RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 CLRN2A0PK11 232 aa21.06■□□□□ 0.96
VARS-216ENST00000428445 SLC34A2O95436 690 aa21.06■□□□□ 0.96
VARS-216ENST00000428445 DLGAP5Q15398 846 aa21.06■□□□□ 0.96
VARS-216ENST00000428445 ARMC9Q7Z3E5 817 aa21.06■□□□□ 0.96
VARS-216ENST00000428445 WDR63Q8IWG1 891 aa21.06■□□□□ 0.96
VARS-216ENST00000428445 DEFB129Q9H1M3 183 aa21.06■□□□□ 0.96
VARS-216ENST00000428445 HPS5Q9UPZ3 1129 aa21.06■□□□□ 0.96
VARS-216ENST00000428445 GPR25O00155 361 aa21.05■□□□□ 0.96
VARS-216ENST00000428445 LDLRAD1Q5T700 205 aa21.05■□□□□ 0.96
VARS-216ENST00000428445 PRMT6Q96LA8 375 aaPredicted RBP21.05■□□□□ 0.96
VARS-216ENST00000428445 CFAP100Q494V2 611 aa21.04■□□□□ 0.96
VARS-216ENST00000428445 CLMNQ96JQ2 1002 aa21.04■□□□□ 0.96
VARS-216ENST00000428445 IL1R1P14778 569 aa21.03■□□□□ 0.96
VARS-216ENST00000428445 SPRYD7Q5W111 196 aa21.03■□□□□ 0.96
VARS-216ENST00000428445 C15orf52Q6ZUT6 534 aaKnown RBP21.03■□□□□ 0.96
VARS-216ENST00000428445 TAF7LQ5H9L4 462 aa21.02■□□□□ 0.96
VARS-216ENST00000428445 SLC4A10Q6U841 1118 aa21.02■□□□□ 0.96
VARS-216ENST00000428445 LDHAL6AQ6ZMR3 332 aa21.02■□□□□ 0.96
VARS-216ENST00000428445 PUS3Q9BZE2 481 aaKnown RBP21.02■□□□□ 0.96
VARS-216ENST00000428445 SSC5DA1L4H1 1573 aa21.02■□□□□ 0.95
VARS-216ENST00000428445 GRM8O00222 908 aa21.01■□□□□ 0.95
VARS-216ENST00000428445 MMP14P50281 582 aa21.01■□□□□ 0.95
VARS-216ENST00000428445 CCDC57Q2TAC2 916 aa21.01■□□□□ 0.95
VARS-216ENST00000428445 NBPF12Q5TAG4 269 aaPredicted RBP21.01■□□□□ 0.95
VARS-216ENST00000428445 ZNF804AQ7Z570 1209 aa21.01■□□□□ 0.95
VARS-216ENST00000428445 SLC10A4Q96EP9 437 aa21.01■□□□□ 0.95
VARS-216ENST00000428445 VEZTQ9HBM0 779 aa21.01■□□□□ 0.95
VARS-216ENST00000428445 CNNM1Q9NRU3 951 aa21.01■□□□□ 0.95
VARS-216ENST00000428445 SPDYE2BA6NHP3 402 aa21■□□□□ 0.95
VARS-216ENST00000428445 SPDYE6P0CI01 402 aa21■□□□□ 0.95
VARS-216ENST00000428445 RBM5P52756 815 aaKnown RBP eCLIP21■□□□□ 0.95
VARS-216ENST00000428445 SREBF2Q12772 1141 aa21■□□□□ 0.95
VARS-216ENST00000428445 MTMR14Q8NCE2 650 aa21■□□□□ 0.95
VARS-216ENST00000428445 ECM29Q5VYK3 1845 aa20.99■□□□□ 0.95
VARS-216ENST00000428445 PDE4DIPQ5VU43 2346 aa20.99■□□□□ 0.95
VARS-216ENST00000428445 ANP32CO43423 234 aa20.99■□□□□ 0.95
VARS-216ENST00000428445 GYG1P46976 350 aa20.99■□□□□ 0.95
VARS-216ENST00000428445 FAM9BQ8IZU0 186 aa20.99■□□□□ 0.95
VARS-216ENST00000428445 KAZALD1Q96I82 304 aa20.99■□□□□ 0.95
VARS-216ENST00000428445 SUCLG2Q96I99 432 aa20.99■□□□□ 0.95
VARS-216ENST00000428445 C9orf78Q9NZ63 289 aaPredicted RBP20.99■□□□□ 0.95
VARS-216ENST00000428445 FKTNO75072 461 aa20.98■□□□□ 0.95
VARS-216ENST00000428445 WNK4Q96J92 1243 aa20.98■□□□□ 0.95
VARS-216ENST00000428445 USP2O75604 605 aaPredicted RBP20.97■□□□□ 0.95
VARS-216ENST00000428445 GJA5P36382 358 aa20.97■□□□□ 0.95
VARS-216ENST00000428445 PKN2Q16513 984 aaKnown RBP20.97■□□□□ 0.95
VARS-216ENST00000428445 IFNL1Q8IU54 200 aa20.97■□□□□ 0.95
VARS-216ENST00000428445 CDAN1Q8IWY9 1227 aa20.97■□□□□ 0.95
VARS-216ENST00000428445 IGF2BP3O00425 579 aaKnown RBP eCLIP20.96■□□□□ 0.95
VARS-216ENST00000428445 MYO1BO43795 1136 aa20.96■□□□□ 0.95
VARS-216ENST00000428445 NBPF7P0C2Y1 421 aaPredicted RBP20.96■□□□□ 0.95
VARS-216ENST00000428445 FKBP1AP62942 108 aaKnown RBP20.96■□□□□ 0.95
VARS-216ENST00000428445 RASA3Q14644 834 aa20.96■□□□□ 0.95
VARS-216ENST00000428445 GRIK5Q16478 980 aa20.96■□□□□ 0.95
VARS-216ENST00000428445 MAP3K11Q16584 847 aa20.96■□□□□ 0.95
VARS-216ENST00000428445 IQSEC3Q9UPP2 1182 aaPredicted RBP20.96■□□□□ 0.95
VARS-216ENST00000428445 PPP1R12BO60237 982 aaPredicted RBP20.95■□□□□ 0.94
VARS-216ENST00000428445 ZEB1P37275 1124 aaPredicted RBP20.95■□□□□ 0.94
VARS-216ENST00000428445 TDRD7Q8NHU6 1098 aaKnown RBP20.95■□□□□ 0.94
VARS-216ENST00000428445 FAM84BQ96KN1 310 aaPredicted RBP20.95■□□□□ 0.94
VARS-216ENST00000428445 SRCIN1Q9C0H9 1055 aa20.95■□□□□ 0.94
VARS-216ENST00000428445 TDRD3Q9H7E2 651 aaKnown RBP20.95■□□□□ 0.94
VARS-216ENST00000428445 COL1A1P02452 1464 aaPredicted RBP20.94■□□□□ 0.94
VARS-216ENST00000428445 MANSC4A6NHS7 340 aaPredicted RBP20.94■□□□□ 0.94
VARS-216ENST00000428445 SUPT20HL1Q3ZLR7 823 aa20.94■□□□□ 0.94
VARS-216ENST00000428445 MFSD14BQ5SR56 506 aa20.94■□□□□ 0.94
VARS-216ENST00000428445 FBXO46Q6PJ61 603 aaPredicted RBP20.94■□□□□ 0.94
VARS-216ENST00000428445 CFHR5Q9BXR6 569 aa20.94■□□□□ 0.94
VARS-216ENST00000428445 ZNF70Q9UC06 446 aaPredicted RBP20.94■□□□□ 0.94
VARS-216ENST00000428445 TTF2Q9UNY4 1162 aaKnown RBP20.94■□□□□ 0.94
VARS-216ENST00000428445 ALDH1L1O75891 902 aa20.93■□□□□ 0.94
VARS-216ENST00000428445 HIBADHP31937 336 aaKnown RBP20.93■□□□□ 0.94
VARS-216ENST00000428445 NOM1Q5C9Z4 860 aaKnown RBP20.93■□□□□ 0.94
VARS-216ENST00000428445 RIPOR2Q9Y4F9 1068 aa20.93■□□□□ 0.94
VARS-216ENST00000428445 PPP2R3BQ9Y5P8 575 aa20.93■□□□□ 0.94
VARS-216ENST00000428445 FAM205AQ6ZU69 1335 aa20.93■□□□□ 0.94
VARS-216ENST00000428445 TCP10L2B9ZVM9 353 aa20.92■□□□□ 0.94
VARS-216ENST00000428445 UBE4AQ14139 1066 aa20.92■□□□□ 0.94
VARS-216ENST00000428445 LRRC24Q50LG9 513 aa20.92■□□□□ 0.94
VARS-216ENST00000428445 CNKSR2Q8WXI2 1034 aa20.92■□□□□ 0.94
VARS-216ENST00000428445 PTPN18Q99952 460 aa20.92■□□□□ 0.94
VARS-216ENST00000428445 ELP3Q9H9T3 547 aa20.92■□□□□ 0.94
VARS-216ENST00000428445 TRIM17Q9Y577 477 aa20.92■□□□□ 0.94
VARS-216ENST00000428445 CAP1Q01518 475 aa20.91■□□□□ 0.94
VARS-216ENST00000428445 KLHDC4Q8TBB5 520 aa20.91■□□□□ 0.94
VARS-216ENST00000428445 BICC1Q9H694 974 aaKnown RBP20.91■□□□□ 0.94
VARS-216ENST00000428445 ALDH1A1P00352 501 aa20.9■□□□□ 0.94
VARS-216ENST00000428445 ZBTB48P10074 688 aaPredicted RBP20.9■□□□□ 0.94
VARS-216ENST00000428445 IREB2P48200 963 aaKnown RBP20.9■□□□□ 0.94
VARS-216ENST00000428445 INHBEP58166 350 aa20.9■□□□□ 0.94
VARS-216ENST00000428445 CHAF1AQ13111 956 aaPredicted RBP20.9■□□□□ 0.94
VARS-216ENST00000428445 SPDYE2Q495Y8 402 aa20.9■□□□□ 0.94
VARS-216ENST00000428445 DZIP1LQ8IYY4 767 aaKnown RBP20.9■□□□□ 0.94
VARS-216ENST00000428445 OTOFQ9HC10 1997 aa20.9■□□□□ 0.94
VARS-216ENST00000428445 CENPFP49454 3210 aa20.89■□□□□ 0.93
VARS-216ENST00000428445 ZNF316A6NFI3 1004 aaPredicted RBP20.89■□□□□ 0.93
VARS-216ENST00000428445 CRKP46108 304 aa20.89■□□□□ 0.93
VARS-216ENST00000428445 CRHR2Q13324 411 aa20.89■□□□□ 0.93
VARS-216ENST00000428445 OTOP1Q7RTM1 612 aa20.89■□□□□ 0.93
VARS-216ENST00000428445 TEPSINQ96N21 525 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms