RNA–Protein interactions for RNA: ENST00000442447.5

RBM39-215, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-215ENST00000442447 SCAF8Q9UPN6 1271 aaKnown RBP20.21■□□□□ 0.83
RBM39-215ENST00000442447 F8W031 263 aaPredicted RBP20.2■□□□□ 0.82
RBM39-215ENST00000442447 MMP14P50281 582 aa20.2■□□□□ 0.82
RBM39-215ENST00000442447 FKBP1AP62942 108 aaKnown RBP20.2■□□□□ 0.82
RBM39-215ENST00000442447 GRM1Q13255 1194 aa20.2■□□□□ 0.82
RBM39-215ENST00000442447 PUM3Q15397 648 aaKnown RBP20.2■□□□□ 0.82
RBM39-215ENST00000442447 CYP4F22Q6NT55 531 aa20.2■□□□□ 0.82
RBM39-215ENST00000442447 ATG9AQ7Z3C6 839 aa20.2■□□□□ 0.82
RBM39-215ENST00000442447 FBXO33Q7Z6M2 555 aa20.2■□□□□ 0.82
RBM39-215ENST00000442447 VPS37DQ86XT2 251 aa20.2■□□□□ 0.82
RBM39-215ENST00000442447 TMEM57Q8N5G2 664 aa20.2■□□□□ 0.82
RBM39-215ENST00000442447 PA2G4Q9UQ80 394 aaKnown RBP20.2■□□□□ 0.82
RBM39-215ENST00000442447 PITPNM2Q9BZ72 1349 aa20.2■□□□□ 0.82
RBM39-215ENST00000442447 WDR33Q9C0J8 1336 aaKnown RBP20.2■□□□□ 0.82
RBM39-215ENST00000442447 CAVIN4Q5BKX8 364 aa20.19■□□□□ 0.82
RBM39-215ENST00000442447 CDCA5Q96FF9 252 aa20.19■□□□□ 0.82
RBM39-215ENST00000442447 CAPNS2Q96L46 248 aa20.19■□□□□ 0.82
RBM39-215ENST00000442447 IQSEC3Q9UPP2 1182 aaPredicted RBP20.19■□□□□ 0.82
RBM39-215ENST00000442447 FAM205AQ6ZU69 1335 aa20.19■□□□□ 0.82
RBM39-215ENST00000442447 CIAO1O76071 339 aa20.18■□□□□ 0.82
RBM39-215ENST00000442447 IFIT1P09914 478 aaKnown RBP20.18■□□□□ 0.82
RBM39-215ENST00000442447 FGFR2P21802 821 aa20.18■□□□□ 0.82
RBM39-215ENST00000442447 FBXO3Q9UK99 471 aa20.18■□□□□ 0.82
RBM39-215ENST00000442447 ECE1P42892 770 aa20.17■□□□□ 0.82
RBM39-215ENST00000442447 BCAMP50895 628 aa20.17■□□□□ 0.82
RBM39-215ENST00000442447 MFSD14BQ5SR56 506 aa20.17■□□□□ 0.82
RBM39-215ENST00000442447 ZBED3Q96IU2 234 aaPredicted RBP20.17■□□□□ 0.82
RBM39-215ENST00000442447 GBA2Q9HCG7 927 aaPredicted RBP20.17■□□□□ 0.82
RBM39-215ENST00000442447 SRGAP3O43295 1099 aa20.16■□□□□ 0.82
RBM39-215ENST00000442447 FRAT2O75474 233 aaPredicted RBP20.16■□□□□ 0.82
RBM39-215ENST00000442447 GNAI2P04899 355 aa20.16■□□□□ 0.82
RBM39-215ENST00000442447 SLC5A1P13866 664 aa20.16■□□□□ 0.82
RBM39-215ENST00000442447 HUNKP57058 714 aa20.16■□□□□ 0.82
RBM39-215ENST00000442447 CHAF1AQ13111 956 aaPredicted RBP20.16■□□□□ 0.82
RBM39-215ENST00000442447 DLGAP5Q15398 846 aa20.16■□□□□ 0.82
RBM39-215ENST00000442447 FTSJ3Q8IY81 847 aaKnown RBP20.16■□□□□ 0.82
RBM39-215ENST00000442447 C2orf69Q8N8R5 385 aa20.16■□□□□ 0.82
RBM39-215ENST00000442447 HHIPL1Q96JK4 782 aa20.16■□□□□ 0.82
RBM39-215ENST00000442447 COPRSQ9NQ92 184 aa20.16■□□□□ 0.82
RBM39-215ENST00000442447 PCDHAC2Q9Y5I4 1007 aa20.16■□□□□ 0.82
RBM39-215ENST00000442447 IL15P40933 162 aaPredicted RBP20.15■□□□□ 0.82
RBM39-215ENST00000442447 MTX1Q13505 466 aa20.15■□□□□ 0.82
RBM39-215ENST00000442447 CFAP100Q494V2 611 aa20.15■□□□□ 0.82
RBM39-215ENST00000442447 DZIP1LQ8IYY4 767 aaKnown RBP20.15■□□□□ 0.82
RBM39-215ENST00000442447 LPIN2Q92539 896 aa20.15■□□□□ 0.82
RBM39-215ENST00000442447 CEP126Q9P2H0 1117 aa20.15■□□□□ 0.82
RBM39-215ENST00000442447 RLBP1P12271 317 aa20.14■□□□□ 0.81
RBM39-215ENST00000442447 PRAMEF18Q5VWM3 479 aa20.14■□□□□ 0.81
RBM39-215ENST00000442447 MTMR14Q8NCE2 650 aa20.14■□□□□ 0.81
RBM39-215ENST00000442447 THSD7BQ9C0I4 1608 aa20.13■□□□□ 0.81
RBM39-215ENST00000442447 AOC2O75106 756 aa20.13■□□□□ 0.81
RBM39-215ENST00000442447 ATP2B3Q16720 1220 aa20.13■□□□□ 0.81
RBM39-215ENST00000442447 APOBEC3FQ8IUX4 373 aaKnown RBP20.13■□□□□ 0.81
RBM39-215ENST00000442447 ITPRIPQ8IWB1 547 aa20.13■□□□□ 0.81
RBM39-215ENST00000442447 TTF2Q9UNY4 1162 aaKnown RBP20.13■□□□□ 0.81
RBM39-215ENST00000442447 ARAP2Q8WZ64 1704 aa20.13■□□□□ 0.81
RBM39-215ENST00000442447 SPDYE2BA6NHP3 402 aa20.12■□□□□ 0.81
RBM39-215ENST00000442447 SPDYE6P0CI01 402 aa20.12■□□□□ 0.81
RBM39-215ENST00000442447 RBM5P52756 815 aaKnown RBP eCLIP20.12■□□□□ 0.81
RBM39-215ENST00000442447 GRIK5Q16478 980 aa20.12■□□□□ 0.81
RBM39-215ENST00000442447 WBP1LQ9NX94 342 aa20.12■□□□□ 0.81
RBM39-215ENST00000442447 AOX1Q06278 1338 aa20.11■□□□□ 0.81
RBM39-215ENST00000442447 PNMA6EA0A0J9YXQ4 647 aa20.11■□□□□ 0.81
RBM39-215ENST00000442447 CLRN2A0PK11 232 aa20.11■□□□□ 0.81
RBM39-215ENST00000442447 FOXN1O15353 648 aa20.11■□□□□ 0.81
RBM39-215ENST00000442447 TBC1D22AQ8WUA7 517 aa20.11■□□□□ 0.81
RBM39-215ENST00000442447 AIDAQ96BJ3 306 aa20.11■□□□□ 0.81
RBM39-215ENST00000442447 PRMT6Q96LA8 375 aaPredicted RBP20.11■□□□□ 0.81
RBM39-215ENST00000442447 MYO1BO43795 1136 aa20.1■□□□□ 0.81
RBM39-215ENST00000442447 MAP2K1Q02750 393 aaPredicted RBP20.1■□□□□ 0.81
RBM39-215ENST00000442447 RGMBQ6NW40 437 aa20.1■□□□□ 0.81
RBM39-215ENST00000442447 C1orf115Q9H7X2 142 aa20.1■□□□□ 0.81
RBM39-215ENST00000442447 PAPPA2Q9BXP8 1791 aa20.09■□□□□ 0.81
RBM39-215ENST00000442447 SERPINA10Q9UK55 444 aa20.09■□□□□ 0.81
RBM39-215ENST00000442447 COL1A1P02452 1464 aaPredicted RBP20.09■□□□□ 0.81
RBM39-215ENST00000442447 ADORA1P30542 326 aa20.08■□□□□ 0.81
RBM39-215ENST00000442447 MAP2K2P36507 400 aa20.08■□□□□ 0.81
RBM39-215ENST00000442447 TFCP2Q12800 502 aa20.08■□□□□ 0.81
RBM39-215ENST00000442447 COL13A1Q5TAT6 717 aaPredicted RBP20.08■□□□□ 0.81
RBM39-215ENST00000442447 MOB2Q70IA6 237 aa20.08■□□□□ 0.81
RBM39-215ENST00000442447 PANK1Q8TE04 598 aa20.08■□□□□ 0.81
RBM39-215ENST00000442447 VEZTQ9HBM0 779 aa20.08■□□□□ 0.81
RBM39-215ENST00000442447 ECM29Q5VYK3 1845 aa20.07■□□□□ 0.8
RBM39-215ENST00000442447 NF2P35240 595 aa20.07■□□□□ 0.8
RBM39-215ENST00000442447 PHKA1P46020 1223 aa20.07■□□□□ 0.8
RBM39-215ENST00000442447 CRKP46108 304 aa20.07■□□□□ 0.8
RBM39-215ENST00000442447 ZNF157P51786 506 aaPredicted RBP20.07■□□□□ 0.8
RBM39-215ENST00000442447 FKBP1BP68106 108 aa20.07■□□□□ 0.8
RBM39-215ENST00000442447 DEFB129Q9H1M3 183 aa20.07■□□□□ 0.8
RBM39-215ENST00000442447 FAM155AB1AL88 458 aaPredicted RBP20.06■□□□□ 0.8
RBM39-215ENST00000442447 ZBTB7BO15156 539 aaPredicted RBP20.06■□□□□ 0.8
RBM39-215ENST00000442447 CTCFP49711 727 aaPredicted RBP20.06■□□□□ 0.8
RBM39-215ENST00000442447 TIMM10P62072 90 aa20.06■□□□□ 0.8
RBM39-215ENST00000442447 NOGQ13253 232 aa20.06■□□□□ 0.8
RBM39-215ENST00000442447 TTLL12Q14166 644 aaPredicted RBP20.06■□□□□ 0.8
RBM39-215ENST00000442447 ZIC5Q96T25 663 aa20.06■□□□□ 0.8
RBM39-215ENST00000442447 GNL3LQ9NVN8 582 aaKnown RBP20.06■□□□□ 0.8
RBM39-215ENST00000442447 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.06■□□□□ 0.8
RBM39-215ENST00000442447 A0A1B0GUL7 405 aa20.05■□□□□ 0.8
RBM39-215ENST00000442447 UBE2Q2LH0YL09 131 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms