RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 SUCLG2Q96I99 432 aa17.84■□□□□ 0.45
LINC01006-202ENST00000418309 PAPPA2Q9BXP8 1791 aa17.84■□□□□ 0.45
LINC01006-202ENST00000418309 IRS2Q9Y4H2 1338 aa17.83■□□□□ 0.44
LINC01006-202ENST00000418309 AKAP11Q9UKA4 1901 aa17.83■□□□□ 0.44
LINC01006-202ENST00000418309 E9PSI1 815 aa17.83■□□□□ 0.44
LINC01006-202ENST00000418309 NBPF7P0C2Y1 421 aaPredicted RBP17.83■□□□□ 0.44
LINC01006-202ENST00000418309 DLGAP5Q15398 846 aa17.83■□□□□ 0.44
LINC01006-202ENST00000418309 APOBEC3FQ8IUX4 373 aaKnown RBP17.83■□□□□ 0.44
LINC01006-202ENST00000418309 CSRNP1Q96S65 589 aa17.83■□□□□ 0.44
LINC01006-202ENST00000418309 RNF186Q9NXI6 227 aa17.83■□□□□ 0.44
LINC01006-202ENST00000418309 JAG2Q9Y219 1238 aa17.83■□□□□ 0.44
LINC01006-202ENST00000418309 IL1R1P14778 569 aa17.82■□□□□ 0.44
LINC01006-202ENST00000418309 DGKZQ13574 1117 aa17.82■□□□□ 0.44
LINC01006-202ENST00000418309 PRKG1Q13976 671 aa17.82■□□□□ 0.44
LINC01006-202ENST00000418309 CERS5Q8N5B7 392 aa17.82■□□□□ 0.44
LINC01006-202ENST00000418309 SAGE1Q9NXZ1 904 aa17.82■□□□□ 0.44
LINC01006-202ENST00000418309 A0A1B0GUL6 1792 aa17.81■□□□□ 0.44
LINC01006-202ENST00000418309 REM2Q8IYK8 340 aaPredicted RBP17.81■□□□□ 0.44
LINC01006-202ENST00000418309 PUS3Q9BZE2 481 aaKnown RBP17.81■□□□□ 0.44
LINC01006-202ENST00000418309 MCOLN1Q9GZU1 580 aa17.81■□□□□ 0.44
LINC01006-202ENST00000418309 PTPRCP08575 1304 aa17.8■□□□□ 0.44
LINC01006-202ENST00000418309 RBM5P52756 815 aaKnown RBP eCLIP17.8■□□□□ 0.44
LINC01006-202ENST00000418309 UBE4AQ14139 1066 aa17.8■□□□□ 0.44
LINC01006-202ENST00000418309 CFAP100Q494V2 611 aa17.8■□□□□ 0.44
LINC01006-202ENST00000418309 ARMC9Q7Z3E5 817 aa17.8■□□□□ 0.44
LINC01006-202ENST00000418309 SSH1Q8WYL5 1049 aa17.8■□□□□ 0.44
LINC01006-202ENST00000418309 KAZALD1Q96I82 304 aa17.8■□□□□ 0.44
LINC01006-202ENST00000418309 ZBED3Q96IU2 234 aaPredicted RBP17.8■□□□□ 0.44
LINC01006-202ENST00000418309 BICC1Q9H694 974 aaKnown RBP17.8■□□□□ 0.44
LINC01006-202ENST00000418309 U3KPZ7 1027 aaPredicted RBP17.8■□□□□ 0.44
LINC01006-202ENST00000418309 UTYO14607 1347 aa17.79■□□□□ 0.44
LINC01006-202ENST00000418309 MYO1BO43795 1136 aa17.79■□□□□ 0.44
LINC01006-202ENST00000418309 HIBADHP31937 336 aaKnown RBP17.79■□□□□ 0.44
LINC01006-202ENST00000418309 FKBP1AP62942 108 aaKnown RBP17.79■□□□□ 0.44
LINC01006-202ENST00000418309 SLFN5Q08AF3 891 aa17.79■□□□□ 0.44
LINC01006-202ENST00000418309 GYG1P46976 350 aa17.78■□□□□ 0.44
LINC01006-202ENST00000418309 MKRN3Q13064 507 aaKnown RBP17.78■□□□□ 0.44
LINC01006-202ENST00000418309 MTMR14Q8NCE2 650 aa17.78■□□□□ 0.44
LINC01006-202ENST00000418309 DEFB129Q9H1M3 183 aa17.78■□□□□ 0.44
LINC01006-202ENST00000418309 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.78■□□□□ 0.44
LINC01006-202ENST00000418309 RIPOR2Q9Y4F9 1068 aa17.78■□□□□ 0.44
LINC01006-202ENST00000418309 PCDHAC2Q9Y5I4 1007 aa17.78■□□□□ 0.44
LINC01006-202ENST00000418309 MROH5Q6ZUA9 1318 aa17.77■□□□□ 0.44
LINC01006-202ENST00000418309 CLRN2A0PK11 232 aa17.77■□□□□ 0.44
LINC01006-202ENST00000418309 PTPN12Q05209 780 aaKnown RBP17.77■□□□□ 0.44
LINC01006-202ENST00000418309 VPS37DQ86XT2 251 aa17.77■□□□□ 0.44
LINC01006-202ENST00000418309 FAM84BQ96KN1 310 aaPredicted RBP17.77■□□□□ 0.44
LINC01006-202ENST00000418309 VEZTQ9HBM0 779 aa17.77■□□□□ 0.44
LINC01006-202ENST00000418309 ANGEL1Q9UNK9 670 aaKnown RBP17.77■□□□□ 0.44
LINC01006-202ENST00000418309 SPDYE2BA6NHP3 402 aa17.76■□□□□ 0.43
LINC01006-202ENST00000418309 SPDYE6P0CI01 402 aa17.76■□□□□ 0.43
LINC01006-202ENST00000418309 LRRC24Q50LG9 513 aa17.76■□□□□ 0.43
LINC01006-202ENST00000418309 METTL24Q5JXM2 366 aa17.76■□□□□ 0.43
LINC01006-202ENST00000418309 MFSD14BQ5SR56 506 aa17.76■□□□□ 0.43
LINC01006-202ENST00000418309 TDRD7Q8NHU6 1098 aaKnown RBP17.76■□□□□ 0.43
LINC01006-202ENST00000418309 CDCA7LQ96GN5 454 aa17.76■□□□□ 0.43
LINC01006-202ENST00000418309 PRMT6Q96LA8 375 aaPredicted RBP17.76■□□□□ 0.43
LINC01006-202ENST00000418309 FAM205AQ6ZU69 1335 aa17.75■□□□□ 0.43
LINC01006-202ENST00000418309 FRAT2O75474 233 aaPredicted RBP17.75■□□□□ 0.43
LINC01006-202ENST00000418309 RABL6Q3YEC7 729 aaPredicted RBP17.75■□□□□ 0.43
LINC01006-202ENST00000418309 ANKRD44Q8N8A2 993 aa17.75■□□□□ 0.43
LINC01006-202ENST00000418309 USP44Q9H0E7 712 aa17.75■□□□□ 0.43
LINC01006-202ENST00000418309 SMC4Q9NTJ3 1288 aa17.75■□□□□ 0.43
LINC01006-202ENST00000418309 TTF2Q9UNY4 1162 aaKnown RBP17.75■□□□□ 0.43
LINC01006-202ENST00000418309 FZD1Q9UP38 647 aa17.75■□□□□ 0.43
LINC01006-202ENST00000418309 PPP1R12BO60237 982 aaPredicted RBP17.74■□□□□ 0.43
LINC01006-202ENST00000418309 ALDH1L2Q3SY69 923 aa17.74■□□□□ 0.43
LINC01006-202ENST00000418309 CAVIN4Q5BKX8 364 aa17.74■□□□□ 0.43
LINC01006-202ENST00000418309 IQSEC3Q9UPP2 1182 aaPredicted RBP17.74■□□□□ 0.43
LINC01006-202ENST00000418309 PPP2R3BQ9Y5P8 575 aa17.74■□□□□ 0.43
LINC01006-202ENST00000418309 COL1A1P02452 1464 aaPredicted RBP17.74■□□□□ 0.43
LINC01006-202ENST00000418309 ECM29Q5VYK3 1845 aa17.73■□□□□ 0.43
LINC01006-202ENST00000418309 TBC1D8O95759 1140 aa17.73■□□□□ 0.43
LINC01006-202ENST00000418309 CHAF1AQ13111 956 aaPredicted RBP17.73■□□□□ 0.43
LINC01006-202ENST00000418309 SUPT20HL1Q3ZLR7 823 aa17.73■□□□□ 0.43
LINC01006-202ENST00000418309 LDLRAD1Q5T700 205 aa17.73■□□□□ 0.43
LINC01006-202ENST00000418309 KLHDC4Q8TBB5 520 aa17.73■□□□□ 0.43
LINC01006-202ENST00000418309 SLC10A4Q96EP9 437 aa17.73■□□□□ 0.43
LINC01006-202ENST00000418309 PDE8BO95263 885 aa17.72■□□□□ 0.43
LINC01006-202ENST00000418309 TM4SF4P48230 202 aa17.72■□□□□ 0.43
LINC01006-202ENST00000418309 SREBF2Q12772 1141 aa17.72■□□□□ 0.43
LINC01006-202ENST00000418309 FBXO33Q7Z6M2 555 aa17.72■□□□□ 0.43
LINC01006-202ENST00000418309 RASA3Q14644 834 aa17.71■□□□□ 0.43
LINC01006-202ENST00000418309 NBPF12Q5TAG4 269 aaPredicted RBP17.71■□□□□ 0.43
LINC01006-202ENST00000418309 SPRYD7Q5W111 196 aa17.71■□□□□ 0.43
LINC01006-202ENST00000418309 TDRD3Q9H7E2 651 aaKnown RBP17.71■□□□□ 0.43
LINC01006-202ENST00000418309 SERPINA10Q9UK55 444 aa17.71■□□□□ 0.43
LINC01006-202ENST00000418309 AOX1Q06278 1338 aa17.71■□□□□ 0.42
LINC01006-202ENST00000418309 TNFAIP1Q13829 316 aa17.7■□□□□ 0.42
LINC01006-202ENST00000418309 DZIP1LQ8IYY4 767 aaKnown RBP17.7■□□□□ 0.42
LINC01006-202ENST00000418309 ZNF70Q9UC06 446 aaPredicted RBP17.7■□□□□ 0.42
LINC01006-202ENST00000418309 IFIT1P09914 478 aaKnown RBP17.69■□□□□ 0.42
LINC01006-202ENST00000418309 CRKP46108 304 aa17.69■□□□□ 0.42
LINC01006-202ENST00000418309 IREB2P48200 963 aaKnown RBP17.69■□□□□ 0.42
LINC01006-202ENST00000418309 BCAMP50895 628 aa17.69■□□□□ 0.42
LINC01006-202ENST00000418309 MLLT1Q03111 559 aaPredicted RBP17.69■□□□□ 0.42
LINC01006-202ENST00000418309 MAP3K11Q16584 847 aa17.69■□□□□ 0.42
LINC01006-202ENST00000418309 CTU1Q7Z7A3 348 aaKnown RBP17.69■□□□□ 0.42
LINC01006-202ENST00000418309 TRMT2AQ8IZ69 625 aaKnown RBP17.69■□□□□ 0.42
LINC01006-202ENST00000418309 VGLL2Q8N8G2 317 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms