RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 TRDNQ13061 729 aa12.2□□□□□ -0.46
CD44-210ENST00000434472 TTLL5Q6EMB2 1281 aa12.2□□□□□ -0.46
CD44-210ENST00000434472 CCAR1Q8IX12 1150 aaKnown RBP12.2□□□□□ -0.46
CD44-210ENST00000434472 CKAP2LQ8IYA6 745 aa12.2□□□□□ -0.46
CD44-210ENST00000434472 CBX8Q9HC52 389 aa12.2□□□□□ -0.46
CD44-210ENST00000434472 TRMT112Q9UI30 125 aaKnown RBP12.2□□□□□ -0.46
CD44-210ENST00000434472 ITGB4P16144 1822 aa12.2□□□□□ -0.46
CD44-210ENST00000434472 PLCH1Q4KWH8 1693 aa12.2□□□□□ -0.46
CD44-210ENST00000434472 GPTP24298 496 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 ARID4AP29374 1257 aaPredicted RBP12.19□□□□□ -0.46
CD44-210ENST00000434472 SCARF1Q14162 830 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 NOLC1Q14978 699 aaKnown RBP eCLIP12.19□□□□□ -0.46
CD44-210ENST00000434472 HLFQ16534 295 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 BRAPQ7Z569 592 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 CCDC85AQ96PX6 553 aaPredicted RBP12.19□□□□□ -0.46
CD44-210ENST00000434472 CDCA7Q9BWT1 371 aaPredicted RBP12.19□□□□□ -0.46
CD44-210ENST00000434472 GREM2Q9H772 168 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 SPTLC3Q9NUV7 552 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 RTEL1Q9NZ71 1219 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 MYH15Q9Y2K3 1946 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 A0A0G2JLW4 131 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 KLF18A0A0U1RQI7 1052 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 CPLX1O14810 134 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 FOXP2O15409 715 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 PDE8BO95263 885 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 STX1AQ16623 288 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 DZIP3Q86Y13 1208 aaKnown RBP12.19□□□□□ -0.46
CD44-210ENST00000434472 C8orf76Q96K31 380 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 PRIMPOLQ96LW4 560 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 USP28Q96RU2 1077 aa12.19□□□□□ -0.46
CD44-210ENST00000434472 PUS7LQ9H0K6 701 aaKnown RBP12.19□□□□□ -0.46
CD44-210ENST00000434472 NCOA5Q9HCD5 579 aaKnown RBP12.19□□□□□ -0.46
CD44-210ENST00000434472 A0A1W2PQ27 194 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 A0A1W2PQ64 194 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 A0A1W2PQD8 194 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 GOLGA8BA8MQT2 603 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 AP5Z1O43299 807 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 KINO60870 393 aaKnown RBP12.18□□□□□ -0.46
CD44-210ENST00000434472 CDKL5O76039 1030 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 YEATS4O95619 227 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 CDC25BP30305 580 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 MCAMP43121 646 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 ZNF165P49910 485 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 HAND2P61296 217 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 FAM160A1Q05DH4 1040 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 HSP90AA2PQ14568 343 aaPredicted RBP12.18□□□□□ -0.46
CD44-210ENST00000434472 PUM3Q15397 648 aaKnown RBP12.18□□□□□ -0.46
CD44-210ENST00000434472 ALX1Q15699 326 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 SLC9C2Q5TAH2 1124 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 CPLX2Q6PUV4 134 aaKnown RBP12.18□□□□□ -0.46
CD44-210ENST00000434472 CHST3Q7LGC8 479 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 ZNF34Q8IZ26 560 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 VGLL2Q8N8G2 317 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 LPIN2Q92539 896 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 MYH7P12883 1935 aa12.18□□□□□ -0.46
CD44-210ENST00000434472 NWD2Q9ULI1 1742 aa12.17□□□□□ -0.46
CD44-210ENST00000434472 ZMYM6O95789 1325 aa12.17□□□□□ -0.46
CD44-210ENST00000434472 DYNC1I1O14576 645 aa12.17□□□□□ -0.46
CD44-210ENST00000434472 SLC5A1P13866 664 aa12.17□□□□□ -0.46
CD44-210ENST00000434472 FDPSP14324 419 aaKnown RBP12.17□□□□□ -0.46
CD44-210ENST00000434472 DNTTIP2Q5QJE6 756 aaKnown RBP12.17□□□□□ -0.46
CD44-210ENST00000434472 LUZP1Q86V48 1076 aa12.17□□□□□ -0.46
CD44-210ENST00000434472 KCNG4Q8TDN1 519 aa12.17□□□□□ -0.46
CD44-210ENST00000434472 MAP7D2Q96T17 732 aa12.17□□□□□ -0.46
CD44-210ENST00000434472 TTC12Q9H892 705 aaPredicted RBP12.17□□□□□ -0.46
CD44-210ENST00000434472 ANO10Q9NW15 660 aa12.17□□□□□ -0.46
CD44-210ENST00000434472 ORC3Q9UBD5 711 aaPredicted RBP12.17□□□□□ -0.46
CD44-210ENST00000434472 ZBTB1Q9Y2K1 713 aa12.17□□□□□ -0.46
CD44-210ENST00000434472 UQCRHLA0A096LP55 91 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 GOLGA6L19H0YKK7 550 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 UQCRHP07919 91 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 ME1P48163 572 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 ZNF75DP51815 510 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 FOSBP53539 338 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 ANTXR2P58335 489 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 CEBPZQ03701 1054 aaKnown RBP12.16□□□□□ -0.46
CD44-210ENST00000434472 CCDC102BQ68D86 513 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 ADALQ6DHV7 355 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 PLA2G4DQ86XP0 818 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 FSIP1Q8NA03 581 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 ENGASEQ8NFI3 743 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 FBXO18Q8NFZ0 1043 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 MRPS27Q92552 414 aaKnown RBP12.16□□□□□ -0.46
CD44-210ENST00000434472 TMEM87BQ96K49 555 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 ZNF830Q96NB3 372 aaPredicted RBP12.16□□□□□ -0.46
CD44-210ENST00000434472 SLC4A9Q96Q91 983 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 PIH1D3Q9NQM4 214 aaKnown RBP12.16□□□□□ -0.46
CD44-210ENST00000434472 HPS5Q9UPZ3 1129 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 MYH3P11055 1940 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 LRP5O75197 1615 aa12.16□□□□□ -0.46
CD44-210ENST00000434472 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.16□□□□□ -0.46
CD44-210ENST00000434472 PDE6AP16499 860 aa12.15□□□□□ -0.46
CD44-210ENST00000434472 FGFR2P21802 821 aa12.15□□□□□ -0.46
CD44-210ENST00000434472 GUCY1B3Q02153 619 aa12.15□□□□□ -0.46
CD44-210ENST00000434472 STK38Q15208 465 aa12.15□□□□□ -0.46
CD44-210ENST00000434472 SF3A1Q15459 793 aaKnown RBP12.15□□□□□ -0.46
CD44-210ENST00000434472 PARP10Q53GL7 1025 aa12.15□□□□□ -0.46
CD44-210ENST00000434472 SARM1Q6SZW1 724 aa12.15□□□□□ -0.46
CD44-210ENST00000434472 SYNE4Q8N205 404 aa12.15□□□□□ -0.46
CD44-210ENST00000434472 KIAA1524Q8TCG1 905 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms