RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 MROH5Q6ZUA9 1318 aa23.19■■□□□ 1.3
AC004540.1-201ENST00000439120 CERS5Q8N5B7 392 aa23.19■■□□□ 1.3
AC004540.1-201ENST00000439120 PUS3Q9BZE2 481 aaKnown RBP23.19■■□□□ 1.3
AC004540.1-201ENST00000439120 JAG2Q9Y219 1238 aa23.19■■□□□ 1.3
AC004540.1-201ENST00000439120 CCER2I3L3R5 266 aa23.18■■□□□ 1.3
AC004540.1-201ENST00000439120 MYO1BO43795 1136 aa23.18■■□□□ 1.3
AC004540.1-201ENST00000439120 FKBP1AP62942 108 aaKnown RBP23.18■■□□□ 1.3
AC004540.1-201ENST00000439120 RABL6Q3YEC7 729 aaPredicted RBP23.18■■□□□ 1.3
AC004540.1-201ENST00000439120 RASAL3Q86YV0 1011 aa23.18■■□□□ 1.3
AC004540.1-201ENST00000439120 HIBADHP31937 336 aaKnown RBP23.17■■□□□ 1.3
AC004540.1-201ENST00000439120 METTL24Q5JXM2 366 aa23.17■■□□□ 1.3
AC004540.1-201ENST00000439120 MOB2Q70IA6 237 aa23.17■■□□□ 1.3
AC004540.1-201ENST00000439120 VPS37DQ86XT2 251 aa23.17■■□□□ 1.3
AC004540.1-201ENST00000439120 ABHD8Q96I13 439 aa23.17■■□□□ 1.3
AC004540.1-201ENST00000439120 AKAP11Q9UKA4 1901 aa23.16■■□□□ 1.3
AC004540.1-201ENST00000439120 UBE2Q2LH0YL09 131 aa23.16■■□□□ 1.3
AC004540.1-201ENST00000439120 GYG1P46976 350 aa23.16■■□□□ 1.3
AC004540.1-201ENST00000439120 RBM5P52756 815 aaKnown RBP eCLIP23.16■■□□□ 1.3
AC004540.1-201ENST00000439120 REM2Q8IYK8 340 aaPredicted RBP23.16■■□□□ 1.3
AC004540.1-201ENST00000439120 ANKRD44Q8N8A2 993 aa23.16■■□□□ 1.3
AC004540.1-201ENST00000439120 ZBED3Q96IU2 234 aaPredicted RBP23.16■■□□□ 1.3
AC004540.1-201ENST00000439120 SAGE1Q9NXZ1 904 aa23.16■■□□□ 1.3
AC004540.1-201ENST00000439120 RIPOR2Q9Y4F9 1068 aa23.16■■□□□ 1.3
AC004540.1-201ENST00000439120 ECM29Q5VYK3 1845 aa23.15■■□□□ 1.3
AC004540.1-201ENST00000439120 CT47B1P0C2W7 299 aaPredicted RBP23.15■■□□□ 1.3
AC004540.1-201ENST00000439120 CFAP100Q494V2 611 aa23.15■■□□□ 1.3
AC004540.1-201ENST00000439120 ARMC9Q7Z3E5 817 aa23.15■■□□□ 1.3
AC004540.1-201ENST00000439120 MTMR14Q8NCE2 650 aa23.15■■□□□ 1.3
AC004540.1-201ENST00000439120 USP44Q9H0E7 712 aa23.15■■□□□ 1.3
AC004540.1-201ENST00000439120 COL1A1P02452 1464 aaPredicted RBP23.15■■□□□ 1.3
AC004540.1-201ENST00000439120 CASP8AP2Q9UKL3 1982 aa23.14■■□□□ 1.3
AC004540.1-201ENST00000439120 TRPA1O75762 1119 aa23.14■■□□□ 1.29
AC004540.1-201ENST00000439120 PRKG1Q13976 671 aa23.14■■□□□ 1.29
AC004540.1-201ENST00000439120 MFSD14BQ5SR56 506 aa23.14■■□□□ 1.29
AC004540.1-201ENST00000439120 TDRD7Q8NHU6 1098 aaKnown RBP23.14■■□□□ 1.29
AC004540.1-201ENST00000439120 FAM205AQ6ZU69 1335 aa23.13■■□□□ 1.29
AC004540.1-201ENST00000439120 FRAT2O75474 233 aaPredicted RBP23.13■■□□□ 1.29
AC004540.1-201ENST00000439120 LRRC24Q50LG9 513 aa23.13■■□□□ 1.29
AC004540.1-201ENST00000439120 CAVIN4Q5BKX8 364 aa23.13■■□□□ 1.29
AC004540.1-201ENST00000439120 FAM84BQ96KN1 310 aaPredicted RBP23.13■■□□□ 1.29
AC004540.1-201ENST00000439120 CSRNP1Q96S65 589 aa23.13■■□□□ 1.29
AC004540.1-201ENST00000439120 DEFB129Q9H1M3 183 aa23.13■■□□□ 1.29
AC004540.1-201ENST00000439120 RNF186Q9NXI6 227 aa23.13■■□□□ 1.29
AC004540.1-201ENST00000439120 CLRN2A0PK11 232 aa23.12■■□□□ 1.29
AC004540.1-201ENST00000439120 SPDYE2BA6NHP3 402 aa23.12■■□□□ 1.29
AC004540.1-201ENST00000439120 SPDYE6P0CI01 402 aa23.12■■□□□ 1.29
AC004540.1-201ENST00000439120 TRMT2AQ8IZ69 625 aaKnown RBP23.12■■□□□ 1.29
AC004540.1-201ENST00000439120 VEZTQ9HBM0 779 aa23.12■■□□□ 1.29
AC004540.1-201ENST00000439120 PPP2R3BQ9Y5P8 575 aa23.12■■□□□ 1.29
AC004540.1-201ENST00000439120 KLHDC4Q8TBB5 520 aa23.11■■□□□ 1.29
AC004540.1-201ENST00000439120 TTF2Q9UNY4 1162 aaKnown RBP23.11■■□□□ 1.29
AC004540.1-201ENST00000439120 ARAP2Q8WZ64 1704 aa23.11■■□□□ 1.29
AC004540.1-201ENST00000439120 PDE8BO95263 885 aa23.1■■□□□ 1.29
AC004540.1-201ENST00000439120 PRMT6Q96LA8 375 aaPredicted RBP23.1■■□□□ 1.29
AC004540.1-201ENST00000439120 NOB1Q9ULX3 412 aaKnown RBP23.1■■□□□ 1.29
AC004540.1-201ENST00000439120 ANGEL1Q9UNK9 670 aaKnown RBP23.1■■□□□ 1.29
AC004540.1-201ENST00000439120 PCDHAC2Q9Y5I4 1007 aa23.1■■□□□ 1.29
AC004540.1-201ENST00000439120 UBTFL1P0CB47 393 aaPredicted RBP23.09■■□□□ 1.29
AC004540.1-201ENST00000439120 CHAF1AQ13111 956 aaPredicted RBP23.09■■□□□ 1.29
AC004540.1-201ENST00000439120 DGKZQ13574 1117 aa23.09■■□□□ 1.29
AC004540.1-201ENST00000439120 API5Q9BZZ5 524 aaKnown RBP23.09■■□□□ 1.29
AC004540.1-201ENST00000439120 IQSEC3Q9UPP2 1182 aaPredicted RBP23.09■■□□□ 1.29
AC004540.1-201ENST00000439120 CCDC85CA6NKD9 419 aa23.08■■□□□ 1.29
AC004540.1-201ENST00000439120 PPP1R12BO60237 982 aaPredicted RBP23.08■■□□□ 1.29
AC004540.1-201ENST00000439120 IFIT1P09914 478 aaKnown RBP23.08■■□□□ 1.29
AC004540.1-201ENST00000439120 SUPT20HL1Q3ZLR7 823 aa23.08■■□□□ 1.29
AC004540.1-201ENST00000439120 MCOLN1Q9GZU1 580 aa23.08■■□□□ 1.29
AC004540.1-201ENST00000439120 SERPINA10Q9UK55 444 aa23.08■■□□□ 1.29
AC004540.1-201ENST00000439120 HDAC5Q9UQL6 1122 aa23.08■■□□□ 1.29
AC004540.1-201ENST00000439120 PTPN12Q05209 780 aaKnown RBP23.07■■□□□ 1.28
AC004540.1-201ENST00000439120 MKRN3Q13064 507 aaKnown RBP23.07■■□□□ 1.28
AC004540.1-201ENST00000439120 TNFAIP1Q13829 316 aa23.07■■□□□ 1.28
AC004540.1-201ENST00000439120 PUM3Q15397 648 aaKnown RBP23.07■■□□□ 1.28
AC004540.1-201ENST00000439120 FBXO33Q7Z6M2 555 aa23.07■■□□□ 1.28
AC004540.1-201ENST00000439120 VGLL2Q8N8G2 317 aa23.07■■□□□ 1.28
AC004540.1-201ENST00000439120 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.07■■□□□ 1.28
AC004540.1-201ENST00000439120 SREBF2Q12772 1141 aa23.06■■□□□ 1.28
AC004540.1-201ENST00000439120 TBC1D22AQ8WUA7 517 aa23.06■■□□□ 1.28
AC004540.1-201ENST00000439120 EYA2O00167 538 aa23.05■■□□□ 1.28
AC004540.1-201ENST00000439120 KIF16BQ96L93 1317 aa23.05■■□□□ 1.28
AC004540.1-201ENST00000439120 SLC5A1P13866 664 aa23.04■■□□□ 1.28
AC004540.1-201ENST00000439120 CRKP46108 304 aa23.04■■□□□ 1.28
AC004540.1-201ENST00000439120 RASA3Q14644 834 aa23.04■■□□□ 1.28
AC004540.1-201ENST00000439120 LDLRAD1Q5T700 205 aa23.04■■□□□ 1.28
AC004540.1-201ENST00000439120 SLC10A4Q96EP9 437 aa23.04■■□□□ 1.28
AC004540.1-201ENST00000439120 FZD1Q9UP38 647 aa23.04■■□□□ 1.28
AC004540.1-201ENST00000439120 BCAMP50895 628 aa23.03■■□□□ 1.28
AC004540.1-201ENST00000439120 DZIP1LQ8IYY4 767 aaKnown RBP23.03■■□□□ 1.28
AC004540.1-201ENST00000439120 TDRD3Q9H7E2 651 aaKnown RBP23.03■■□□□ 1.28
AC004540.1-201ENST00000439120 ZNF70Q9UC06 446 aaPredicted RBP23.03■■□□□ 1.28
AC004540.1-201ENST00000439120 AOX1Q06278 1338 aa23.03■■□□□ 1.28
AC004540.1-201ENST00000439120 IREB2P48200 963 aaKnown RBP23.02■■□□□ 1.28
AC004540.1-201ENST00000439120 RFX5P48382 616 aaPredicted RBP23.02■■□□□ 1.28
AC004540.1-201ENST00000439120 TNNI2P48788 182 aa23.02■■□□□ 1.28
AC004540.1-201ENST00000439120 RARSP54136 660 aaKnown RBP23.02■■□□□ 1.28
AC004540.1-201ENST00000439120 SPDYE2Q495Y8 402 aa23.02■■□□□ 1.28
AC004540.1-201ENST00000439120 NBPF12Q5TAG4 269 aaPredicted RBP23.02■■□□□ 1.28
AC004540.1-201ENST00000439120 LPIN2Q92539 896 aa23.02■■□□□ 1.28
AC004540.1-201ENST00000439120 SIL1Q9H173 461 aa23.02■■□□□ 1.28
AC004540.1-201ENST00000439120 SSC5DA1L4H1 1573 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms