RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 FGFR2P21802 821 aa15.97■□□□□ 0.15
GPC1-204ENST00000426280 HIBADHP31937 336 aaKnown RBP15.97■□□□□ 0.15
GPC1-204ENST00000426280 BCAMP50895 628 aa15.97■□□□□ 0.15
GPC1-204ENST00000426280 SAPCD2Q86UD0 394 aa15.97■□□□□ 0.15
GPC1-204ENST00000426280 ZIC5Q96T25 663 aa15.97■□□□□ 0.15
GPC1-204ENST00000426280 SIL1Q9H173 461 aa15.97■□□□□ 0.15
GPC1-204ENST00000426280 WDR33Q9C0J8 1336 aaKnown RBP15.96■□□□□ 0.15
GPC1-204ENST00000426280 AOC2O75106 756 aa15.96■□□□□ 0.15
GPC1-204ENST00000426280 RLBP1P12271 317 aa15.96■□□□□ 0.15
GPC1-204ENST00000426280 ZNF804AQ7Z570 1209 aa15.96■□□□□ 0.15
GPC1-204ENST00000426280 TRPM7Q96QT4 1865 aa15.96■□□□□ 0.15
GPC1-204ENST00000426280 GRM1Q13255 1194 aa15.95■□□□□ 0.14
GPC1-204ENST00000426280 CDCA5Q96FF9 252 aa15.95■□□□□ 0.14
GPC1-204ENST00000426280 CAPNS2Q96L46 248 aa15.95■□□□□ 0.14
GPC1-204ENST00000426280 FAM205AQ6ZU69 1335 aa15.94■□□□□ 0.14
GPC1-204ENST00000426280 IPO8O15397 1037 aaKnown RBP15.94■□□□□ 0.14
GPC1-204ENST00000426280 COL13A1Q5TAT6 717 aaPredicted RBP15.94■□□□□ 0.14
GPC1-204ENST00000426280 ZKSCAN2Q63HK3 967 aa15.94■□□□□ 0.14
GPC1-204ENST00000426280 MOB2Q70IA6 237 aa15.94■□□□□ 0.14
GPC1-204ENST00000426280 MYO3BQ8WXR4 1341 aa15.94■□□□□ 0.14
GPC1-204ENST00000426280 FOXN1O15353 648 aa15.93■□□□□ 0.14
GPC1-204ENST00000426280 SULF1Q8IWU6 871 aa15.93■□□□□ 0.14
GPC1-204ENST00000426280 PRMT6Q96LA8 375 aaPredicted RBP15.93■□□□□ 0.14
GPC1-204ENST00000426280 PNMA6EA0A0J9YXQ4 647 aa15.92■□□□□ 0.14
GPC1-204ENST00000426280 PAXIP1Q6ZW49 1069 aaPredicted RBP15.92■□□□□ 0.14
GPC1-204ENST00000426280 OGFOD1Q8N543 542 aa15.92■□□□□ 0.14
GPC1-204ENST00000426280 GBA2Q9HCG7 927 aaPredicted RBP15.92■□□□□ 0.14
GPC1-204ENST00000426280 COPRSQ9NQ92 184 aa15.92■□□□□ 0.14
GPC1-204ENST00000426280 ADORA1P30542 326 aa15.91■□□□□ 0.14
GPC1-204ENST00000426280 FKBP1AP62942 108 aaKnown RBP15.91■□□□□ 0.14
GPC1-204ENST00000426280 CHAF1AQ13111 956 aaPredicted RBP15.91■□□□□ 0.14
GPC1-204ENST00000426280 CFAP100Q494V2 611 aa15.91■□□□□ 0.14
GPC1-204ENST00000426280 MFSD14BQ5SR56 506 aa15.91■□□□□ 0.14
GPC1-204ENST00000426280 C1orf115Q9H7X2 142 aa15.91■□□□□ 0.14
GPC1-204ENST00000426280 WBP1LQ9NX94 342 aa15.91■□□□□ 0.14
GPC1-204ENST00000426280 FZD1Q9UP38 647 aa15.91■□□□□ 0.14
GPC1-204ENST00000426280 CLRN2A0PK11 232 aa15.9■□□□□ 0.14
GPC1-204ENST00000426280 FAM155AB1AL88 458 aaPredicted RBP15.9■□□□□ 0.14
GPC1-204ENST00000426280 SRGAP3O43295 1099 aa15.9■□□□□ 0.14
GPC1-204ENST00000426280 CIAO1O76071 339 aa15.9■□□□□ 0.14
GPC1-204ENST00000426280 GNAI3P08754 354 aa15.9■□□□□ 0.14
GPC1-204ENST00000426280 HUNKP57058 714 aa15.9■□□□□ 0.14
GPC1-204ENST00000426280 MTX1Q13505 466 aa15.9■□□□□ 0.14
GPC1-204ENST00000426280 PUM3Q15397 648 aaKnown RBP15.9■□□□□ 0.14
GPC1-204ENST00000426280 PANK1Q8TE04 598 aa15.9■□□□□ 0.14
GPC1-204ENST00000426280 PITPNM2Q9BZ72 1349 aa15.9■□□□□ 0.14
GPC1-204ENST00000426280 PCNTO95613 3336 aa15.89■□□□□ 0.13
GPC1-204ENST00000426280 ZBTB7BO15156 539 aaPredicted RBP15.89■□□□□ 0.13
GPC1-204ENST00000426280 TIMM10P62072 90 aa15.89■□□□□ 0.13
GPC1-204ENST00000426280 DLGAP5Q15398 846 aa15.89■□□□□ 0.13
GPC1-204ENST00000426280 MTMR14Q8NCE2 650 aa15.89■□□□□ 0.13
GPC1-204ENST00000426280 LPIN2Q92539 896 aa15.89■□□□□ 0.13
GPC1-204ENST00000426280 HDAC9Q9UKV0 1011 aa15.89■□□□□ 0.13
GPC1-204ENST00000426280 TTF2Q9UNY4 1162 aaKnown RBP15.89■□□□□ 0.13
GPC1-204ENST00000426280 COL1A1P02452 1464 aaPredicted RBP15.89■□□□□ 0.13
GPC1-204ENST00000426280 SPDYE2BA6NHP3 402 aa15.88■□□□□ 0.13
GPC1-204ENST00000426280 UBE2Q2LH0YL09 131 aa15.88■□□□□ 0.13
GPC1-204ENST00000426280 GNAI2P04899 355 aa15.88■□□□□ 0.13
GPC1-204ENST00000426280 IFIT1P09914 478 aaKnown RBP15.88■□□□□ 0.13
GPC1-204ENST00000426280 SPDYE6P0CI01 402 aa15.88■□□□□ 0.13
GPC1-204ENST00000426280 TFCP2Q12800 502 aa15.88■□□□□ 0.13
GPC1-204ENST00000426280 DZIP1LQ8IYY4 767 aaKnown RBP15.88■□□□□ 0.13
GPC1-204ENST00000426280 C2orf69Q8N8R5 385 aa15.88■□□□□ 0.13
GPC1-204ENST00000426280 CEP126Q9P2H0 1117 aa15.88■□□□□ 0.13
GPC1-204ENST00000426280 IL15P40933 162 aaPredicted RBP15.87■□□□□ 0.13
GPC1-204ENST00000426280 PHKA1P46020 1223 aa15.87■□□□□ 0.13
GPC1-204ENST00000426280 ATP2B3Q16720 1220 aa15.87■□□□□ 0.13
GPC1-204ENST00000426280 CAVIN4Q5BKX8 364 aa15.87■□□□□ 0.13
GPC1-204ENST00000426280 VPS37DQ86XT2 251 aa15.87■□□□□ 0.13
GPC1-204ENST00000426280 HHIPL1Q96JK4 782 aa15.87■□□□□ 0.13
GPC1-204ENST00000426280 TDRD3Q9H7E2 651 aaKnown RBP15.87■□□□□ 0.13
GPC1-204ENST00000426280 FBXO3Q9UK99 471 aa15.87■□□□□ 0.13
GPC1-204ENST00000426280 SLC5A1P13866 664 aa15.86■□□□□ 0.13
GPC1-204ENST00000426280 ECE1P42892 770 aa15.86■□□□□ 0.13
GPC1-204ENST00000426280 RBM5P52756 815 aaKnown RBP eCLIP15.86■□□□□ 0.13
GPC1-204ENST00000426280 PRKG1Q13976 671 aa15.86■□□□□ 0.13
GPC1-204ENST00000426280 RGMBQ6NW40 437 aa15.86■□□□□ 0.13
GPC1-204ENST00000426280 CDAN1Q8IWY9 1227 aa15.86■□□□□ 0.13
GPC1-204ENST00000426280 TSKSQ9UJT2 592 aa15.86■□□□□ 0.13
GPC1-204ENST00000426280 CRKP46108 304 aa15.85■□□□□ 0.13
GPC1-204ENST00000426280 MMP14P50281 582 aa15.85■□□□□ 0.13
GPC1-204ENST00000426280 ATP8B2P98198 1209 aa15.85■□□□□ 0.13
GPC1-204ENST00000426280 POLA2Q14181 598 aa15.85■□□□□ 0.13
GPC1-204ENST00000426280 DEFB129Q9H1M3 183 aa15.85■□□□□ 0.13
GPC1-204ENST00000426280 ZNF70Q9UC06 446 aaPredicted RBP15.85■□□□□ 0.13
GPC1-204ENST00000426280 THSD7BQ9C0I4 1608 aa15.85■□□□□ 0.13
GPC1-204ENST00000426280 FRAT2O75474 233 aaPredicted RBP15.84■□□□□ 0.13
GPC1-204ENST00000426280 HSPA8P11142 646 aaKnown RBP15.84■□□□□ 0.13
GPC1-204ENST00000426280 LBX1P52954 281 aa15.84■□□□□ 0.13
GPC1-204ENST00000426280 ITPRIPQ8IWB1 547 aa15.84■□□□□ 0.13
GPC1-204ENST00000426280 HDAC5Q9UQL6 1122 aa15.84■□□□□ 0.13
GPC1-204ENST00000426280 SSC5DA1L4H1 1573 aa15.83■□□□□ 0.13
GPC1-204ENST00000426280 A0A1B0GUL7 405 aa15.83■□□□□ 0.12
GPC1-204ENST00000426280 MAP2K2P36507 400 aa15.83■□□□□ 0.12
GPC1-204ENST00000426280 ZNF157P51786 506 aaPredicted RBP15.83■□□□□ 0.12
GPC1-204ENST00000426280 CACNB3P54284 484 aa15.83■□□□□ 0.12
GPC1-204ENST00000426280 KIF23Q02241 960 aaPredicted RBP15.83■□□□□ 0.12
GPC1-204ENST00000426280 NBPF12Q5TAG4 269 aaPredicted RBP15.83■□□□□ 0.12
GPC1-204ENST00000426280 CCDC102BQ68D86 513 aa15.83■□□□□ 0.12
GPC1-204ENST00000426280 SSH3Q8TE77 659 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms