RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 HDAC9Q9UKV0 1011 aa32.82■■■□□ 2.84
CDK9-202ENST00000421939 ASTN2O75129 1339 aaPredicted RBP32.81■■■□□ 2.84
CDK9-202ENST00000421939 PNMA6EA0A0J9YXQ4 647 aa32.81■■■□□ 2.84
CDK9-202ENST00000421939 ZBTB7BO15156 539 aaPredicted RBP32.81■■■□□ 2.84
CDK9-202ENST00000421939 SCARF1Q14162 830 aa32.81■■■□□ 2.84
CDK9-202ENST00000421939 KRT26Q7Z3Y9 468 aa32.81■■■□□ 2.84
CDK9-202ENST00000421939 DCPSQ96C86 337 aaKnown RBP32.81■■■□□ 2.84
CDK9-202ENST00000421939 C1orf115Q9H7X2 142 aa32.8■■■□□ 2.84
CDK9-202ENST00000421939 ARAP2Q8WZ64 1704 aa32.8■■■□□ 2.84
CDK9-202ENST00000421939 ATP2B3Q16720 1220 aa32.79■■■□□ 2.84
CDK9-202ENST00000421939 USP48Q86UV5 1035 aa32.79■■■□□ 2.84
CDK9-202ENST00000421939 BCAMP50895 628 aa32.78■■■□□ 2.84
CDK9-202ENST00000421939 ANGEL2Q5VTE6 544 aaKnown RBP32.77■■■□□ 2.84
CDK9-202ENST00000421939 IQSEC3Q9UPP2 1182 aaPredicted RBP32.77■■■□□ 2.84
CDK9-202ENST00000421939 CNTNAP1P78357 1384 aa32.76■■■□□ 2.83
CDK9-202ENST00000421939 ADM5C9JUS6 153 aa32.76■■■□□ 2.83
CDK9-202ENST00000421939 FRAT2O75474 233 aaPredicted RBP32.76■■■□□ 2.83
CDK9-202ENST00000421939 MFSD14BQ5SR56 506 aa32.76■■■□□ 2.83
CDK9-202ENST00000421939 CST9Q5W186 159 aa32.76■■■□□ 2.83
CDK9-202ENST00000421939 SULF1Q8IWU6 871 aa32.76■■■□□ 2.83
CDK9-202ENST00000421939 MKRN1Q9UHC7 482 aaKnown RBP32.76■■■□□ 2.83
CDK9-202ENST00000421939 POLR2AP24928 1970 aaKnown RBP32.76■■■□□ 2.83
CDK9-202ENST00000421939 WNT10BO00744 389 aa32.75■■■□□ 2.83
CDK9-202ENST00000421939 CELF2O95319 508 aaKnown RBP32.75■■■□□ 2.83
CDK9-202ENST00000421939 NBPF9Q3BBW0 867 aa32.75■■■□□ 2.83
CDK9-202ENST00000421939 ABT1Q9ULW3 272 aaKnown RBP32.75■■■□□ 2.83
CDK9-202ENST00000421939 PITPNM2Q9BZ72 1349 aa32.75■■■□□ 2.83
CDK9-202ENST00000421939 F8W031 263 aaPredicted RBP32.74■■■□□ 2.83
CDK9-202ENST00000421939 CHAF1AQ13111 956 aaPredicted RBP32.74■■■□□ 2.83
CDK9-202ENST00000421939 YTHDC1Q96MU7 727 aaKnown RBP32.74■■■□□ 2.83
CDK9-202ENST00000421939 POLA2Q14181 598 aa32.73■■■□□ 2.83
CDK9-202ENST00000421939 MVPQ14764 893 aaKnown RBP32.73■■■□□ 2.83
CDK9-202ENST00000421939 ZNF408Q9H9D4 720 aa32.73■■■□□ 2.83
CDK9-202ENST00000421939 ATP8B2P98198 1209 aa32.72■■■□□ 2.83
CDK9-202ENST00000421939 DLK2Q6UY11 383 aa32.72■■■□□ 2.83
CDK9-202ENST00000421939 JMYQ8N9B5 988 aa32.72■■■□□ 2.83
CDK9-202ENST00000421939 SSH3Q8TE77 659 aa32.72■■■□□ 2.83
CDK9-202ENST00000421939 ZBED3Q96IU2 234 aaPredicted RBP32.72■■■□□ 2.83
CDK9-202ENST00000421939 RASSF10A6NK89 507 aa32.71■■■□□ 2.83
CDK9-202ENST00000421939 TFCP2Q12800 502 aa32.71■■■□□ 2.83
CDK9-202ENST00000421939 TBC1D22AQ8WUA7 517 aa32.71■■■□□ 2.83
CDK9-202ENST00000421939 G3BP1Q13283 466 aaKnown RBP eCLIP32.7■■■□□ 2.83
CDK9-202ENST00000421939 DLGAP5Q15398 846 aa32.7■■■□□ 2.83
CDK9-202ENST00000421939 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.7■■■□□ 2.83
CDK9-202ENST00000421939 COG6Q9Y2V7 657 aa32.7■■■□□ 2.83
CDK9-202ENST00000421939 MYH13Q9UKX3 1938 aa32.7■■■□□ 2.83
CDK9-202ENST00000421939 PCNTO95613 3336 aa32.7■■■□□ 2.82
CDK9-202ENST00000421939 MTMR14Q8NCE2 650 aa32.69■■■□□ 2.82
CDK9-202ENST00000421939 DDX19BQ9UMR2 479 aa32.69■■■□□ 2.82
CDK9-202ENST00000421939 AKAP2Q9Y2D5 859 aa32.69■■■□□ 2.82
CDK9-202ENST00000421939 COL1A1P02452 1464 aaPredicted RBP32.68■■■□□ 2.82
CDK9-202ENST00000421939 TTF2Q9UNY4 1162 aaKnown RBP32.68■■■□□ 2.82
CDK9-202ENST00000421939 TLL2Q9Y6L7 1015 aa32.68■■■□□ 2.82
CDK9-202ENST00000421939 ADORA1P30542 326 aa32.67■■■□□ 2.82
CDK9-202ENST00000421939 CFAP100Q494V2 611 aa32.67■■■□□ 2.82
CDK9-202ENST00000421939 CEP85Q6P2H3 762 aa32.67■■■□□ 2.82
CDK9-202ENST00000421939 GNL3LQ9NVN8 582 aaKnown RBP32.67■■■□□ 2.82
CDK9-202ENST00000421939 A0A1B0GUL7 405 aa32.66■■■□□ 2.82
CDK9-202ENST00000421939 DEFB115Q30KQ5 88 aa32.66■■■□□ 2.82
CDK9-202ENST00000421939 CDCA5Q96FF9 252 aa32.66■■■□□ 2.82
CDK9-202ENST00000421939 SPDYE2BA6NHP3 402 aa32.65■■■□□ 2.82
CDK9-202ENST00000421939 SPDYE6P0CI01 402 aa32.65■■■□□ 2.82
CDK9-202ENST00000421939 PHKA1P46020 1223 aa32.65■■■□□ 2.82
CDK9-202ENST00000421939 TIMM10P62072 90 aa32.65■■■□□ 2.82
CDK9-202ENST00000421939 PDE3AQ14432 1141 aa32.65■■■□□ 2.82
CDK9-202ENST00000421939 SCAF8Q9UPN6 1271 aaKnown RBP32.65■■■□□ 2.82
CDK9-202ENST00000421939 PCDHAC2Q9Y5I4 1007 aa32.65■■■□□ 2.82
CDK9-202ENST00000421939 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.65■■■□□ 2.82
CDK9-202ENST00000421939 ECM29Q5VYK3 1845 aa32.65■■■□□ 2.82
CDK9-202ENST00000421939 GRIK5Q16478 980 aa32.64■■■□□ 2.82
CDK9-202ENST00000421939 APOBEC3FQ8IUX4 373 aaKnown RBP32.64■■■□□ 2.82
CDK9-202ENST00000421939 SERPINA10Q9UK55 444 aa32.64■■■□□ 2.82
CDK9-202ENST00000421939 SURF6O75683 361 aaKnown RBP32.63■■■□□ 2.81
CDK9-202ENST00000421939 VEGFBP49765 207 aa32.63■■■□□ 2.81
CDK9-202ENST00000421939 RBM5P52756 815 aaKnown RBP eCLIP32.63■■■□□ 2.81
CDK9-202ENST00000421939 OS9Q13438 667 aaPredicted RBP32.63■■■□□ 2.81
CDK9-202ENST00000421939 C20orf194Q5TEA3 1177 aa32.63■■■□□ 2.81
CDK9-202ENST00000421939 SAPCD2Q86UD0 394 aa32.63■■■□□ 2.81
CDK9-202ENST00000421939 WDR66Q8TBY9 1149 aa32.63■■■□□ 2.81
CDK9-202ENST00000421939 SEMA3EO15041 775 aa32.62■■■□□ 2.81
CDK9-202ENST00000421939 CCDC102BQ68D86 513 aa32.62■■■□□ 2.81
CDK9-202ENST00000421939 XAGE2Q96GT9 111 aa32.62■■■□□ 2.81
CDK9-202ENST00000421939 GBA2Q9HCG7 927 aaPredicted RBP32.62■■■□□ 2.81
CDK9-202ENST00000421939 ZBTB40Q9NUA8 1239 aa32.62■■■□□ 2.81
CDK9-202ENST00000421939 SUGT1Q9Y2Z0 365 aa32.62■■■□□ 2.81
CDK9-202ENST00000421939 MYO1BO43795 1136 aa32.61■■■□□ 2.81
CDK9-202ENST00000421939 CHMP4BQ9H444 224 aaKnown RBP32.61■■■□□ 2.81
CDK9-202ENST00000421939 NOP58Q9Y2X3 529 aaKnown RBP32.61■■■□□ 2.81
CDK9-202ENST00000421939 ZBTB22O15209 634 aa32.6■■■□□ 2.81
CDK9-202ENST00000421939 PAXIP1Q6ZW49 1069 aaPredicted RBP32.6■■■□□ 2.81
CDK9-202ENST00000421939 PRMT6Q96LA8 375 aaPredicted RBP32.6■■■□□ 2.81
CDK9-202ENST00000421939 NEUROD6Q96NK8 337 aa32.6■■■□□ 2.81
CDK9-202ENST00000421939 DENND2AQ9ULE3 1009 aa32.6■■■□□ 2.81
CDK9-202ENST00000421939 CRKP46108 304 aa32.59■■■□□ 2.81
CDK9-202ENST00000421939 C2orf69Q8N8R5 385 aa32.59■■■□□ 2.81
CDK9-202ENST00000421939 MAST3O60307 1309 aa32.58■■■□□ 2.81
CDK9-202ENST00000421939 AOX1Q06278 1338 aa32.58■■■□□ 2.81
CDK9-202ENST00000421939 CLRN2A0PK11 232 aa32.58■■■□□ 2.81
CDK9-202ENST00000421939 HDLBPQ00341 1268 aaKnown RBP32.58■■■□□ 2.81
CDK9-202ENST00000421939 HHIPL1Q96JK4 782 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms