RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 PTPN12Q05209 780 aaKnown RBP25.97■■□□□ 1.75
VIL1-204ENST00000440053 TDRD7Q8NHU6 1098 aaKnown RBP25.97■■□□□ 1.75
VIL1-204ENST00000440053 PDE8BO95263 885 aa25.96■■□□□ 1.75
VIL1-204ENST00000440053 HDAC9Q9UKV0 1011 aa25.96■■□□□ 1.75
VIL1-204ENST00000440053 IQSEC3Q9UPP2 1182 aaPredicted RBP25.96■■□□□ 1.75
VIL1-204ENST00000440053 KIF16BQ96L93 1317 aa25.95■■□□□ 1.75
VIL1-204ENST00000440053 INTS3Q68E01 1043 aaKnown RBP25.95■■□□□ 1.74
VIL1-204ENST00000440053 C2orf69Q8N8R5 385 aa25.95■■□□□ 1.74
VIL1-204ENST00000440053 TRIM27P14373 513 aa25.94■■□□□ 1.74
VIL1-204ENST00000440053 IFFO2Q5TF58 517 aa25.94■■□□□ 1.74
VIL1-204ENST00000440053 CLUAP1Q96AJ1 413 aa25.94■■□□□ 1.74
VIL1-204ENST00000440053 ZBED3Q96IU2 234 aaPredicted RBP25.94■■□□□ 1.74
VIL1-204ENST00000440053 ZIC5Q96T25 663 aa25.94■■□□□ 1.74
VIL1-204ENST00000440053 SIL1Q9H173 461 aa25.94■■□□□ 1.74
VIL1-204ENST00000440053 PITPNM2Q9BZ72 1349 aa25.94■■□□□ 1.74
VIL1-204ENST00000440053 EYA2O00167 538 aa25.93■■□□□ 1.74
VIL1-204ENST00000440053 ATG9AQ7Z3C6 839 aa25.93■■□□□ 1.74
VIL1-204ENST00000440053 FBXO33Q7Z6M2 555 aa25.93■■□□□ 1.74
VIL1-204ENST00000440053 HHIPL1Q96JK4 782 aa25.93■■□□□ 1.74
VIL1-204ENST00000440053 AIDAQ96BJ3 306 aa25.92■■□□□ 1.74
VIL1-204ENST00000440053 PA2G4Q9UQ80 394 aaKnown RBP25.92■■□□□ 1.74
VIL1-204ENST00000440053 IPO8O15397 1037 aaKnown RBP25.91■■□□□ 1.74
VIL1-204ENST00000440053 BCAMP50895 628 aa25.91■■□□□ 1.74
VIL1-204ENST00000440053 DLGAP5Q15398 846 aa25.91■■□□□ 1.74
VIL1-204ENST00000440053 ATF7IPQ6VMQ6 1270 aa25.91■■□□□ 1.74
VIL1-204ENST00000440053 MOB2Q70IA6 237 aa25.91■■□□□ 1.74
VIL1-204ENST00000440053 AOX1Q06278 1338 aa25.91■■□□□ 1.74
VIL1-204ENST00000440053 FAM205AQ6ZU69 1335 aa25.91■■□□□ 1.74
VIL1-204ENST00000440053 FGFR2P21802 821 aa25.91■■□□□ 1.74
VIL1-204ENST00000440053 FKBP1AP62942 108 aaKnown RBP25.91■■□□□ 1.74
VIL1-204ENST00000440053 MAP2K1Q02750 393 aaPredicted RBP25.91■■□□□ 1.74
VIL1-204ENST00000440053 MMP14P50281 582 aa25.9■■□□□ 1.74
VIL1-204ENST00000440053 GRIK5Q16478 980 aa25.9■■□□□ 1.74
VIL1-204ENST00000440053 CFAP100Q494V2 611 aa25.9■■□□□ 1.74
VIL1-204ENST00000440053 VPS37DQ86XT2 251 aa25.9■■□□□ 1.74
VIL1-204ENST00000440053 PRMT6Q96LA8 375 aaPredicted RBP25.9■■□□□ 1.74
VIL1-204ENST00000440053 MAP2K2P36507 400 aa25.89■■□□□ 1.73
VIL1-204ENST00000440053 CHAF1AQ13111 956 aaPredicted RBP25.89■■□□□ 1.73
VIL1-204ENST00000440053 MFSD14BQ5SR56 506 aa25.89■■□□□ 1.73
VIL1-204ENST00000440053 RGMBQ6NW40 437 aa25.89■■□□□ 1.73
VIL1-204ENST00000440053 LBX1P52954 281 aa25.88■■□□□ 1.73
VIL1-204ENST00000440053 CAVIN4Q5BKX8 364 aa25.88■■□□□ 1.73
VIL1-204ENST00000440053 FAM155AB1AL88 458 aaPredicted RBP25.87■■□□□ 1.73
VIL1-204ENST00000440053 CTCFP49711 727 aaPredicted RBP25.87■■□□□ 1.73
VIL1-204ENST00000440053 ZNF157P51786 506 aaPredicted RBP25.87■■□□□ 1.73
VIL1-204ENST00000440053 PUM3Q15397 648 aaKnown RBP25.87■■□□□ 1.73
VIL1-204ENST00000440053 MTMR14Q8NCE2 650 aa25.87■■□□□ 1.73
VIL1-204ENST00000440053 CLRN2A0PK11 232 aa25.86■■□□□ 1.73
VIL1-204ENST00000440053 FRAT2O75474 233 aaPredicted RBP25.86■■□□□ 1.73
VIL1-204ENST00000440053 RBM5P52756 815 aaKnown RBP eCLIP25.86■■□□□ 1.73
VIL1-204ENST00000440053 TSKSQ9UJT2 592 aa25.86■■□□□ 1.73
VIL1-204ENST00000440053 UBE2Q2LH0YL09 131 aa25.85■■□□□ 1.73
VIL1-204ENST00000440053 GNAI3P08754 354 aa25.85■■□□□ 1.73
VIL1-204ENST00000440053 HSPA8P11142 646 aaKnown RBP25.85■■□□□ 1.73
VIL1-204ENST00000440053 TMEM57Q8N5G2 664 aa25.85■■□□□ 1.73
VIL1-204ENST00000440053 TTF2Q9UNY4 1162 aaKnown RBP25.85■■□□□ 1.73
VIL1-204ENST00000440053 SPDYE2BA6NHP3 402 aa25.85■■□□□ 1.73
VIL1-204ENST00000440053 IFIT1P09914 478 aaKnown RBP25.85■■□□□ 1.73
VIL1-204ENST00000440053 SPDYE6P0CI01 402 aa25.85■■□□□ 1.73
VIL1-204ENST00000440053 PRKG1Q13976 671 aa25.85■■□□□ 1.73
VIL1-204ENST00000440053 ZKSCAN2Q63HK3 967 aa25.85■■□□□ 1.73
VIL1-204ENST00000440053 TNS4Q8IZW8 715 aa25.85■■□□□ 1.73
VIL1-204ENST00000440053 HDAC5Q9UQL6 1122 aa25.85■■□□□ 1.73
VIL1-204ENST00000440053 ZBED9Q6R2W3 1325 aa25.84■■□□□ 1.73
VIL1-204ENST00000440053 CIAO1O76071 339 aa25.84■■□□□ 1.73
VIL1-204ENST00000440053 LPIN2Q92539 896 aa25.84■■□□□ 1.73
VIL1-204ENST00000440053 CEP126Q9P2H0 1117 aa25.84■■□□□ 1.73
VIL1-204ENST00000440053 FZD1Q9UP38 647 aa25.84■■□□□ 1.73
VIL1-204ENST00000440053 APOBEC3FQ8IUX4 373 aaKnown RBP25.83■■□□□ 1.73
VIL1-204ENST00000440053 DEFB129Q9H1M3 183 aa25.83■■□□□ 1.73
VIL1-204ENST00000440053 COPRSQ9NQ92 184 aa25.83■■□□□ 1.73
VIL1-204ENST00000440053 THSD7BQ9C0I4 1608 aa25.82■■□□□ 1.72
VIL1-204ENST00000440053 SRGAP3O43295 1099 aa25.82■■□□□ 1.72
VIL1-204ENST00000440053 SLC5A1P13866 664 aa25.82■■□□□ 1.72
VIL1-204ENST00000440053 NOGQ13253 232 aa25.82■■□□□ 1.72
VIL1-204ENST00000440053 TTLL12Q14166 644 aaPredicted RBP25.82■■□□□ 1.72
VIL1-204ENST00000440053 BEGAINQ9BUH8 593 aa25.82■■□□□ 1.72
VIL1-204ENST00000440053 KIF23Q02241 960 aaPredicted RBP25.81■■□□□ 1.72
VIL1-204ENST00000440053 CCDC102AQ96A19 550 aa25.81■■□□□ 1.72
VIL1-204ENST00000440053 VEZTQ9HBM0 779 aa25.81■■□□□ 1.72
VIL1-204ENST00000440053 PRDM10Q9NQV6 1147 aa25.81■■□□□ 1.72
VIL1-204ENST00000440053 FBXO3Q9UK99 471 aa25.81■■□□□ 1.72
VIL1-204ENST00000440053 IL15P40933 162 aaPredicted RBP25.8■■□□□ 1.72
VIL1-204ENST00000440053 ATP2B3Q16720 1220 aa25.8■■□□□ 1.72
VIL1-204ENST00000440053 TDRD3Q9H7E2 651 aaKnown RBP25.8■■□□□ 1.72
VIL1-204ENST00000440053 GNAI2P04899 355 aa25.79■■□□□ 1.72
VIL1-204ENST00000440053 FKBP1BP68106 108 aa25.79■■□□□ 1.72
VIL1-204ENST00000440053 SERPINA10Q9UK55 444 aa25.79■■□□□ 1.72
VIL1-204ENST00000440053 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.79■■□□□ 1.72
VIL1-204ENST00000440053 PNMA6EA0A0J9YXQ4 647 aa25.79■■□□□ 1.72
VIL1-204ENST00000440053 MYO1BO43795 1136 aa25.79■■□□□ 1.72
VIL1-204ENST00000440053 SLC10A3P09131 477 aa25.79■■□□□ 1.72
VIL1-204ENST00000440053 RLBP1P12271 317 aa25.79■■□□□ 1.72
VIL1-204ENST00000440053 CRKP46108 304 aa25.79■■□□□ 1.72
VIL1-204ENST00000440053 DZIP1LQ8IYY4 767 aaKnown RBP25.79■■□□□ 1.72
VIL1-204ENST00000440053 ADORA1P30542 326 aa25.78■■□□□ 1.72
VIL1-204ENST00000440053 TIMM10P62072 90 aa25.78■■□□□ 1.72
VIL1-204ENST00000440053 MTX1Q13505 466 aa25.78■■□□□ 1.72
VIL1-204ENST00000440053 RASAL3Q86YV0 1011 aa25.78■■□□□ 1.72
VIL1-204ENST00000440053 ZNF70Q9UC06 446 aaPredicted RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms