.17
VPS52-212ENST00000445902 EPHA10Q5JZY3 1008 aa16.08■□□□□ 0.17
VPS52-212ENST00000445902 ATL3Q6DD88 541 aa16.08■□□□□ 0.17
VPS52-212ENST00000445902 GOLGA1Q92805 767 aa16.08■□□□□ 0.17
VPS52-212ENST00000445902 BAG1Q99933 345 aaPredicted RBP16.08■□□□□ 0.17
VPS52-212ENST00000445902 TOMM22Q9NS69 142 aa16.08■□□□□ 0.17
VPS52-212ENST00000445902 TFRCP02786 760 aaKnown RBP16.08■□□□□ 0.16
VPS52-212ENST00000445902 TFCP2Q12800 502 aa16.08■□□□□ 0.16
VPS52-212ENST00000445902 NBPF6Q5VWK0 638 aa16.08■□□□□ 0.16
VPS52-212ENST00000445902 NBPF4Q96M43 638 aa16.08■□□□□ 0.16
VPS52-212ENST00000445902 SALL1Q9NSC2 1324 aa16.08■□□□□ 0.16
VPS52-212ENST00000445902 NEO1Q92859 1461 aa16.08■□□□□ 0.16
VPS52-212ENST00000445902 ARHGAP6O43182 974 aa16.08■□□□□ 0.16
VPS52-212ENST00000445902 MYL5Q02045 173 aa16.08■□□□□ 0.16
VPS52-212ENST00000445902 RABGGTAQ92696 567 aa16.08■□□□□ 0.16
VPS52-212ENST00000445902 C8orf76Q96K31 380 aa16.08■□□□□ 0.16
VPS52-212ENST00000445902 DBNDD2Q9BQY9 259 aa16.08■□□□□ 0.16
VPS52-212ENST00000445902 KIF28PB7ZC32 967 aa16.07■□□□□ 0.16
VPS52-212ENST00000445902 WDHD1O75717 1129 aaPredicted RBP16.07■□□□□ 0.16
VPS52-212ENST00000445902 GTF2A1P52655 376 aaPredicted RBP16.07■□□□□ 0.16
VPS52-212ENST00000445902 MTF1Q14872 753 aa16.07■□□□□ 0.16
VPS52-212ENST00000445902 KCNG4Q8TDN1 519 aa16.07■□□□□ 0.16
VPS52-212ENST00000445902 KIFC2Q96AC6 838 aa16.07■□□□□ 0.16
VPS52-212ENST00000445902 LZTFL1Q9NQ48 299 aa16.07■□□□□ 0.16
VPS52-212ENST00000445902 INTS13Q9NVM9 706 aa16.07■□□□□ 0.16
VPS52-212ENST00000445902 SYNE3Q6ZMZ3 975 aa16.07■□□□□ 0.16
VPS52-212ENST00000445902 FAN1Q9Y2M0 1017 aa16.07■□□□□ 0.16
VPS52-212ENST00000445902 TOPAZ1Q8N9V7 1692 aa16.07■□□□□ 0.16
VPS52-212ENST00000445902 RGPD8O14715 1765 aaPredicted RBP16.07■□□□□ 0.16
VPS52-212ENST00000445902 NWD1Q149M9 1564 aa16.06■□□□□ 0.16
VPS52-212ENST00000445902 A0A0U1RQJ8 604 aa16.06■□□□□ 0.16
VPS52-212ENST00000445902 E7EWF7 191 aa16.06■□□□□ 0.16
VPS52-212ENST00000445902 CBFA2T2O43439 604 aa16.06■□□□□ 0.16
VPS52-212ENST00000445902 TXLNAP40222 546 aa16.06■□□□□ 0.16
VPS52-212ENST00000445902 ATRIPQ8WXE1 791 aa16.06■□□□□ 0.16
VPS52-212ENST00000445902 IKBKBO14920 756 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms