RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 PAXIP1Q6ZW49 1069 aaPredicted RBP29.71■■■□□ 2.35
C9orf3-207ENST00000445181 KRT26Q7Z3Y9 468 aa29.71■■■□□ 2.35
C9orf3-207ENST00000445181 VPS37DQ86XT2 251 aa29.71■■■□□ 2.35
C9orf3-207ENST00000445181 PSME4Q14997 1843 aa29.71■■■□□ 2.35
C9orf3-207ENST00000445181 IFIT1P09914 478 aaKnown RBP29.7■■■□□ 2.35
C9orf3-207ENST00000445181 HIBADHP31937 336 aaKnown RBP29.7■■■□□ 2.35
C9orf3-207ENST00000445181 CAVIN4Q5BKX8 364 aa29.7■■■□□ 2.35
C9orf3-207ENST00000445181 DACT2Q5SW24 774 aa29.7■■■□□ 2.35
C9orf3-207ENST00000445181 COL13A1Q5TAT6 717 aaPredicted RBP29.7■■■□□ 2.35
C9orf3-207ENST00000445181 TTLL5Q6EMB2 1281 aa29.7■■■□□ 2.35
C9orf3-207ENST00000445181 DLK2Q6UY11 383 aa29.7■■■□□ 2.35
C9orf3-207ENST00000445181 SLC5A1P13866 664 aa29.69■■■□□ 2.34
C9orf3-207ENST00000445181 GTF2IP78347 998 aa29.69■■■□□ 2.34
C9orf3-207ENST00000445181 STRIP1Q5VSL9 837 aa29.69■■■□□ 2.34
C9orf3-207ENST00000445181 MXD3Q9BW11 206 aa29.69■■■□□ 2.34
C9orf3-207ENST00000445181 PCNTO95613 3336 aa29.69■■■□□ 2.34
C9orf3-207ENST00000445181 IL1R1P14778 569 aa29.68■■■□□ 2.34
C9orf3-207ENST00000445181 G3BP1Q13283 466 aaKnown RBP eCLIP29.68■■■□□ 2.34
C9orf3-207ENST00000445181 SAPCD2Q86UD0 394 aa29.68■■■□□ 2.34
C9orf3-207ENST00000445181 FAM84BQ96KN1 310 aaPredicted RBP29.68■■■□□ 2.34
C9orf3-207ENST00000445181 CAPNS2Q96L46 248 aa29.68■■■□□ 2.34
C9orf3-207ENST00000445181 ECE1P42892 770 aa29.67■■■□□ 2.34
C9orf3-207ENST00000445181 RRP1P56182 461 aaKnown RBP29.67■■■□□ 2.34
C9orf3-207ENST00000445181 ATP2B3Q16720 1220 aa29.67■■■□□ 2.34
C9orf3-207ENST00000445181 CYP4F22Q6NT55 531 aa29.67■■■□□ 2.34
C9orf3-207ENST00000445181 LPIN2Q92539 896 aa29.67■■■□□ 2.34
C9orf3-207ENST00000445181 MYOZ2Q9NPC6 264 aa29.67■■■□□ 2.34
C9orf3-207ENST00000445181 GGA3Q9NZ52 723 aa29.67■■■□□ 2.34
C9orf3-207ENST00000445181 ASTN2O75129 1339 aaPredicted RBP29.67■■■□□ 2.34
C9orf3-207ENST00000445181 ADM5C9JUS6 153 aa29.66■■■□□ 2.34
C9orf3-207ENST00000445181 FGFR2P21802 821 aa29.66■■■□□ 2.34
C9orf3-207ENST00000445181 GRM1Q13255 1194 aa29.66■■■□□ 2.34
C9orf3-207ENST00000445181 SCARF1Q14162 830 aa29.66■■■□□ 2.34
C9orf3-207ENST00000445181 POLA2Q14181 598 aa29.66■■■□□ 2.34
C9orf3-207ENST00000445181 CEP85Q6P2H3 762 aa29.66■■■□□ 2.34
C9orf3-207ENST00000445181 SSH3Q8TE77 659 aa29.66■■■□□ 2.34
C9orf3-207ENST00000445181 OS9Q13438 667 aaPredicted RBP29.65■■■□□ 2.34
C9orf3-207ENST00000445181 SULF1Q8IWU6 871 aa29.65■■■□□ 2.34
C9orf3-207ENST00000445181 ZBTB40Q9NUA8 1239 aa29.65■■■□□ 2.34
C9orf3-207ENST00000445181 MYO3BQ8WXR4 1341 aa29.65■■■□□ 2.34
C9orf3-207ENST00000445181 FOXN1O15353 648 aa29.64■■■□□ 2.34
C9orf3-207ENST00000445181 FRAT2O75474 233 aaPredicted RBP29.64■■■□□ 2.34
C9orf3-207ENST00000445181 TFCP2Q12800 502 aa29.64■■■□□ 2.34
C9orf3-207ENST00000445181 AIDAQ96BJ3 306 aa29.64■■■□□ 2.34
C9orf3-207ENST00000445181 WBP1LQ9NX94 342 aa29.64■■■□□ 2.34
C9orf3-207ENST00000445181 POLR2AP24928 1970 aaKnown RBP29.63■■■□□ 2.33
C9orf3-207ENST00000445181 ANGEL2Q5VTE6 544 aaKnown RBP29.63■■■□□ 2.33
C9orf3-207ENST00000445181 FBXO33Q7Z6M2 555 aa29.63■■■□□ 2.33
C9orf3-207ENST00000445181 OGFOD1Q8N543 542 aa29.63■■■□□ 2.33
C9orf3-207ENST00000445181 JAG2Q9Y219 1238 aa29.63■■■□□ 2.33
C9orf3-207ENST00000445181 SURF6O75683 361 aaKnown RBP29.62■■■□□ 2.33
C9orf3-207ENST00000445181 BCAMP50895 628 aa29.62■■■□□ 2.33
C9orf3-207ENST00000445181 TDRD7Q8NHU6 1098 aaKnown RBP29.62■■■□□ 2.33
C9orf3-207ENST00000445181 AKAP2Q9Y2D5 859 aa29.62■■■□□ 2.33
C9orf3-207ENST00000445181 SASH1O94885 1247 aa29.61■■■□□ 2.33
C9orf3-207ENST00000445181 MAP2K1Q02750 393 aaPredicted RBP29.61■■■□□ 2.33
C9orf3-207ENST00000445181 HHIPL1Q96JK4 782 aa29.61■■■□□ 2.33
C9orf3-207ENST00000445181 IQSEC3Q9UPP2 1182 aaPredicted RBP29.61■■■□□ 2.33
C9orf3-207ENST00000445181 RPAP2Q8IXW5 612 aaPredicted RBP29.59■■■□□ 2.33
C9orf3-207ENST00000445181 ZNF646O15015 1829 aaPredicted RBP29.58■■■□□ 2.33
C9orf3-207ENST00000445181 CTCFP49711 727 aaPredicted RBP29.58■■■□□ 2.33
C9orf3-207ENST00000445181 HUNKP57058 714 aa29.58■■■□□ 2.33
C9orf3-207ENST00000445181 NBPF9Q3BBW0 867 aa29.58■■■□□ 2.33
C9orf3-207ENST00000445181 KIAA0825Q8IV33 1275 aa29.58■■■□□ 2.33
C9orf3-207ENST00000445181 C2orf69Q8N8R5 385 aa29.58■■■□□ 2.33
C9orf3-207ENST00000445181 GBA2Q9HCG7 927 aaPredicted RBP29.58■■■□□ 2.33
C9orf3-207ENST00000445181 AOC2O75106 756 aa29.57■■■□□ 2.32
C9orf3-207ENST00000445181 HMMRO75330 724 aa29.57■■■□□ 2.32
C9orf3-207ENST00000445181 MMP14P50281 582 aa29.57■■■□□ 2.32
C9orf3-207ENST00000445181 TIMM10P62072 90 aa29.57■■■□□ 2.32
C9orf3-207ENST00000445181 CHAF1AQ13111 956 aaPredicted RBP29.57■■■□□ 2.32
C9orf3-207ENST00000445181 HDAC9Q9UKV0 1011 aa29.57■■■□□ 2.32
C9orf3-207ENST00000445181 FAM205AQ6ZU69 1335 aa29.56■■■□□ 2.32
C9orf3-207ENST00000445181 PITPNM2Q9BZ72 1349 aa29.56■■■□□ 2.32
C9orf3-207ENST00000445181 A0A1B0GUL7 405 aa29.56■■■□□ 2.32
C9orf3-207ENST00000445181 MAP2K2P36507 400 aa29.56■■■□□ 2.32
C9orf3-207ENST00000445181 CDCA5Q96FF9 252 aa29.56■■■□□ 2.32
C9orf3-207ENST00000445181 NEUROD6Q96NK8 337 aa29.56■■■□□ 2.32
C9orf3-207ENST00000445181 GNL3LQ9NVN8 582 aaKnown RBP29.56■■■□□ 2.32
C9orf3-207ENST00000445181 WNT10BO00744 389 aa29.55■■■□□ 2.32
C9orf3-207ENST00000445181 FKBP1AP62942 108 aaKnown RBP29.55■■■□□ 2.32
C9orf3-207ENST00000445181 MFSD14BQ5SR56 506 aa29.55■■■□□ 2.32
C9orf3-207ENST00000445181 TNS4Q8IZW8 715 aa29.55■■■□□ 2.32
C9orf3-207ENST00000445181 CERS5Q8N5B7 392 aa29.55■■■□□ 2.32
C9orf3-207ENST00000445181 NOP58Q9Y2X3 529 aaKnown RBP29.55■■■□□ 2.32
C9orf3-207ENST00000445181 F8W031 263 aaPredicted RBP29.54■■■□□ 2.32
C9orf3-207ENST00000445181 ADORA1P30542 326 aa29.54■■■□□ 2.32
C9orf3-207ENST00000445181 SCAF8Q9UPN6 1271 aaKnown RBP29.53■■■□□ 2.32
C9orf3-207ENST00000445181 EXOC6BQ9Y2D4 811 aa29.53■■■□□ 2.32
C9orf3-207ENST00000445181 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.53■■■□□ 2.32
C9orf3-207ENST00000445181 GORABQ5T7V8 394 aa29.52■■■□□ 2.32
C9orf3-207ENST00000445181 XAGE2Q96GT9 111 aa29.52■■■□□ 2.32
C9orf3-207ENST00000445181 BEGAINQ9BUH8 593 aa29.52■■■□□ 2.32
C9orf3-207ENST00000445181 PRDM10Q9NQV6 1147 aa29.52■■■□□ 2.32
C9orf3-207ENST00000445181 THSD7BQ9C0I4 1608 aa29.52■■■□□ 2.32
C9orf3-207ENST00000445181 HSP90AB4PQ58FF6 505 aa29.51■■■□□ 2.31
C9orf3-207ENST00000445181 TBC1D22AQ8WUA7 517 aa29.51■■■□□ 2.31
C9orf3-207ENST00000445181 PHKA1P46020 1223 aa29.5■■■□□ 2.31
C9orf3-207ENST00000445181 LBX1P52954 281 aa29.5■■■□□ 2.31
C9orf3-207ENST00000445181 CCDC102BQ68D86 513 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms