RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 CHRDQ9H2X0 955 aa6.55□□□□□ -1.36
SDCBPP3-201ENST00000419629 ADGRE2Q9UHX3 823 aa6.55□□□□□ -1.36
SDCBPP3-201ENST00000419629 MAP4P27816 1152 aaKnown RBP6.54□□□□□ -1.36
SDCBPP3-201ENST00000419629 C19orf57Q0VDD7 668 aa6.54□□□□□ -1.36
SDCBPP3-201ENST00000419629 TMEM102Q8N9M5 508 aaPredicted RBP6.54□□□□□ -1.36
SDCBPP3-201ENST00000419629 NXPE3Q969Y0 559 aa6.54□□□□□ -1.36
SDCBPP3-201ENST00000419629 MFSD14AQ96MC6 490 aa6.54□□□□□ -1.36
SDCBPP3-201ENST00000419629 A6NHS1 94 aa6.53□□□□□ -1.36
SDCBPP3-201ENST00000419629 SOX1O00570 391 aaPredicted RBP6.53□□□□□ -1.36
SDCBPP3-201ENST00000419629 PDGFAP04085 211 aa6.53□□□□□ -1.36
SDCBPP3-201ENST00000419629 DNM1Q05193 864 aaKnown RBP6.53□□□□□ -1.36
SDCBPP3-201ENST00000419629 SGO2Q562F6 1265 aa6.53□□□□□ -1.36
SDCBPP3-201ENST00000419629 VN1R5Q7Z5H4 357 aa6.53□□□□□ -1.36
SDCBPP3-201ENST00000419629 HELQQ8TDG4 1101 aa6.53□□□□□ -1.36
SDCBPP3-201ENST00000419629 TMPRSS13Q9BYE2 586 aa6.53□□□□□ -1.36
SDCBPP3-201ENST00000419629 PIM2Q9P1W9 311 aa6.53□□□□□ -1.36
SDCBPP3-201ENST00000419629 ARID1BQ8NFD5 2236 aaPredicted RBP6.52□□□□□ -1.37
SDCBPP3-201ENST00000419629 GAS2O43903 313 aaKnown RBP6.52□□□□□ -1.37
SDCBPP3-201ENST00000419629 TIAF1O95411 115 aa6.52□□□□□ -1.37
SDCBPP3-201ENST00000419629 ARL4DP49703 201 aa6.52□□□□□ -1.37
SDCBPP3-201ENST00000419629 SMG8Q8ND04 991 aaKnown RBP6.52□□□□□ -1.37
SDCBPP3-201ENST00000419629 BSNDQ8WZ55 320 aa6.52□□□□□ -1.37
SDCBPP3-201ENST00000419629 PMEPA1Q969W9 287 aa6.52□□□□□ -1.37
SDCBPP3-201ENST00000419629 SUGCTQ9HAC7 445 aa6.52□□□□□ -1.37
SDCBPP3-201ENST00000419629 DLGAP3O95886 979 aa6.51□□□□□ -1.37
SDCBPP3-201ENST00000419629 F13BP05160 661 aa6.51□□□□□ -1.37
SDCBPP3-201ENST00000419629 PCSK2P16519 638 aa6.51□□□□□ -1.37
SDCBPP3-201ENST00000419629 MZF1P28698 734 aaPredicted RBP6.51□□□□□ -1.37
SDCBPP3-201ENST00000419629 IKBKEQ14164 716 aa6.51□□□□□ -1.37
SDCBPP3-201ENST00000419629 C8orf34Q49A92 452 aa6.51□□□□□ -1.37
SDCBPP3-201ENST00000419629 NOM1Q5C9Z4 860 aaKnown RBP6.51□□□□□ -1.37
SDCBPP3-201ENST00000419629 NUTM2GQ5VZR2 741 aa6.51□□□□□ -1.37
SDCBPP3-201ENST00000419629 SHISA5Q8N114 240 aa6.51□□□□□ -1.37
SDCBPP3-201ENST00000419629 C12orf50Q8NA57 414 aaPredicted RBP6.51□□□□□ -1.37
SDCBPP3-201ENST00000419629 OSMRQ99650 979 aa6.51□□□□□ -1.37
SDCBPP3-201ENST00000419629 ZKSCAN3Q9BRR0 538 aa6.51□□□□□ -1.37
SDCBPP3-201ENST00000419629 LOC100289279A0A1B0GTE1 492 aa6.5□□□□□ -1.37
SDCBPP3-201ENST00000419629 MSMPQ1L6U9 139 aa6.5□□□□□ -1.37
SDCBPP3-201ENST00000419629 ABI1Q8IZP0 508 aa6.5□□□□□ -1.37
SDCBPP3-201ENST00000419629 FBXL6Q8N531 539 aa6.5□□□□□ -1.37
SDCBPP3-201ENST00000419629 PBXIP1Q96AQ6 731 aa6.5□□□□□ -1.37
SDCBPP3-201ENST00000419629 ATG3Q9NT62 314 aa6.5□□□□□ -1.37
SDCBPP3-201ENST00000419629 LEMD3Q9Y2U8 911 aa6.5□□□□□ -1.37
SDCBPP3-201ENST00000419629 EREGO14944 169 aa6.49□□□□□ -1.37
SDCBPP3-201ENST00000419629 DRD2P14416 443 aa6.49□□□□□ -1.37
SDCBPP3-201ENST00000419629 FOSL1P15407 271 aa6.49□□□□□ -1.37
SDCBPP3-201ENST00000419629 EIF1AXP47813 144 aaKnown RBP6.49□□□□□ -1.37
SDCBPP3-201ENST00000419629 GIMAP7Q8NHV1 300 aa6.49□□□□□ -1.37
SDCBPP3-201ENST00000419629 SOX17Q9H6I2 414 aaPredicted RBP6.49□□□□□ -1.37
SDCBPP3-201ENST00000419629 MPSTP25325 297 aa6.48□□□□□ -1.37
SDCBPP3-201ENST00000419629 RXRBP28702 533 aa6.48□□□□□ -1.37
SDCBPP3-201ENST00000419629 CPSF6Q16630 551 aaKnown RBP eCLIP6.48□□□□□ -1.37
SDCBPP3-201ENST00000419629 NFXL1Q6ZNB6 911 aa6.48□□□□□ -1.37
SDCBPP3-201ENST00000419629 TTC16Q8NEE8 873 aa6.48□□□□□ -1.37
SDCBPP3-201ENST00000419629 CCDC97Q96F63 343 aaPredicted RBP6.48□□□□□ -1.37
SDCBPP3-201ENST00000419629 USP26Q9BXU7 913 aa6.48□□□□□ -1.37
SDCBPP3-201ENST00000419629 BHLHE41Q9C0J9 482 aaPredicted RBP6.48□□□□□ -1.37
SDCBPP3-201ENST00000419629 CYP4F12Q9HCS2 524 aa6.48□□□□□ -1.37
SDCBPP3-201ENST00000419629 FAM95CA0A1B0GW59 222 aa6.47□□□□□ -1.37
SDCBPP3-201ENST00000419629 TNFRSF21O75509 655 aa6.47□□□□□ -1.37
SDCBPP3-201ENST00000419629 PRNPP04156 253 aa6.47□□□□□ -1.37
SDCBPP3-201ENST00000419629 ESRRAP11474 423 aaPredicted RBP6.47□□□□□ -1.37
SDCBPP3-201ENST00000419629 EXOSC6Q5RKV6 272 aaKnown RBP6.47□□□□□ -1.37
SDCBPP3-201ENST00000419629 CDPF1Q6NVV7 123 aa6.47□□□□□ -1.37
SDCBPP3-201ENST00000419629 C2CD4AQ8NCU7 369 aaPredicted RBP6.47□□□□□ -1.37
SDCBPP3-201ENST00000419629 GTF3C2Q8WUA4 911 aaPredicted RBP6.47□□□□□ -1.37
SDCBPP3-201ENST00000419629 FBLIM1Q8WUP2 373 aa6.47□□□□□ -1.37
SDCBPP3-201ENST00000419629 OSBPL1AQ9BXW6 950 aa6.47□□□□□ -1.37
SDCBPP3-201ENST00000419629 CCDC39Q9UFE4 941 aa6.47□□□□□ -1.37
SDCBPP3-201ENST00000419629 POLIQ9UNA4 740 aa6.47□□□□□ -1.37
SDCBPP3-201ENST00000419629 PHACTR2O75167 634 aa6.46□□□□□ -1.38
SDCBPP3-201ENST00000419629 EDN3P14138 238 aa6.46□□□□□ -1.38
SDCBPP3-201ENST00000419629 ADMP35318 185 aa6.46□□□□□ -1.38
SDCBPP3-201ENST00000419629 USP11P51784 963 aa6.46□□□□□ -1.38
SDCBPP3-201ENST00000419629 NFKBIBQ15653 356 aa6.46□□□□□ -1.38
SDCBPP3-201ENST00000419629 PEAR1Q5VY43 1037 aaPredicted RBP6.46□□□□□ -1.38
SDCBPP3-201ENST00000419629 PAOXQ6QHF9 649 aa6.46□□□□□ -1.38
SDCBPP3-201ENST00000419629 CBLL1Q75N03 491 aa6.46□□□□□ -1.38
SDCBPP3-201ENST00000419629 SERPINA10Q9UK55 444 aa6.46□□□□□ -1.38
SDCBPP3-201ENST00000419629 ANGEL1Q9UNK9 670 aaKnown RBP6.46□□□□□ -1.38
SDCBPP3-201ENST00000419629 NPR3P17342 541 aa6.45□□□□□ -1.38
SDCBPP3-201ENST00000419629 SOX4Q06945 474 aaPredicted RBP6.45□□□□□ -1.38
SDCBPP3-201ENST00000419629 FZD5Q13467 585 aa6.45□□□□□ -1.38
SDCBPP3-201ENST00000419629 MTMR3Q13615 1198 aa6.45□□□□□ -1.38
SDCBPP3-201ENST00000419629 COL19A1Q14993 1142 aa6.45□□□□□ -1.38
SDCBPP3-201ENST00000419629 ALKBH2Q6NS38 261 aa6.45□□□□□ -1.38
SDCBPP3-201ENST00000419629 ASAP3Q8TDY4 903 aa6.45□□□□□ -1.38
SDCBPP3-201ENST00000419629 EZH1Q92800 747 aaPredicted RBP6.45□□□□□ -1.38
SDCBPP3-201ENST00000419629 NRSN2Q9GZP1 204 aa6.45□□□□□ -1.38
SDCBPP3-201ENST00000419629 LATS2Q9NRM7 1088 aa6.45□□□□□ -1.38
SDCBPP3-201ENST00000419629 FOXD3Q9UJU5 478 aaPredicted RBP6.45□□□□□ -1.38
SDCBPP3-201ENST00000419629 ZAR1Q86SH2 424 aa6.44□□□□□ -1.38
SDCBPP3-201ENST00000419629 SNX29Q8TEQ0 813 aa6.44□□□□□ -1.38
SDCBPP3-201ENST00000419629 GATA6Q92908 595 aa6.44□□□□□ -1.38
SDCBPP3-201ENST00000419629 METTL22Q9BUU2 404 aaPredicted RBP6.44□□□□□ -1.38
SDCBPP3-201ENST00000419629 PRKAG2Q9UGJ0 569 aa6.44□□□□□ -1.38
SDCBPP3-201ENST00000419629 TIMELESSQ9UNS1 1208 aa6.44□□□□□ -1.38
SDCBPP3-201ENST00000419629 SSFA2P28290 1259 aa6.43□□□□□ -1.38
SDCBPP3-201ENST00000419629 GSTM4Q03013 218 aa6.43□□□□□ -1.38
SDCBPP3-201ENST00000419629 VSIG10LQ86VR7 867 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms