RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 MYO1BO43795 1136 aa26.79■■□□□ 1.88
PTPN4-202ENST00000420482 CDCA7LQ96GN5 454 aa26.79■■□□□ 1.88
PTPN4-202ENST00000420482 KAZALD1Q96I82 304 aa26.79■■□□□ 1.88
PTPN4-202ENST00000420482 FAM155AB1AL88 458 aaPredicted RBP26.78■■□□□ 1.88
PTPN4-202ENST00000420482 SLC10A3P09131 477 aa26.78■■□□□ 1.88
PTPN4-202ENST00000420482 TTLL12Q14166 644 aaPredicted RBP26.78■■□□□ 1.88
PTPN4-202ENST00000420482 HIBADHP31937 336 aaKnown RBP26.77■■□□□ 1.88
PTPN4-202ENST00000420482 VPS37DQ86XT2 251 aa26.77■■□□□ 1.88
PTPN4-202ENST00000420482 TRMT2AQ8IZ69 625 aaKnown RBP26.77■■□□□ 1.88
PTPN4-202ENST00000420482 KIF23Q02241 960 aaPredicted RBP26.76■■□□□ 1.87
PTPN4-202ENST00000420482 MTMR14Q8NCE2 650 aa26.76■■□□□ 1.87
PTPN4-202ENST00000420482 MCOLN1Q9GZU1 580 aa26.76■■□□□ 1.87
PTPN4-202ENST00000420482 HDAC5Q9UQL6 1122 aa26.76■■□□□ 1.87
PTPN4-202ENST00000420482 RIPOR2Q9Y4F9 1068 aa26.76■■□□□ 1.87
PTPN4-202ENST00000420482 CCDC85CA6NKD9 419 aa26.75■■□□□ 1.87
PTPN4-202ENST00000420482 METTL24Q5JXM2 366 aa26.75■■□□□ 1.87
PTPN4-202ENST00000420482 ZBED3Q96IU2 234 aaPredicted RBP26.75■■□□□ 1.87
PTPN4-202ENST00000420482 PUS3Q9BZE2 481 aaKnown RBP26.75■■□□□ 1.87
PTPN4-202ENST00000420482 USP44Q9H0E7 712 aa26.75■■□□□ 1.87
PTPN4-202ENST00000420482 SAGE1Q9NXZ1 904 aa26.75■■□□□ 1.87
PTPN4-202ENST00000420482 COL1A1P02452 1464 aaPredicted RBP26.74■■□□□ 1.87
PTPN4-202ENST00000420482 F8W031 263 aaPredicted RBP26.74■■□□□ 1.87
PTPN4-202ENST00000420482 CAVIN4Q5BKX8 364 aa26.74■■□□□ 1.87
PTPN4-202ENST00000420482 CERS5Q8N5B7 392 aa26.74■■□□□ 1.87
PTPN4-202ENST00000420482 ANKRD44Q8N8A2 993 aa26.74■■□□□ 1.87
PTPN4-202ENST00000420482 SCAF8Q9UPN6 1271 aaKnown RBP26.74■■□□□ 1.87
PTPN4-202ENST00000420482 FAM205AQ6ZU69 1335 aa26.73■■□□□ 1.87
PTPN4-202ENST00000420482 ARMC9Q7Z3E5 817 aa26.73■■□□□ 1.87
PTPN4-202ENST00000420482 TDRD7Q8NHU6 1098 aaKnown RBP26.73■■□□□ 1.87
PTPN4-202ENST00000420482 API5Q9BZZ5 524 aaKnown RBP26.73■■□□□ 1.87
PTPN4-202ENST00000420482 GYG1P46976 350 aa26.72■■□□□ 1.87
PTPN4-202ENST00000420482 RGS19P49795 217 aa26.72■■□□□ 1.87
PTPN4-202ENST00000420482 RBM5P52756 815 aaKnown RBP eCLIP26.72■■□□□ 1.87
PTPN4-202ENST00000420482 PRAMEF18Q5VWM3 479 aa26.72■■□□□ 1.87
PTPN4-202ENST00000420482 PPP2R3BQ9Y5P8 575 aa26.72■■□□□ 1.87
PTPN4-202ENST00000420482 FRAT2O75474 233 aaPredicted RBP26.71■■□□□ 1.87
PTPN4-202ENST00000420482 CFAP100Q494V2 611 aa26.71■■□□□ 1.87
PTPN4-202ENST00000420482 MFSD14BQ5SR56 506 aa26.71■■□□□ 1.87
PTPN4-202ENST00000420482 RASAL3Q86YV0 1011 aa26.71■■□□□ 1.87
PTPN4-202ENST00000420482 FAM84BQ96KN1 310 aaPredicted RBP26.71■■□□□ 1.87
PTPN4-202ENST00000420482 UBE2Q2LH0YL09 131 aa26.7■■□□□ 1.86
PTPN4-202ENST00000420482 PDE8BO95263 885 aa26.7■■□□□ 1.86
PTPN4-202ENST00000420482 DGKZQ13574 1117 aa26.7■■□□□ 1.86
PTPN4-202ENST00000420482 DEFB129Q9H1M3 183 aa26.7■■□□□ 1.86
PTPN4-202ENST00000420482 JAG2Q9Y219 1238 aa26.7■■□□□ 1.86
PTPN4-202ENST00000420482 SPDYE2BA6NHP3 402 aa26.69■■□□□ 1.86
PTPN4-202ENST00000420482 UBTFL1P0CB47 393 aaPredicted RBP26.69■■□□□ 1.86
PTPN4-202ENST00000420482 SPDYE6P0CI01 402 aa26.69■■□□□ 1.86
PTPN4-202ENST00000420482 LRRC24Q50LG9 513 aa26.69■■□□□ 1.86
PTPN4-202ENST00000420482 NOB1Q9ULX3 412 aaKnown RBP26.69■■□□□ 1.86
PTPN4-202ENST00000420482 CSRNP1Q96S65 589 aa26.68■■□□□ 1.86
PTPN4-202ENST00000420482 SERPINA10Q9UK55 444 aa26.68■■□□□ 1.86
PTPN4-202ENST00000420482 KIF16BQ96L93 1317 aa26.67■■□□□ 1.86
PTPN4-202ENST00000420482 ECM29Q5VYK3 1845 aa26.67■■□□□ 1.86
PTPN4-202ENST00000420482 IFIT1P09914 478 aaKnown RBP26.67■■□□□ 1.86
PTPN4-202ENST00000420482 MLLT1Q03111 559 aaPredicted RBP26.67■■□□□ 1.86
PTPN4-202ENST00000420482 TNFAIP1Q13829 316 aa26.67■■□□□ 1.86
PTPN4-202ENST00000420482 SUPT20HL1Q3ZLR7 823 aa26.67■■□□□ 1.86
PTPN4-202ENST00000420482 MOB2Q70IA6 237 aa26.67■■□□□ 1.86
PTPN4-202ENST00000420482 TBC1D22AQ8WUA7 517 aa26.67■■□□□ 1.86
PTPN4-202ENST00000420482 VEZTQ9HBM0 779 aa26.67■■□□□ 1.86
PTPN4-202ENST00000420482 RNF186Q9NXI6 227 aa26.67■■□□□ 1.86
PTPN4-202ENST00000420482 TTF2Q9UNY4 1162 aaKnown RBP26.67■■□□□ 1.86
PTPN4-202ENST00000420482 PPP1R12BO60237 982 aaPredicted RBP26.66■■□□□ 1.86
PTPN4-202ENST00000420482 TRPA1O75762 1119 aa26.66■■□□□ 1.86
PTPN4-202ENST00000420482 PUM3Q15397 648 aaKnown RBP26.66■■□□□ 1.86
PTPN4-202ENST00000420482 FBXO33Q7Z6M2 555 aa26.66■■□□□ 1.86
PTPN4-202ENST00000420482 PRMT6Q96LA8 375 aaPredicted RBP26.65■■□□□ 1.86
PTPN4-202ENST00000420482 FBXO3Q9UK99 471 aa26.65■■□□□ 1.86
PTPN4-202ENST00000420482 CLRN2A0PK11 232 aa26.64■■□□□ 1.86
PTPN4-202ENST00000420482 EYA2O00167 538 aa26.64■■□□□ 1.86
PTPN4-202ENST00000420482 PRKG1Q13976 671 aa26.64■■□□□ 1.86
PTPN4-202ENST00000420482 VGLL2Q8N8G2 317 aa26.64■■□□□ 1.86
PTPN4-202ENST00000420482 KLHDC4Q8TBB5 520 aa26.64■■□□□ 1.86
PTPN4-202ENST00000420482 ANGEL1Q9UNK9 670 aaKnown RBP26.64■■□□□ 1.86
PTPN4-202ENST00000420482 ARHGAP45Q92619 1136 aa26.63■■□□□ 1.85
PTPN4-202ENST00000420482 ARAP2Q8WZ64 1704 aa26.62■■□□□ 1.85
PTPN4-202ENST00000420482 SLC5A1P13866 664 aa26.62■■□□□ 1.85
PTPN4-202ENST00000420482 RARSP54136 660 aaKnown RBP26.62■■□□□ 1.85
PTPN4-202ENST00000420482 SREBF2Q12772 1141 aa26.62■■□□□ 1.85
PTPN4-202ENST00000420482 CHAF1AQ13111 956 aaPredicted RBP26.62■■□□□ 1.85
PTPN4-202ENST00000420482 UNCXA6NJT0 531 aa26.61■■□□□ 1.85
PTPN4-202ENST00000420482 PTPN12Q05209 780 aaKnown RBP26.61■■□□□ 1.85
PTPN4-202ENST00000420482 LPIN2Q92539 896 aa26.61■■□□□ 1.85
PTPN4-202ENST00000420482 IQSEC3Q9UPP2 1182 aaPredicted RBP26.61■■□□□ 1.85
PTPN4-202ENST00000420482 PCDHAC2Q9Y5I4 1007 aa26.61■■□□□ 1.85
PTPN4-202ENST00000420482 IPO8O15397 1037 aaKnown RBP26.6■■□□□ 1.85
PTPN4-202ENST00000420482 TNNI2P48788 182 aa26.6■■□□□ 1.85
PTPN4-202ENST00000420482 HDLBPQ00341 1268 aaKnown RBP26.6■■□□□ 1.85
PTPN4-202ENST00000420482 LDLRAD1Q5T700 205 aa26.6■■□□□ 1.85
PTPN4-202ENST00000420482 MAST3O60307 1309 aa26.6■■□□□ 1.85
PTPN4-202ENST00000420482 CRKP46108 304 aa26.59■■□□□ 1.85
PTPN4-202ENST00000420482 IREB2P48200 963 aaKnown RBP26.59■■□□□ 1.85
PTPN4-202ENST00000420482 RFX5P48382 616 aaPredicted RBP26.59■■□□□ 1.85
PTPN4-202ENST00000420482 MAP3K11Q16584 847 aa26.59■■□□□ 1.85
PTPN4-202ENST00000420482 SPDYE2Q495Y8 402 aa26.59■■□□□ 1.85
PTPN4-202ENST00000420482 DZIP1LQ8IYY4 767 aaKnown RBP26.59■■□□□ 1.85
PTPN4-202ENST00000420482 SLC10A4Q96EP9 437 aa26.59■■□□□ 1.85
PTPN4-202ENST00000420482 SUGT1Q9Y2Z0 365 aa26.59■■□□□ 1.85
PTPN4-202ENST00000420482 CIAO1O76071 339 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms